Paraburkholderia hospita: C2L64_15645
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Entry
C2L64_15645 CDS
T05305
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
phs
Paraburkholderia hospita
Brite
KEGG Orthology (KO) [BR:
phs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phs03016
]
C2L64_15645
Enzymes [BR:
phs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
C2L64_15645
Transfer RNA biogenesis [BR:
phs03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C2L64_15645
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
WHD_RNase_II
Motif
Other DBs
NCBI-ProteinID:
AUT69562
UniProt:
A0AAJ4SZ09
LinkDB
All DBs
Position
1:complement(3459234..3461315)
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AA seq
693 aa
AA seq
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MNVFFEESGSFKAGNVMSRQGDAFQVELPGGRRAKVRAKDVLMEFEKPSAGELMEQADAA
AQDIDLDFLWECAPEDEFPFATLGAEYFGESFGPVERAALILRMHGSPIYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQQGYEEELKAGRLPDGFQSKALGLLTKPDKNAIEYKA
LEAAAAARGISMARLMLECGGIPSARALHEARFLSEFFPHGTGFPPVTIGALPEDLPQAE
IEAFSIDDVTTTEIDDAFSVEHLSDGRVRIGIHIAAPALGIERGDAVDAVARGRLSTVYM
PGDKITMLPDSVVEKFTLAEGGLRPALSLYSIVNRETQEIVVSETRAELVYVKNNLRHNT
LDELVTEEALANGTGDYPHKEDIAVLWPFAQALFEKRQLARAGFGLRREVQRNTDFNFYV
EGEHVSITPRRRGSPLDTIVAELAILANSTWGAFLHDHGVPGIYRSQRAFGAPTGPKRTR
MQTTAAPHEGLGVSQYAWSTSPLRRYVDLVNQWQLIACVQHGVTAKLAAPFKPKDADLFA
VVQGFDDTYTAYADHQRRMEYFWCLRWLTQEGKKQVVASVVKGDLVRLEDVPLLLHVPGL
GVHARGTRLMLEVMSVDELTVEASVRPLHVLDAPTVTSGTEEEEETEEEIIDAADESAES
EAEAQAEADTAAAEGEQPADSNDPTQHATEQGQ
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggtagtttcaaggccggcaacgtgatgtcgcgtcaa
ggcgacgcgtttcaggtcgagctgccgggcggacgccgcgcgaaagttcgcgcgaaagac
gtgctgatggagttcgagaagccgtcggcgggcgaactgatggaacaggccgatgccgcc
gcacaggacatcgatctggactttctgtgggaatgcgcgcctgaagacgaattcccgttt
gccacgctcggcgccgaatactttggcgagtcgttcgggcccgtcgagcgcgccgcgctg
attttgcgcatgcacggttcgcccatctatttccgccgcaaggggcgcggccagtatcag
cgcgcgccggaagagcaactgaagatggcgctcgcgtcgctggagcgcaagcgtcagcag
gcgctcgtgcagcagggctacgaagaggaactgaaggcgggccgtctgccggacggcttc
cagagcaaggcgctcggcctcttgacgaagcccgacaagaacgcgatcgaatacaaggcg
ctcgaagcggcagcggcggcgcgtggtatttcgatggcgcgtctgatgctcgaatgcggc
ggcattccgtcggcgcgcgcgctgcacgaggcgcgcttcctgtcggaattcttcccgcac
ggcacgggctttccgcctgtgacgatcggcgcgctgccggaagatctgccgcaggctgaa
atcgaagcgttctcgatcgacgacgtgaccacgacggaaatcgacgatgcgttttccgtg
gagcatctgtccgacggacgcgtgcggatcggcattcacatcgcggcgccggcgctgggc
atcgaacgcggcgatgccgtcgatgcggtcgcgcgcggccgtctgtcgaccgtttacatg
ccgggcgacaagatcacgatgctgcccgattccgtcgtggaaaaattcacgctggccgaa
ggcggtttgcgcccggcgctgtcgctgtacagcatcgtgaaccgcgagacgcaggaaatc
gtcgtcagcgaaacgcgtgccgaactggtctacgtgaagaacaatctgcgccacaacacg
ctcgacgaactcgtcacggaagaggcgctcgccaatggcacgggcgactatccgcacaag
gaagacatcgcggtgctgtggccgtttgcgcaggcgctgttcgagaagcgccagctcgcg
cgcgccggtttcggcctcaggcgcgaagtgcagcgcaatacggacttcaatttctacgtc
gaaggcgagcatgtgagcatcacgccgcgccgccgcggttcgccgctcgatacaatcgtc
gctgaactggcgattctcgcgaactcgacgtggggcgcgttcctgcacgatcacggcgtg
cccggcatctatcgctcgcagcgcgcgttcggcgcgccgacaggaccgaagcgcacccgg
atgcagacgacggccgcgccgcacgaaggtctcggcgtgtcgcagtacgcatggagcacg
tcgccgctgcgccgctacgtcgacctcgtcaaccagtggcaactgatcgcgtgcgtgcag
cacggcgtgacggcgaagctcgcggcgccgttcaagccgaaggacgccgacctgttcgcc
gtcgtgcaaggtttcgacgacacgtacaccgcgtacgccgatcatcagcgccgcatggag
tatttctggtgtctgcgctggctcacgcaggaaggcaagaagcaggtggtcgcttccgtc
gtgaagggcgatctcgtgcggctcgaagacgtgccgctgctgctgcacgtgccgggtctc
ggcgtgcatgcgcgcggcacgcggctgatgctcgaagtgatgtcggtggatgaactgacg
gtcgaggcatcggtgcggccgttgcacgtgctcgacgcgccgaccgtgacgagcggcacg
gaagaagaggaagagaccgaagaagaaatcatcgacgccgccgacgaatccgccgaaagc
gaagccgaagcgcaagccgaagccgatacggccgcagcggagggcgagcagcccgccgac
tcgaacgatccaacgcaacacgcgacggagcagggccaatga
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