KEGG   Paenarthrobacter sp. R1: QN084_23200
Entry
QN084_23200       CDS       T10646                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
phrz  Paenarthrobacter sp. R1
Pathway
phrz00010  Glycolysis / Gluconeogenesis
phrz00020  Citrate cycle (TCA cycle)
phrz00260  Glycine, serine and threonine metabolism
phrz00280  Valine, leucine and isoleucine degradation
phrz00310  Lysine degradation
phrz00380  Tryptophan metabolism
phrz00620  Pyruvate metabolism
phrz00630  Glyoxylate and dicarboxylate metabolism
phrz00640  Propanoate metabolism
phrz00670  One carbon pool by folate
phrz00785  Lipoic acid metabolism
phrz01100  Metabolic pathways
phrz01110  Biosynthesis of secondary metabolites
phrz01120  Microbial metabolism in diverse environments
phrz01200  Carbon metabolism
phrz01210  2-Oxocarboxylic acid metabolism
phrz01240  Biosynthesis of cofactors
Module
phrz_M00009  Citrate cycle (TCA cycle, Krebs cycle)
phrz_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
phrz_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
phrz_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:phrz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    QN084_23200 (lpdA)
   00020 Citrate cycle (TCA cycle)
    QN084_23200 (lpdA)
   00620 Pyruvate metabolism
    QN084_23200 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    QN084_23200 (lpdA)
   00640 Propanoate metabolism
    QN084_23200 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    QN084_23200 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    QN084_23200 (lpdA)
   00310 Lysine degradation
    QN084_23200 (lpdA)
   00380 Tryptophan metabolism
    QN084_23200 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    QN084_23200 (lpdA)
   00670 One carbon pool by folate
    QN084_23200 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phrz04147]
    QN084_23200 (lpdA)
Enzymes [BR:phrz01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     QN084_23200 (lpdA)
Exosome [BR:phrz04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   QN084_23200 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 GIDA HI0933_like FAD_oxidored NAD_binding_8 Thi4 FAD_binding_3 3HCDH_N DAO Lys_Orn_oxgnase Lycopene_cycl RecQ-1-like_HTH Amino_oxidase 2-Hacid_dh_C Glu_dehyd_C NAD_binding_2 DUF6174 ThiF
Other DBs
NCBI-ProteinID: WIV33453
LinkDB
Position
unnamed1:complement(106401..107798)
AA seq 465 aa
MPHYDVVILGAGPGGYVAAVRSAQLGLSVAIIEEKYWGGVCLNVGCIPSKALLRNADLAH
VFHHQAELFGISGDVTFDFGTAWDRSRTVAETHVKGIHFLMKKNKVTEYEGRGSFVDAHT
ITVAKADGSTEQLTFDNAIISTGSKVRLLPGVTLSDNVVTYEEQILTRELPRSIVIVGAG
AIGMEFAFVMVNYGVKVTIIEFLDRALPNEDVDVSKEIARQYKKYGVDILTSTKVETVVD
SGDKVTVTYTPKDGAPASIEADKVLMSIGFAANVEGFGLENTGVKLTDRGAIDIDDYMRT
NVPGIYAIGDVTAKLQLAHVAEAQGVVAAETIGKAETQTLGDYRMMPRATFCSPQVASFG
LTEQQARDAGYDVKVAKFPFSANGKANGLGEPIGFVKLIADGEHLELLGGHLIGPDVSEL
LPELTLAQKWDLTALEAARNVHTHPTLSEAVQEAFHGLAGHMINM
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgcctcattacgatgtcgtcattctcggcgcgggccccggcgggtacgtcgcagccgtc
cgcagcgctcagctcggcctctcggtcgccatcatcgaggagaagtactggggcggtgtg
tgcctgaacgtcgggtgcatcccctcgaaggcgctcctgcgcaacgccgacctggcccac
gtcttccaccaccaggccgagctgttcggcatctccggtgacgtgacgttcgacttcggc
accgcgtgggaccgcagccgcacggtggccgagacgcatgtcaagggcatccacttcctc
atgaagaagaacaaggtgaccgagtacgagggtcgcggttcgttcgtggacgcgcacacg
atcaccgtcgcgaaggccgacggctccaccgagcagctcaccttcgacaacgcgatcatc
tcgaccggctccaaggtgcgcctgcttcccggcgtcacgctgagcgacaacgtcgtgacg
tacgaggagcagatcctcacgcgcgagctgccgcgctcgatcgtcatcgtcggtgccggc
gcgatcggcatggagttcgccttcgtcatggtcaactacggcgtcaaggtcacgatcatc
gagttcctcgaccgggcgctcccgaacgaggatgtcgacgtctccaaggagatcgcgcgc
cagtacaagaagtacggcgtcgacatcctcacctccaccaaggtcgagaccgtcgtggac
tcgggcgacaaggtcaccgtcacctacacgcccaaggacggcgcgcccgcgtcgatcgag
gccgacaaggtgctcatgtcgatcggcttcgccgcgaacgtcgagggcttcggcctggag
aacaccggcgtgaagctcaccgaccgcggtgcgatcgacatcgacgactacatgcgcacc
aacgtccccggcatctacgccatcggcgacgtcacggccaagctgcagctcgcccacgtg
gccgaggcgcagggcgtcgtggccgccgagaccatcggcaaggccgagacccagacgctg
ggcgactaccggatgatgccccgcgcgacgttctgctcgccgcaggtcgcctcgttcgga
ctcaccgagcagcaggcgcgcgacgccggctacgacgtcaaggtcgcgaagttcccgttc
agcgcgaacggcaaggcgaacggcctcggcgagcccatcggcttcgtcaagctcatcgcc
gacggcgagcacctcgagctgctcggtggccacctgatcggccccgacgtctccgagctg
ctccccgagctcacgctcgcgcagaagtgggacctcacggccctcgaagcggcccgcaac
gtgcacacgcacccgacgctgtccgaagccgtgcaggaagccttccacggcctcgccggc
cacatgatcaacatgtga

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