Paenarthrobacter sp. R1: QN084_16155
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Entry
QN084_16155 CDS
T10646
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
phrz Paenarthrobacter sp. R1
Pathway
phrz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phrz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QN084_16155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phrz03019
]
QN084_16155
03400 DNA repair and recombination proteins [BR:
phrz03400
]
QN084_16155
Enzymes [BR:
phrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QN084_16155
Messenger RNA biogenesis [BR:
phrz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QN084_16155
DNA repair and recombination proteins [BR:
phrz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QN084_16155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HTH_Crp_2
P-loop_SecA
DUF3553
MarR_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WIV29852
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All DBs
Position
3330234..3331928
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AA seq
564 aa
AA seq
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MSDESALAALAAESFSLDALRDGQLAAMSALAEGRDVLAVMPTGYGKSATYQVAALYLHQ
QQQKLHGRTGGPAVVVSPLIALQEDQLEGLNRHLGEGAAVAVNSAHSDADVEAAWDAVES
GKAVYLFLAPEQLAKQETVERIARLDLTLLVVDEAHCVSSWGHDFRPDYLNLGNVRESLG
NPPVAALTATASPPVRDEIVERLGMQDPLILVRGFDRPNISLEVVRHHEDKAKRKAVLSQ
VASLTTSGQKGLVYAATRKDTEKYAAKLVAQGIRAEAYHAGRSASERELIHEQFLADDLD
VVVATTAFGMGIDKPNVRFVVHADIPESLDAYYQEIGRGGRDGDNARAVLHYRSEDLGLR
KFFGTHAPDQESLLAVLKVLKNAGAPATKKVLAELTGFPPRRVTALVNQLEEADAVKVGK
RGVRLASKAKLRSLVAHAVELAEARQRVDHSRLTMMRAYAETDSCRRQFLLGYFGEELAK
ACGNCDVCTEAANHPDVRPTGKETPDAGASPDPFPLQSAVIHKEWGPGLVMRHEDDVITV
LFEHEGYKTLSRSTVMEHELLRPA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgaatcagccctggccgcgctcgcggccgaatccttctcgctggatgcactc
agggatgggcaactggccgccatgagcgcgctcgccgaaggacgcgacgtccttgccgtg
atgcccaccggatatggcaagtccgccacataccaggtcgccgccttgtacctgcaccag
cagcaacagaaactgcacggccgaaccgggggacccgccgtcgtggtttctccgttgatc
gccttgcaggaagaccagttggagggcctcaacaggcacctgggcgagggcgccgccgtc
gcggtcaactcggcccacagcgacgcggacgtggaagctgcatgggacgcggtggagtcc
gggaaggcggtctatcttttcctggctcctgagcagttggccaagcaggagacggtggag
cggatcgcgcggttggacctcaccctgctggtagtggacgaggcccattgcgtttcatcg
tggggacacgacttccggcccgactacctcaacctcggcaacgtccgtgaaagcctgggg
aacccgcccgtcgcggccctgacagcaacggcttccccgcccgtgcgggacgagattgtt
gagcgcctgggcatgcaggatccattgatcctggtccggggcttcgaccgtcccaacatc
agcctggaagtagtccgccaccacgaggacaaagccaagcggaaggccgtgctgtcccag
gttgcgtcgttgacgacgtcgggacagaagggcttggtgtacgcggccacccgcaaggac
acggagaagtacgcagccaagctggtggcgcagggaatccgtgccgaggcctaccacgca
ggccgttccgcatccgagcgcgaactcatccacgaacagttcctggccgatgacctcgat
gtagtggttgccacgacggcgtttggcatgggcatcgacaagcccaacgtcaggtttgtg
gtgcacgccgatatccccgagtccctcgatgcctactaccaggagattggccggggcggc
agggacggggacaatgcgagggcagtgctgcactaccggtccgaggacctcggcctgcgc
aagttcttcggcacccatgctccggaccaggagtccctcctcgccgtgctgaaggtcctg
aagaacgcgggggcgccggcaaccaagaaggtcctggccgagctgaccgggttcccgccg
aggcgcgttactgccttggtgaaccagctggaggaagccgacgcggtgaaggtgggcaag
cgcggcgtccggcttgcctccaaagcgaagctgcggtccctggtggcccacgccgtcgag
ctggccgaagcacgccagcgcgtggaccattcccgcctcaccatgatgcgcgcgtacgcg
gagaccgacagctgccgccggcagttcctgctgggctacttcggggaagaactggcaaag
gcctgcggaaactgcgacgtctgtacagaagccgccaaccatcccgacgtgcggcccacc
ggcaaggaaacgcccgacgccggcgcctcgcctgatccgttcccgttgcagtccgcggtg
atccacaaggaatgggggccaggacttgtcatgcggcacgaagacgacgtcatcaccgtg
ctgttcgagcacgaaggatacaaaaccctgtcccgctcgaccgtcatggagcacgaactc
ctcaggcctgcctag
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