Paraburkholderia hospita: C2L64_11755
Help
Entry
C2L64_11755 CDS
T05305
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
phs
Paraburkholderia hospita
Pathway
phs03030
DNA replication
phs03430
Mismatch repair
phs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2L64_11755
03430 Mismatch repair
C2L64_11755
03440 Homologous recombination
C2L64_11755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phs03032
]
C2L64_11755
03400 DNA repair and recombination proteins [BR:
phs03400
]
C2L64_11755
Enzymes [BR:
phs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2L64_11755
DNA replication proteins [BR:
phs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C2L64_11755
DNA repair and recombination proteins [BR:
phs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C2L64_11755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
AUT68919
UniProt:
A0AAN1MJ24
LinkDB
All DBs
Position
1:complement(2594220..2597789)
Genome browser
AA seq
1189 aa
AA seq
DB search
MSPMSDPRFVHLRVHSEFSIADGIVRIDDVVDSAAKDGQGALALTDLGNAFGLVRFYQEA
RGKGVKPIAGCDVWITNPDDRDKPSRLLLLVKNKTGYLNLCELLSKAWLTNQYRGRAEVE
PAWLEGGLGEGLLALSGAQHGDVGMALAAGNEEAAKRNAQRWATIFPNGFYIELQRGGQP
GVEAYVQQAVALAASLKLPVVATHPLQFMTPDDFTAHEARVCISEGDMLANPRRQKRFTT
DQYFRTQAEMVALFADIPSAVANTIEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVQL
SKEGLEKRLEQLFPEQAERDAQRETYYARLDFECGTIIKMGFPGYFLIVADFINWAKNNG
VPVGPGRGSGAGSLVAYALGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVI
QYVKEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGVAKLIPFKPGKHVTIAD
AMKEEPLLQERFDNEDEVHQLLELAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGD
ESGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKENWSLAQVPLDDPA
SFSILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARKHG
REVVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAK
HREIFAEGAAKNGLTREKADETFDLMEKFAGYGFNKSHAAAYALLAYHTAWLKAHHPAEF
MAANMSLAMDDTDKVKILFEDCLANKMAVLPPDINMSAYRFEPVAEADGKRSRTIRYGLG
AIKGSGQNAIEEILRAREEGLFIDIFDFCNRIDRRIVNRRTVEALIRAGAFDSLHENRAQ
LIASVSLAMEAADQASANAMQAGLFDMGDAPSQGHELIDEPAWPEKRRLQEEKTALGFYL
SGHLFDAYKDEVRRFVRQKIGELKEGRDKLVAGVIVSLRTQMTQRGKMLIALLDDGTGQC
EVTVFNEQFEAHKQLFKEDELLVVQGQARNDAFTGGIRFTVDTPMDLGRARTRYAQAVKV
QMNGNANALVLRSVLEAYRAKPEDAEVAAPAPAARGGGRGGFGGNGDSGGRGQRPSAPMP
NGLAVQIVYRSDNAEGEVRLGDAWRVRPTDELLAALRSEFSGSAIEIVY
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgtcagatccccgcttcgtccatctccgcgttcactccgaattctcgatt
gccgatggcatcgtgcgtatcgacgacgtcgtcgattccgctgccaaagacggtcagggc
gcgctcgcgctcaccgatctcggcaatgcattcggtctcgtccgtttctatcaggaagcc
cgtggcaaaggggtcaaacccattgccggctgcgatgtctggatcacgaatcctgacgac
cgcgacaagccttcgcgacttctgctgctggtcaaaaacaagactggctacctgaatctt
tgcgaactactgtcgaaggcgtggctgacgaaccagtatcgcgggcgcgcggaagtggaa
ccggcgtggctcgaaggcgggctcggcgaagggctgctcgcgctgtcgggtgcgcagcat
ggcgacgtcggcatggcgctcgcggcgggcaacgaagaagccgcgaagcgcaacgcacag
cgctgggcgacgatcttcccgaacggtttctatatcgaactgcagcgcggcggccagccc
ggcgttgaggcgtatgtgcagcaggcggtcgcgctcgcggcgtcgctgaaactgcccgtt
gtcgccacgcatccgctgcagttcatgacgccggacgacttcaccgcgcacgaagcgcgc
gtgtgtatttcggaaggcgatatgctcgcgaatccgcgtcgccagaaacgcttcacgacg
gatcagtatttccgcacgcaggccgagatggtcgcgctgttcgcggacattccgtcggcc
gtcgcgaacacgatcgaaatcgcgaagcgctgcaatctgacgctcgaactcggtaagccc
aagctgccgctgttcccgacgccggacggcatgtcgctcgacgactacctggtgcagttg
tcgaaagaagggctggaaaagcgtctcgagcaactgttcccggagcaggccgaacgcgac
gcgcagcgcgaaacgtactacgcgcggctggacttcgaatgcggcacgatcatcaagatg
ggctttcccggctacttcctgatcgtcgcggacttcatcaactgggcgaagaacaacggc
gtgcccgtcgggccaggccggggttcgggcgcgggctcgctggtcgcgtacgcgcttggc
attaccgacctcgatccgctgcgctacaacctgctgttcgaacgttttctgaatccggag
cgggtgtcgatgcccgacttcgacatcgacttctgccagcacggccgcgatcgcgtgatc
cagtacgtgaaggagaagtacggcgcggacgccgtgtcgcagatcgcgacgttcggcacg
atggccgcgaaggcggccgtgcgcgatatcgggcgtgtgctcgatctcggttatatgttc
acggacggcgtcgccaagctgattccgttcaagcccggcaagcacgtcacgatcgccgac
gcgatgaaggaagagccgctgctgcaggagcgcttcgacaacgaagacgaagtgcatcag
ttgctcgaactcgcgcagcgcgtagaaggcttgacgcgtaacgtcggcatgcacgcgggc
ggggtgctgatcgcgcccggcaagctgacggatttctgtccgctctatacgcagggcgac
gaaagcggcgtcgtgagccagtacgacaaggatgacgtcgaagccgtcggcctcgtgaag
ttcgacttcttgggtctgaccacgctgaccattctcgactgggccgagcgctatattcgc
cgtctcgatccgtcgaaggaaaactggtcgctcgcgcaagtgccgctcgacgaccccgcg
tcgttctcgatcctcaagaaagcgaacacggtcgccgtgttccagctggaaagccgcggc
atgcaaggcatgctgaaggacgcgcagcccgaccgcttcgaggacatcatcgcgctggtg
gcgttgtatcgtccgggcccgatggacctgattccgagcttctgcgcgcgtaagcacggc
cgcgaagtggtggagtatccggacccgcgcgtcgagcctgttctgaaagagacctacggc
atcatggtctaccaggagcaggtgatgcagatggcgcagatcatcggcggctattcgctc
ggcggcgccgacctgctgcgtcgcgcgatgggcaagaagaagcccgaggagatggcgaag
caccgcgagatcttcgccgaaggtgcggcgaagaacggcctgacacgcgagaaggccgac
gagaccttcgacctgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggcc
gcctatgcgctgctcgcgtaccacaccgcgtggctcaaggcgcaccatcccgccgaattc
atggcggccaatatgtcgctcgcgatggacgacacggacaaggtcaagatcctgttcgaa
gactgcctcgcgaacaagatggccgtgctgccgcccgacatcaatatgtccgcgtaccgc
ttcgagccggtcgcggaagccgacggcaagcgctcgcgcacgatccgctacggtctcggc
gcgatcaagggcagcggccagaacgcgatcgaagaaatcctgcgcgcgcgcgaagaaggt
ttgttcatcgatatcttcgatttctgcaaccggatcgatcgccgcatcgtcaatcgccgc
acggtcgaagcgctgattcgcgcaggcgcgttcgattcgctgcacgagaaccgcgcgcaa
ctgatcgcgtcggtgtcgctagcaatggaagccgcggatcaggcgagcgccaatgcgatg
caagcgggcctgttcgacatgggtgatgcgccgtcgcaaggccatgaactgatcgacgaa
cccgcgtggccggaaaagcgccgtttgcaggaagagaagacggcgctcggcttctacctg
tcgggccatctgttcgacgcctacaaggacgaagtgcgccgcttcgtgcgtcagaagatc
ggcgaactgaaggaagggcgcgacaagctggtggcgggcgtgatcgtgtcgctgcgtacg
cagatgacccagcgcggcaagatgctgatcgcgctgctcgacgatggcacgggccagtgc
gaggtgaccgtcttcaacgagcaattcgaggcgcacaagcagctgttcaaggaagacgaa
ctgctcgtcgtgcaaggtcaggcgcgtaacgacgcgttcacgggcggcatccgtttcacg
gtcgatacgccgatggacctcggccgcgcgcgcacgcgttacgcgcaggcggtgaaggtg
cagatgaacggcaatgcgaatgcgctggtgttgcgctccgtgctcgaagcctatcgcgcg
aagccggaagacgcggaagtggctgcgccggcgcccgctgcccgaggcggcggtcgtggc
ggcttcggtggaaatggcgattctggcgggcgcgggcagcggccatccgcgccgatgccg
aatggcctcgccgtacagatcgtctatcgcagcgacaacgcggaaggtgaggtacggctt
ggcgatgcatggcgcgtgaggccgacggacgaactgctcgccgcgttgcgcagcgagttt
tcaggcagcgcgatcgagatcgtgtattga
DBGET
integrated database retrieval system
