Paenarthrobacter sp. R1: QN084_07005
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Entry
QN084_07005 CDS
T10646
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
phrz Paenarthrobacter sp. R1
Brite
KEGG Orthology (KO) [BR:
phrz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
QN084_07005
Enzymes [BR:
phrz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
QN084_07005
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
WIV32350
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Position
complement(1454363..1456309)
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AA seq
648 aa
AA seq
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MATLAAAALAFTGVPLAQAATTQTAPGNAPAVVSAKKDQTPKRQVENLDRAPVAVLTDQG
VSVSWRMLGLDKDSIGFQVLRDGVNITPEPIRNSTFFVDPAGTATSSYVIKTVGNGQGQD
KLTEAVTPLAQNYLAIKLDKPADGVTPDGKAYTYSANDATVADLDGDGKYEVIQTWSPSN
AKDNSQSGYTGNVYVDAYKLDSTKLWRIDLGRNIRAGAHYTQVLAYDFDGDGKAEVSLKT
ADGTTDASGTVIGDANADYRNSAGYVLAGPEFLTVFKGGTGTILDTVAYEPERGLVASWG
DNYGNRVDRFLAAVAYLDGEHPSMMFSRGYYTRTVLVTYDLVDGKLVKRWTFDSNVAGDQ
YKGQGNHNLSVADVDQDGKDEFVFGSMTIDDNGQPLYNTKLGHGDAIHTGDLDPSRPGLE
TFAVHESMSQSGNRGATFRDAATGEVLWSIPATKDTGRGAAGDIDPRYEGAEGWAVGGTA
AWDSPRGQLMSAKGELIAENIPAANFLAWWDGDLLREIVDHDYDATVSRGVPTISKWNWE
TETSDRLLTADGARSNNTTKGNPSIQADILGDWREEIAWPSTDSTELRIYTTTAPTEVRL
RTLMHDTVYRTAVARENVAYNQPPHPSFFVGEGMQPPAAPAVVYTGKK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctcgccgcggcagccctggccttcactggtgtgcccctcgcgcaagcggca
accacccaaacagcgccaggcaacgcacccgccgtcgtcagcgcgaagaaggaccaaacg
cccaagcggcaggtggaaaacctggaccgtgcgccggtggcggtcctgactgaccaaggc
gtgagtgtcagttggcgcatgctgggcctggacaaagacagcatcgggttccaagtgctg
cgcgacggcgtcaacatcacgcccgaacccatccgcaattcaaccttcttcgtggatcct
gcgggaacggccacctcaagctacgtcattaagacggtgggcaatggccaaggccaggac
aaactgaccgaggctgtcacgccgctggcccaaaactacctcgccatcaagctggacaag
ccggcggacggcgtcacccccgacggcaaggcttacacctactcggccaacgacgccacc
gtggcggacctcgacggtgacggcaagtatgaggtcatccagacatggtcgccctccaac
gcgaaggacaattcgcagtccggctacacgggcaacgtctatgtggacgcctacaagctg
gacagcaccaagctgtggcggatcgacctcggccgcaacattcgcgccggggcgcactac
acgcaggtcctggcgtacgacttcgacggcgacggcaaggccgaggtttcgctcaagacg
gcggatggcaccacggatgcttcaggcacagtgatcggcgacgccaacgccgactaccgc
aacagcgccggctacgtgctggccggcccggagttcctcacggtgttcaagggcgggacg
ggaaccatcctggacactgtcgcttatgagcctgagcgcggcttggtggccagctggggc
gataactacggcaaccgcgtggatcgtttcctggcagccgtcgcgtacctggacggcgag
cacccgtccatgatgttcagccgcggctactacacccgtacggtgctggtgacttatgac
ctggttgacggcaagctcgtgaagcgctggaccttcgattccaacgtggcgggcgaccaa
tacaagggccagggcaatcacaacctatccgtggctgacgttgaccaggacggcaaggac
gagttcgtcttcggttccatgaccatcgacgacaatggccagcccctctacaacaccaag
ctcggccacggcgacgcgatccacacgggcgatctggatccctcgcggcccggcctggaa
accttcgccgtccacgagagcatgagccagagcggcaaccgtggcgccacgttccgggac
gctgccaccggcgaggtgctgtggagcatcccggccaccaaggacaccgggcgtggagct
gcgggcgacatcgatccccgctatgaaggggccgaaggatgggccgtaggcgggacggcg
gcgtgggattctccgcggggccagttgatgtccgccaagggcgagctgatcgcggagaat
atccccgccgcgaacttccttgcctggtgggatggcgacctgctgcgtgaaatcgtggac
cacgactacgacgccaccgtgtcccgcggcgtccccactatctccaagtggaactgggaa
accgagaccagcgatcgcttgctgaccgccgatggcgcccgcagcaacaacaccaccaag
ggcaacccgtccatccaggcggacatcctgggtgattggcgcgaggaaatcgcctggccg
tccacggacagcacggagctgcggatctacaccaccacggctcccaccgaggttcgcctg
cggaccctgatgcacgacaccgtgtaccgaacggcggtcgcccgcgagaacgtggcgtac
aaccagccgccgcacccgagcttctttgtgggtgagggcatgcagcctccggcagcaccc
gccgtcgtctataccggcaagaagtaa
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