Paraburkholderia hospita: C2L64_11475
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Entry
C2L64_11475 CDS
T05305
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
phs
Paraburkholderia hospita
Pathway
phs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2L64_11475 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phs03019
]
C2L64_11475 (pnp)
03016 Transfer RNA biogenesis [BR:
phs03016
]
C2L64_11475 (pnp)
Enzymes [BR:
phs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C2L64_11475 (pnp)
Messenger RNA biogenesis [BR:
phs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C2L64_11475 (pnp)
Transfer RNA biogenesis [BR:
phs03016
]
Prokaryotic type
tRNA degradation factors
C2L64_11475 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
UPF0181
Motif
Other DBs
NCBI-ProteinID:
AUT68870
UniProt:
A0AAJ4WZ39
LinkDB
All DBs
Position
1:complement(2532930..2535068)
Genome browser
AA seq
712 aa
AA seq
DB search
MSLFNKVVKEFKWGQQTVRMETGEIARQAGGAVLVDIEDTVVLATVVGAKTAKPGQDFFP
LTVDYIEKTYSAGKIPGGFFRREGRPSEGETLISRLIDRPLRPLFPEGFYNEVQVVIHVM
SINPEVPADIPALIGASAALAVSGLPFNGPVGAARVAYINNEYVLNPTRSQVKESSLDLV
VAGTERAVLMVESEADQLPEDVMLGAVVFGHEQMQTAIDAIHELVREGGKPEWDWQAAPK
NEALISRVNEIAGNELLSAYQTRDKQARSTKLKAVYAATQAKLEEEAAAAGTVAADKASV
GNVLFDIEAKIVRSQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVV
ATLGTKGDEQIIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVA
CLPSAEEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTEAGVTALQMDIKIQGITKEIMQVALAQAKEGRMHI
LSKMTSAVSGANTELSDYAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDG
VVTIASTSSEGMADAKKRIENITAEVEVGQVYEGTILKLLDFGAIVNLLPGKDGLLHISE
IANERIKDINDYLKEGQQVKVKVIQTDEKGRVRLSAKALLNEAAQTEPTPQQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtttaacaaggtcgtcaaagaattcaagtggggccagcaaacggtccgcatg
gaaacgggtgaaatcgcccgccaggcgggcggtgccgtgctggtcgacatcgaagacacc
gtcgtgctcgcgaccgtcgtcggcgcgaagacggcgaagccgggccaggacttcttcccg
ctgaccgtcgattacatcgaaaagacctactcggcaggcaagatccccggcggcttcttc
cgccgcgaaggccgtccgtcggaaggcgaaacgctgatttcgcgtctgatcgaccgtccg
ctgcgtccgctcttcccggaaggcttctacaacgaagtgcaggtcgtcatccacgtgatg
tcgatcaacccggaagtccccgccgacatccccgcgctgatcggcgcatcggcggcactc
gccgtgtcgggtctgccgttcaacggcccggtaggtgcagcgcgcgttgcgtacatcaac
aacgagtacgtgctgaacccgacccgctcgcaagtcaaggaatcgagcctggacctcgtc
gtcgccggtacggagcgcgcggtgctgatggtcgaatccgaagcggatcaactgccggaa
gacgtgatgctgggcgccgtcgtgttcggtcacgagcagatgcaaacggctatcgacgcg
atccacgaactggtccgtgaaggcggcaagcccgagtgggactggcaagccgcgccgaag
aacgaagcgctgatctcgcgcgtcaacgaaatcgcgggcaacgaactgctgtcggcatat
cagacgcgcgacaagcaggctcgctcgacgaagctgaaggccgtctacgcagccacgcaa
gccaagctcgaagaagaagccgcggcagcgggcacggtggcagccgacaaggcatccgtc
ggcaacgtgctgttcgacatcgaagcgaagatcgtccgttcgcagatcctgaacggcgag
ccgcgtatcgatggccgtgacacgcgcacggttcgtccgatcgaaatccgcacgggcgtc
ctgccgcgcacccacggttcggcactcttcacgcgtggcgaaacgcaggcgctggtcgtt
gcgacgctcggcacgaagggtgacgagcagatcatcgacgcgctcgaaggtgagtaccgc
gagcgcttcatgctccactacaacatgccgccgttcgcgacgggcgaaacgggccgcgtc
ggctcgccgaagcgccgcgaaatcggccacggccgtctggcgaagcgcgcgctggttgcg
tgcctgccgagcgcagaagaattcggctactcgatccgtgtcgtgtcggaaatcacggaa
tcgaacggttcgtcgtcgatggcttcggtgtgcggcggctgcctcgcgctgatggacgcc
ggcgtgccgatgaaggcgcacgtcgccggcatcgcgatgggcctgatcctcgagggcaac
aagttcgccgtgctgaccgacatcctcggcgacgaagatcacctcggcgacatggacttc
aaggtggcgggcacggaagctggcgtgacggcactgcagatggacatcaagatccagggc
atcacgaaggaaatcatgcaggtcgcgctcgcgcaagcgaaggaaggccgcatgcatatc
ctcagcaagatgacctcggctgtctccggtgcgaacacggaactgtccgactacgcgccg
cgcatgatcaccatcaagatcaatccggaaaagatccgcgacgtgatcggcaagggtggt
tcggtgatccgcgcgctgacggaagaaacgggcacgacgatcgacatttcggatgacggc
gtcgtcacgatcgcgagcacgagcagcgaaggcatggccgacgcgaagaagcgcatcgag
aacatcacggcggaagtcgaagtcggccaggtctacgaaggcacgattctcaagctgctg
gacttcggcgcgatcgtcaacctgctgccgggcaaggatggtctgctgcacatctccgaa
atcgccaacgagcgtatcaaggacatcaacgactacctgaaggaaggccagcaagtgaag
gtcaaggtcatccagacggacgagaagggtcgtgtgcgtctgtcggcgaaggcgctcctg
aacgaagcagcacaaacggagccgacgccgcagcagtaa
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