Paenarthrobacter sp. R1: QN084_06050
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Entry
QN084_06050 CDS
T10646
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
phrz Paenarthrobacter sp. R1
Brite
KEGG Orthology (KO) [BR:
phrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phrz03032
]
QN084_06050 (topA)
03400 DNA repair and recombination proteins [BR:
phrz03400
]
QN084_06050 (topA)
Enzymes [BR:
phrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QN084_06050 (topA)
DNA replication proteins [BR:
phrz03032
]
Prokaryotic type
DNA Topoisomerases
QN084_06050 (topA)
DNA repair and recombination proteins [BR:
phrz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QN084_06050 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WIV32170
LinkDB
All DBs
Position
complement(1280057..1282777)
Genome browser
AA seq
906 aa
AA seq
DB search
MPSKAKTGKKLVIVESPAKSKTIAKYLGEGFIVEASIGHIRDLPQPSDLPAELKKTSLGK
FAVDVEHDFKPYYVVSPDKKKKVAELKAQLKDADALYLATDGDREGEAIAWHLLEVLKPK
VPVYRMTFGEITKEAIHRAMDNLRDVDTALVDAQETRRILDRLYGYEISPVLWRKVARGL
SAGRVQSVVTRMVVDRERERMAFKAASYWDLTGQFGAESGSFKAKLAAVDGSKVATGRDF
NDDGQLVSSNVVHLNEELATSLAAGLENADFKVRSVDTKPYTRRPAAPFTTSTLQQEAGR
KLRFSSKSTMQVAQRLYENGYITYMRTDSSALSDEAVTAARRQAAELYGPEFVPQSPRIY
ANKAANAQEAHEAIRPAGDSFRTPAQVAKQLSGDEFRLYELIWKRTVASQMADAKGSTAT
IRLGAVAADGRDAEFSASGTVITFPGFLAAYEEGKDEGRGDDDSDDARRLPNVAKDDSLT
ASDIVAVGHETSPPPRYTEASLTAELEKRGIGRPSTYASTISTIQDRGYVRKQGSALVPS
WIAFSVIRLLEQHFTDYVDYEFTADMEGDLDKIANGQAVGAAWLKHFYYGEDADPGLLSI
VNNLGEIDAREINSVPIADGITLRVGKFGPYLESTIPTVDEKTGEVVESARANVPEELAP
DELTAAKAIELMETAAPEERVLGTDPHTGHTVVAKNGRYGAYVTEIIPEMTEEQLANQPV
EYYKNGKPKPPKKPVKVKPRTGSLFKSMSVDTVTLDEALQLMSLPRVLGEDAEGNPITVQ
NGRFGPYLKKGTDSRSIGSEEEIFTITLEQALEIYSQPKQRGARAAVPPLAEFGPDPVSE
KNIVVKEGRFGPYITDGVTNITVPRSTSLEELTRERAIELLAEKRAKGPVKRTTRKAPAR
KAAAKK
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagcaaggcaaaaaccggcaagaaactcgtgatcgtggagtctccggccaagagc
aagaccatcgccaagtaccttggcgaaggcttcatcgtcgaggcttccattggtcacatc
cgtgaccttccgcagccgtccgacctccctgcagaactcaagaagacctcgctgggcaag
ttcgctgttgacgttgagcacgacttcaagccgtactacgtcgtctccccggacaagaag
aaaaaggtcgccgaactcaaggcccagctgaaagacgccgacgcgctttacctcgcaacc
gacggggaccgcgaaggcgaagccatcgcgtggcacctccttgaggtcctgaagcccaaa
gttccggtctaccgcatgaccttcggtgaaatcaccaaggaagcaatccaccgcgcgatg
gacaacctgcgcgacgtggacacggccctcgttgatgcgcaggaaacccgacggatcctg
gacaggctgtacggctacgaaatatcgcctgtgctgtggcgcaaggttgcccgcggcctt
tccgcaggacgcgtgcagtccgtggtgacccggatggtggttgaccgtgaacgtgagcgc
atggcgttcaaggccgcttcctactgggacctgacgggccaattcggcgccgagtcgggc
tccttcaaggccaagcttgctgccgtcgacggctccaaggttgccaccggccgcgatttc
aatgacgacggccagctggtctcctcgaacgtggtccacctcaacgaggaactagccacc
tcccttgctgccggcctggagaacgcggacttcaaggtccgctccgtggacaccaagccg
tacacccgccgtcccgccgccccgttcaccacttccacgctgcagcaggaagccggccgt
aagctcaggttctcctccaagagcaccatgcaggttgcgcagcgcctctatgaaaacggc
tacatcacctatatgcgtacggactcctcggcgttgagcgacgaggccgtcacggccgcg
cgtcgccaggctgctgagctctacggtcccgaattcgtgccgcagagtccgcggatctac
gcgaacaaggccgcgaacgcccaggaagcgcacgaggctatccgcccggccggtgactcc
ttccgcaccccggcccaggtggccaagcagctcagcggagacgagttccggctgtacgaa
ctcatttggaagcgcaccgtggcctcccagatggcagatgccaagggctccacggcaacc
atccgccttggcgcagttgcagcggacggccgggacgccgagttctctgcttccggtacc
gtgatcaccttccccggcttccttgccgcctatgaggaaggcaaggacgagggccgcggc
gatgacgactcggacgacgcccgccgcctgccgaacgtggccaaggacgattcccttacc
gcctcggatattgttgcggttggccacgagacatctccgccgccgaggtacaccgaagcg
tcattgaccgctgaactggaaaagcgaggcattggacgcccgtctacctacgcttcgacc
atttccaccatccaggaccgcggctacgtccgcaaacaaggttccgcgctggtacccagc
tggatcgccttctctgtgatccgcctgctggaacagcacttcaccgactatgtggactac
gaattcaccgctgacatggaaggcgacctggacaagatcgccaacgggcaagcggtgggc
gcagcatggctgaagcacttctactacggagaagatgccgatcccggcctgttgagcatc
gtcaacaacctcggcgagatcgacgcccgcgagatcaactccgtgccgatcgcagacggc
atcacgctgcgggtgggtaagttcggcccgtaccttgagagcaccatccccacggtcgat
gagaaaaccggggaggtcgtggagtccgcgcgggccaatgttcccgaggaactggccccg
gatgagctgacggccgccaaggccatcgagctcatggaaacggcggcacccgaggaacgg
gtcctgggaacagatccgcacaccgggcacacagttgtagccaagaacggccgctacggc
gcttacgtcaccgagatcatcccggaaatgacggaagaacagctcgccaatcagccggtt
gagtattacaagaacggcaagccgaagccgcccaagaagcctgtgaaggtcaagccccgc
accggctcgctgttcaagtccatgtccgtggacaccgtcacgctggacgaagctttgcag
ctgatgagcctgccacgggtcctcggcgaggacgcggaaggcaaccccatcaccgtgcag
aacggccgctttgggccttacctgaagaaggggacggactcgcgctccattggttcggag
gaggaaatcttcacgatcaccctggagcaggcgctggagatctattcgcagcccaagcag
cgtggcgcgcgtgcagcggtcccgccgctggctgagttcggtcccgatcccgtgtcggaa
aagaacatcgtggtgaaggaaggccgcttcggcccctacatcactgacggcgtcaccaac
attacggttccgcgttccacgtccttggaagagctcaccagggaacgggccatcgagctg
ctcgccgagaagcgcgccaagggcccggtgaaacggaccacccgcaaggcaccggcccgc
aaggcagcggcgaagaaatag
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