Paenarthrobacter sp. R1: QN084_17635
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Entry
QN084_17635 CDS
T10646
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
phrz Paenarthrobacter sp. R1
Pathway
phrz00020
Citrate cycle (TCA cycle)
phrz00190
Oxidative phosphorylation
phrz00650
Butanoate metabolism
phrz00720
Other carbon fixation pathways
phrz01100
Metabolic pathways
phrz01110
Biosynthesis of secondary metabolites
phrz01120
Microbial metabolism in diverse environments
phrz01200
Carbon metabolism
Module
phrz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
phrz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
phrz_M00149
Succinate dehydrogenase, prokaryotes
phrz_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
phrz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
QN084_17635 (sdhA)
00650 Butanoate metabolism
QN084_17635 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
QN084_17635 (sdhA)
00720 Other carbon fixation pathways
QN084_17635 (sdhA)
Enzymes [BR:
phrz01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
QN084_17635 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
Thi4
DAO
GIDA
FAD_oxidored
DUF6020
Motif
Other DBs
NCBI-ProteinID:
WIV30128
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All DBs
Position
complement(3657038..3658837)
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AA seq
599 aa
AA seq
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MQVHKYDVVIVGAGGAGMRAAIESGQRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTIKGGDYLVDQDAAEVMAKEAIDAVLDLEKMGLPFNRTPEGRIDQRRFGGHT
RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHNVEFYNEYYVLDLLLVEEDAVREDGTP
YKQKRVAGVVSYDLASGELHVFQAKSVVFASGGAGKVFKTTSNAHTLTGDGMGIAFRRGI
PLEDMEFFQFHPTGLAGLGILLTEGARGEGAILRNSEGERFMERYAPTIKDLAPRDIVAR
AMANEVREGRGCGPNKDYVLLDLTHLEPAHIEAKLPDITEFARTYLGVEPFTDPVPVFPT
AHYAMGGIPTNITTEVLQDNDTTVPGLYAAGEVACVSVHGSNRLGTNSLLDINVFGKRAG
IAAAEYSKTADFVELPENPEAMTRGILDSLLSGTGTERVAQIRKELQDTMDANMQVFRTK
ESLEQVLRDIASFEERYKNVTVQDKGKRFNLDLLEAVELGFLLDMAKVMTVGALHREESR
GGHYREDFPDRDDEKFMKHSMAYLDNTVTADSSAESVAGIRLETKPVVFTRYEPMERKY
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtccataagtacgacgtcgttattgtcggtgcaggtggcgccggcatgcgcgcc
gcgatcgaatccggtcagcgtgcacgcaccgcggtactgaccaagctctaccccacccgc
tcgcacacaggtgcagcccagggtggcatgtgtgcagcactggccaacgtcgaggaagac
aactgggagtggcacaccttcgacaccatcaagggtggcgactacctggttgaccaggac
gcagccgaggtcatggccaaggaagccatcgacgccgtgctggacctggaaaagatgggc
ctgcccttcaaccgcacgcccgaaggccggatcgaccagcgccgcttcggtggccacacc
cgcgaccacggcaaggctcctgtccgccgcgcctgctacgcagcagaccgtacgggccac
atgatcctgcagacgctgtaccaaaactgcgtcaagcacaacgttgagttctacaacgag
tactacgtccttgacctgctgctggttgaggaagatgccgttcgcgaagacggcacgccc
tacaagcagaagcgcgttgccggcgtcgtctcctacgatctcgcttccggtgagctgcac
gtcttccaggccaagtccgtggtgttcgcctccggcggcgcgggcaaggtcttcaagacc
acgtccaacgcacacaccctgaccggtgacggcatgggcatcgcattccgccgcggtatc
cccctggaagacatggagttcttccagttccacccgaccggcctcgccggcttgggcatc
ctcctcaccgaaggtgcccgcggtgagggtgccatcctgcgtaactccgagggtgagcgc
ttcatggagcgttacgcccccaccatcaaggaccttgcgccccgcgacatcgtggcccgc
gccatggccaacgaagtccgtgaaggccgcggctgcggcccgaacaaggactacgtcctc
cttgacctgacgcaccttgagcccgcgcacatcgaagcgaagctgccggacattaccgag
ttcgcccgcacctaccttggtgttgaaccgttcacggatcccgtgccggtgttccccacg
gcccactacgccatgggcggcatccccacgaacatcaccaccgaggtcctgcaggacaac
gacaccactgttcccggcctgtacgccgccggtgaagtggcctgcgtttcggtccacggc
tccaaccgccttggcaccaactcgctcctggacatcaacgtgttcggcaagcgtgcaggc
attgcggccgcggagtactccaagaccgcggactttgttgaactcccggagaacccggaa
gcaatgacccgcggaatcctggacagcctgctcagcggtaccggcaccgagcgtgtggcc
cagatccgcaaggaactgcaggacaccatggatgccaacatgcaggtgttccgtaccaag
gaatccctggagcaggtcctccgcgacatcgcttccttcgaggagcggtacaagaacgtc
accgttcaggacaagggcaagcgcttcaacctggacctcctggaagccgttgaacttggc
ttcctgctcgacatggccaaggtcatgactgtcggtgccctgcaccgtgaggaatcccgt
ggcggccactaccgcgaggacttcccggaccgcgacgacgaaaagttcatgaagcactcc
atggcttacctggacaacaccgtcaccgccgactcgtctgccgagtccgttgcgggcatc
cgtcttgagaccaagcccgttgtcttcacccgttacgagccaatggagcgtaagtactaa
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