Paenarthrobacter sp. R1: QN084_21160
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Entry
QN084_21160 CDS
T10646
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
phrz Paenarthrobacter sp. R1
Brite
KEGG Orthology (KO) [BR:
phrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phrz03000
]
QN084_21160
Transcription factors [BR:
phrz03000
]
Prokaryotic type
Helix-turn-helix
Other families
QN084_21160
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GFIT
Motif
Pfam:
AAA_lid_14
HTH_8
Sigma54_activ_2
AAA_22
Sigma54_activat
AAA
HTH_30
nSTAND3
TsaE
Motif
Other DBs
NCBI-ProteinID:
WIV30776
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Position
4445277..4446998
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AA seq
573 aa
AA seq
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MQPHADLSGIRPIVARSWYRSRAAGVDAFADRGFYDEGRVDEYTIAAAGPHLQKLDEVAA
DLGGYVNITAPNGVLVKADFLRDDGFPAGYSLLEESCGSNGEGLALEEGRGVWLAPEEHF
REDMRGNWCFASLVRDPFHNRVRAVIGLTLPANRVPSLEPSSTLLMLEGVASRIERDIEV
RTSSKERALLSEYLRVSRRRGNRPVIAVDGKNSLQNAAATATLADNDFSIISGYAKAVMS
SGRDMNCEVMLQGPGVSTLEISPVTLSAANVGAIVVVRPHAPGKEQRAGAARGALTLEAP
PQPTAERLLKHLNGTSTEFKRTLNLARKAVDQDRSVVLIGELGSGKLRLANAIASLRGGQ
MVVDARGGDLRNPNLRDVLHRVATELPATLIVEHADELSQNEATEVAHHLRANSNTKLIF
TITRPTDATLLLSEAFDVLEISVAPLRNRREDIPHLAKAIAEELGERRLSRRLITTLTHA
DWPRNIDQLRAVVSNAVERAEGAEVTADDLPQGFHRILTKGRLSRLEDAELSELRTALQE
AKGNRSLAAETLQIGRSTLYRRMDYFRSRGFDL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccccatgccgacctgagcggcatccgcccgatcgtggcccggtcctggtaccgc
agccgtgctgcgggagtggatgcctttgccgaccgcgggttctatgacgaagggcgcgtt
gacgagtacaccatcgcggcggcgggcccgcacctgcaaaaactcgatgaagtggcagcc
gatctgggcggctacgtcaacatcacggcccccaacggggtcctggtcaaagcggacttc
ctgcgtgacgatggtttcccggccggctattccctgctggaggaaagctgcggcagcaac
ggtgaaggactggctttggaggagggccgtggtgtctggttggccccggaggaacacttc
cgggaggacatgcgcggaaactggtgcttcgcctccttggtgcgggatcctttccacaac
cgtgtacgggcagtcataggcctcaccctccccgccaaccgggtacccagcctggagccg
tcctctacgctgctgatgcttgagggtgttgcctcgcggatcgagcgggacatcgaagtg
cggacctcgtccaaggaaagggcgctcctgagtgagtatctgagggtctcacggcgccgg
gggaaccggcctgtgatagcagtcgacggcaagaattccctgcagaatgccgccgccacc
gccaccctggcagacaacgatttctcgattatttccggctacgccaaggcagtcatgtcc
tccggacgtgacatgaactgcgaagtgatgcttcaaggccctggggtgtccaccctggag
atctctcccgtgaccctgtccgcggccaacgtgggagcaatagtcgtggtccgcccgcat
gcacccggcaaggaacaacgggcaggcgccgcgaggggcgccctgacattggaagcaccg
ccgcagcccacagctgaaaggctcctgaagcaccttaacggcacgagtacggaattcaag
cgcacgctcaaccttgcccggaaagcggtggaccaagaccgttcggtggtcctgatcggt
gagctgggcagcggaaaactacgcctggccaacgccatcgcatcattacgcggcggccag
atggtggtcgatgcccgcggcggagacctgaggaaccccaacctgagggacgtcctgcac
cgggtagctaccgaacttccggccacgctgatcgtggagcacgccgatgagctgtcgcag
aacgaagcaacggaggttgcacaccatctgcgggctaactccaacaccaaactgatcttc
accatcacgcgtcccacggatgccacgctcctgctctcggaggccttcgacgtccttgag
atctccgtggcgcccctgcgcaacaggcgcgaagacatcccccacctcgccaaagccatc
gccgaggaactgggggagaggcggctgtcccgcaggctgatcaccaccctcacgcatgct
gactggccccggaacatcgatcaactgcgggccgtcgtctccaatgccgttgaacgggcc
gaaggcgccgaggtcacagctgacgacctgccacagggattccaccgcatcctgacgaag
ggccggctctcccgccttgaggatgcggagctcagcgaactgcgaacggcgctccaggaa
gcaaagggcaaccgcagccttgccgccgaaaccctgcagatcggacgctccaccctctat
cgccgcatggactacttccgcagccgcggtttcgacctctga
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