Paenarthrobacter sp. R1: QN084_19070
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Entry
QN084_19070 CDS
T10646
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
phrz Paenarthrobacter sp. R1
Pathway
phrz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phrz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QN084_19070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phrz03019
]
QN084_19070
03016 Transfer RNA biogenesis [BR:
phrz03016
]
QN084_19070
Enzymes [BR:
phrz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QN084_19070
Messenger RNA biogenesis [BR:
phrz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QN084_19070
Transfer RNA biogenesis [BR:
phrz03016
]
Prokaryotic type
tRNA degradation factors
QN084_19070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_PNO1_2nd
KH_2
PCB_OB
S1_RRP5
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
WIV30387
LinkDB
All DBs
Position
3997144..3999393
Genome browser
AA seq
749 aa
AA seq
DB search
MEGPEIQFSEATIDNGRFGKRVIRFETGRLAKQAAGASMVYIDDDTALLSATTAGKQPRE
GFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLMDRPLRPAFVKGLRNEVQ
IVVTVLAINPDELYDVVAINASSMSTQLSGLPFSGPIGGVRVALIADEQGSQWVAFPKHS
QLENAVFNMVVAGRVAGDDVAIMMVEAEATDNSWDLIKEQGATAPTEEVVSEGLEAAKPF
IKALCDAQADLAARAAKPTVEFPVFLDYQDDAYAAVEAAAAEKLAAVFQIADKQERDNAS
DELKDEVLGSLAGEFEGREKELSAAFRSVTKHVVRQRILKDQIRIDGRGLTDIRQLTAEV
EVLPRVHGSAIFERGETQIMGVTTLNMLKMEQQIDSLSPVTRKRYMHNYNFPPYSTGETG
RVGSPKRREIGHGALAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTLSML
NAGVPLKAPVAGIAMGLVSDQVDGQTRYAALTDILGAEDAFGDMDFKVAGTSEFVTAIQL
DTKLDGIPASVLAAALKQAREARLHILEVINAAIDTPDELSEFAPRVIAVKIPVDKIGEV
IGPKGKMINQIQEDTGADISIEDDGTVYIGATNGPSADAARSAINAIANPQVPEVGERYL
GTVVKTTTFGAFVSLTPGKDGLLHISELRKLANGKRVDNVDDVVSVGQKVQVEITKIDDR
GKLSLSPVVAEEEAASGDAPAETAEESAE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgaaatccagttctcagaagccacaatcgacaacggccgcttcggcaag
cgcgttatccgcttcgaaaccggccgcctcgccaagcaggctgccggcgcgtcgatggtg
tacatcgacgacgacaccgcgcttctctccgcaaccaccgcaggcaagcagccgcgcgaa
ggtttcgacttcttcccgctgaccgttgacgtcgaagagcgcatgtacgctgccggacgc
atcccgggttcgttcttccgccgcgaaggccgtccttccacggaagccatcctggcctgc
cgcctgatggaccgcccgctgcgcccggccttcgtcaaggggctccgcaacgaggttcag
atcgtcgttaccgtcctggccatcaacccggatgagctctacgacgtcgttgccatcaac
gcttcttccatgtccacgcagctgtccggcctgccgttctccggtccgatcggcggcgtc
cgcgttgcgctcatcgccgacgagcagggttcccagtgggtggccttccccaagcactcc
cagcttgagaacgccgtcttcaacatggttgttgccggccgcgtagccggtgacgacgtc
gccatcatgatggtcgaggcagaagccacggacaactcctgggacctcatcaaggaacag
ggcgctaccgctcccaccgaagaggttgtctccgagggccttgaggctgccaagccgttc
atcaaggcactgtgcgatgcgcaggcagacctggcagcccgcgctgccaagccgaccgtt
gagttccccgtcttccttgactaccaggacgacgcttacgccgctgtcgaggccgctgcg
gccgagaagctcgccgccgtcttccagatcgcggacaagcaagaacgcgacaacgcctcc
gacgaactcaaggacgaagtcctgggctcgctcgccggcgaattcgaaggccgcgagaag
gaactgtccgcagcattccgttcggtcaccaagcacgtcgtccgccagcgcatcctgaag
gaccagatccgcatcgacggccgtggcctgacggacatccgccagctgaccgccgaggtt
gaagttctgccccgcgtgcacggttcggccatcttcgagcgcggcgagacccagatcatg
ggtgtcaccacgctgaacatgctgaagatggaacagcagatcgattcgttgtcgccggtg
acgcgcaagcgctacatgcacaactacaacttcccgccgtactccaccggtgaaaccggc
cgcgtgggttccccgaagcgccgcgaaatcggccacggtgcactcgctgagcgcgccctg
gttccggtcctgcccagccgcgaggaattcccgtacgccatccgccaggtatccgaggcc
cttggctccaacggttccacctccatgggctcggtgtgtgcttcgacgctctccatgctg
aacgccggcgtgccgctgaaggctcccgtggcaggcattgccatgggcctcgtttcggac
caggttgacggccagacccgctacgcagccttgaccgatatcctcggtgccgaagacgcc
ttcggcgacatggacttcaaggttgccggtacctccgagttcgtcacggccatccagctg
gacaccaagctcgacggtatcccggcatcggtcctggcagcagccctgaagcaggcccgc
gaagcccgcctccacatcctcgaggtcatcaacgccgcgatcgacaccccggacgagctc
tccgagttcgcaccgcgcgtcatcgccgtgaagatccccgtggacaagatcggtgaagtc
atcggccccaagggcaagatgatcaaccagatccaggaagacaccggcgcggatatctcc
atcgaggacgacggcacggtctacatcggcgcgacgaacggcccgtctgcagacgcagca
cgctcggctatcaatgccatcgccaacccgcaggttcccgaggtcggcgaacgctacctg
ggcaccgtggtgaagaccaccacgttcggcgcttttgtctccttgactccgggcaaggac
ggcctcctgcacatctccgaactccgcaagctggccaacggcaagcgtgtggacaacgtt
gatgatgttgtttccgtgggccagaaggtccaggttgagatcaccaagatcgacgaccgc
ggcaagctctccctctccccggttgtggccgaggaagaagcagcttccggcgacgcaccg
gcggagaccgctgaagagtccgcagagtag
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