Paenarthrobacter sp. R1: QN084_16480
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Entry
QN084_16480 CDS
T10646
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
phrz Paenarthrobacter sp. R1
Pathway
phrz00260
Glycine, serine and threonine metabolism
phrz00630
Glyoxylate and dicarboxylate metabolism
phrz00670
One carbon pool by folate
phrz00785
Lipoic acid metabolism
phrz01100
Metabolic pathways
phrz01110
Biosynthesis of secondary metabolites
phrz01200
Carbon metabolism
Module
phrz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
phrz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QN084_16480 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QN084_16480 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
QN084_16480 (gcvP)
00670 One carbon pool by folate
QN084_16480 (gcvP)
Enzymes [BR:
phrz01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
QN084_16480 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WIV29914
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Position
3388404..3391250
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AA seq
948 aa
AA seq
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MTVSSASTAFVDRHIGARRQADIDTMLKAIGYDSVDSLVDTAVPNDIRQDVALTLQNALS
EVEVLAELRKLASKNKTAVQMIGQGYYDTITPPVIRRNILESPAWYTAYTPYQPEISQGR
LEALLNFQTMVQDLVGLPIANASLLDEATAVAEAVLMMRRANKNKAVQDGKTVLDADCLP
QTIAIVKGRAEALGFEVEVADLSAGLPDGDINGVVLQQPGVSGRVFDHSAVIAEAKERGA
LVTVAADLLSLTLITPPGEQGADIAVGSAQRLGVPLFFGGPHAAYMAVQKGLERSMPGRL
VGVSKDDAGVPAYRLALQTREQHIRREKATSNICTAQALLAIVASMYAVYHGPEGLKAIA
ETAHHHARTLAASLKAAGVEVLHGSFFDTITVRVPGRGAELVAAAEERGINLRGIDGDTV
GISVDETTTTDIVGSVLEVFGASAVESAEGFALEASVERSSEYLQHPVFNTHRSETQLLR
YIRKLSDRDLALDRTMIPLGSCTMKLNATAEMEAISWPEFASIHPFAPDSQTEGWRELIS
GLEADLTEITGYDQVSIQPNAGSQGELAGLLAIRGYHHSRGDQQRNVCLIPASAHGTNAA
SAVLAGMKVVVVATAADGTIDHADLQAKIEANRDVLSAIMITYPSTHGVYDADVREVCDA
VHEAGGQVYIDGANLNALVGLAQPGKFGGDVSHLNLHKTFCIPHGGGGPGVGPVAAKAHL
APFMPGNAASWTEGNDVPISASRFGSAGVLPISWAYVKLMGGEGLTEATKSALLAANYIA
ARLNDYFPVLYTGEAGLVAHECILDLRELTAKTGVTAEDVAKRLIDFGFHAPTLAFPVAG
TLMVEPTESEDLAEIDRFIEAMITIRKEIDQVAHGDFSVQDSPLRRAPHTAAAVVSSDWD
RAYPREQAAFPVHHLKQDKYFPPVGRIDGAAGDRNLVCSCPPIEDFEN
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
gtgacggttagttcagcctccaccgccttcgtcgatcggcacatcggtgcccgccgccag
gccgatatcgacaccatgctcaaggccatcggctacgactccgtggattccctcgtggac
accgcggttcccaacgacatccgccaggacgttgccctgacgctgcagaacgcgctgagc
gaggtggaggtccttgctgaactccgcaagcttgcttccaagaacaagactgctgtccag
atgatcggccagggctactacgacaccatcacgccgccggttatccgccgcaacattctc
gagtcgccggcctggtacaccgcctacacgccctaccagccggaaatttcccagggccgc
ctcgaagcgctgctgaacttccagaccatggtgcaggacctcgttggcctgccgatcgcc
aatgcttcgctccttgacgaagccaccgcagtcgctgaagccgtgctgatgatgcgccgt
gccaacaagaacaaagccgtccaggatggcaagaccgtcctcgacgcagactgcctgccg
cagaccatcgcgatcgtgaagggccgcgctgaggcgctcggcttcgaggtggaggttgcg
gacctctccgcgggactgcccgacggcgacatcaacggcgtcgtcctccagcagcccggc
gtctccggccgtgtcttcgaccactccgccgtcatcgccgaggcgaaagagcggggcgcg
ctggtgacggttgctgccgaccttctttccctcacgctcatcacccctccgggtgaacag
ggtgcggacatcgccgtcggctccgcccagcgactgggtgttccgctgttcttcggcggc
ccgcacgccgcttacatggcagtccagaaggggctggagcgttccatgcccggccgtctg
gtgggcgtttccaaggacgacgccggtgtccccgcctaccgcttggcgctgcagacccgc
gagcagcacatccgccgcgaaaaggccacgtccaacatctgcacggcgcaggcactcctt
gccatcgtcgcctcgatgtatgccgtctaccacggccccgaaggcctgaaggccatcgcc
gagaccgcccaccaccacgcgcgcacccttgcggcctcactgaaggctgccggcgtcgag
gtcctgcacgggtccttcttcgacaccatcacggttcgcgttccgggccgcggcgccgag
ctcgtcgctgctgccgaagagcgtggcatcaacctgcgtggaatcgacggggacaccgtg
ggtatctccgtggatgagacaacaacaactgacatcgtcggcagtgtccttgaagttttc
ggtgcctccgcggttgagtccgcagagggctttgcgctggaggcttccgttgagcgctcc
agtgagtacctgcagcaccccgtgttcaacacccaccgctccgaaacgcagctgttgcgc
tacatccgcaagctctccgatcgcgacctcgcgctggaccggaccatgattccgctgggt
tcgtgcaccatgaagctgaacgccacggcggagatggaagccatttcctggcccgagttc
gcctccatccacccgttcgctccggattcccagaccgagggctggcgtgagctgatctct
ggcctggaagctgacctgacggagatcacgggttacgaccaggtctccatccagccgaac
gcggggtcccagggtgagcttgccggcctgctggcgatccgcggctaccaccactcccgc
ggagaccagcagcgcaacgtctgcctcatccctgcttcggctcacgggaccaacgcagcg
tccgccgtgctcgcgggcatgaaggttgtggtagttgccacggcagccgacggcaccatc
gaccacgccgacctccaagccaagatcgaggcgaaccgtgacgtcttgtcggccatcatg
atcacctacccgtccacccacggtgtctacgacgccgacgtgcgggaagtctgcgacgct
gtccacgaagccggtggccaggtctacatcgacggtgcaaacctcaatgcactggtcggt
ttggcgcagccgggcaagttcggcggcgacgtgtcccacctgaacctgcacaagaccttc
tgcatcccccacggcggtggcgggccgggcgtcggccccgttgctgcgaaggcccacctg
gccccgttcatgcccggcaacgccgcatcatggaccgaaggcaatgacgttccgatttcg
gcatcgcgctttggttcggccggcgtgctccccatctcctgggcttacgtgaagctcatg
ggcggcgaaggactgaccgaagcaaccaagtccgccctgctggctgccaactacatcgca
gcccgcctcaacgactacttcccggtgctctacacaggcgaagcaggcttggtcgcccac
gagtgcatcctggacctccgcgagctgacggccaagaccggggttacggccgaggacgtg
gccaagcgcctcatcgacttcggcttccacgcacccaccctggcgttcccggtcgccggc
accctcatggttgagcccaccgaatccgaggacctggccgagatcgaccgcttcatcgaa
gccatgatcaccatccgcaaggaaatcgatcaggtagcacatggcgacttctccgtgcag
gattccccgcttcgccgggcaccccacacggcagccgccgtcgtaagctccgattgggac
cgcgcctacccgcgtgagcaggccgccttccccgtccaccacttgaagcaggacaagtac
ttcccgccggtgggccgcatcgatggcgcagcaggcgaccgcaacctcgtttgttcatgc
cctccgatcgaagacttcgagaactaa
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