Paraburkholderia hospita: C2L64_33240
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Entry
C2L64_33240 CDS
T05305
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
phs
Paraburkholderia hospita
Brite
KEGG Orthology (KO) [BR:
phs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phs03000
]
C2L64_33240
Transcription factors [BR:
phs03000
]
Prokaryotic type
Helix-turn-helix
Other families
C2L64_33240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_lid_14
HTH_30
PAS_4
AAA_5
HTH_23
HTH_29
HTH_28
P22_Cro
HTH_Tnp_ISL3
AAA
HTH_7
HTH_1
AAA_16
HTH_22
NUMOD1
AAA_2
HTH_50
AAA_22
AAA_7
HTH_17
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
AUT73264
UniProt:
A0AAN1JHH9
LinkDB
All DBs
Position
3:complement(17380..19377)
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AA seq
665 aa
AA seq
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MRDDAKTTGSLTGRESGWLTPSIQKAHERSETFGLSAAMRPDYDVLTHGELRMKLEQNLV
LCAHATPVMETLREQIANTQSMIVLTDAQGLILHSIGDDDFLQRAEKVALMAGANWAEER
QGTNAIGTAIAERTATVVHGDQHYLAANRFLTCSSVPILDPYGDLVGVLDVTGDHRGYHQ
HTMALAKMSVQMIENHLFANTFRNTLQIAFHGRPEFLGTLMEGIMAFTCDGRFLSANRSA
QFQVGLPLAAMRAHTLSSLFGLTTPQLIDRLRASQGHHITLDLSNGTVVCANVEFRRPTL
GSETSWPADAAANARPAAARAPLTKAASPANAPSRLDSLDTGDPQICAVVAKVRKVLGKD
IPILITGETGTGKELLAQAIHNDSPRRAGPFVAVNCASIPENLIESELFGYEDGAFTGAR
RKGAIGKLLQANGGTLFLDEIGDMPYPLQVRLLRVLQERVVDPLGSSKSIPVDIAIICAT
HRNLREMIVQNRFREDLYYRLNGLVVRLPPLRERTDLAIVIERMLQSVPSDEIAGAPLSV
ADDVKTLFEQCAWPGNFRQLGNLLRTAAAMVDDDGQIRREHLPDDFFDDLRSSSALAARA
ADYPLPLHDARMQDVQASAIAAAVARHNGNVSAAARALGISRNTVYRKMPSLCAADPRNS
GASEN
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacgatgcgaagacaaccggatcactgacaggccgggagagcggctggctcacc
ccgtcgatccagaaagcgcacgagaggtcggaaacgttcgggctaagcgcggcgatgcgt
cccgactacgatgtgctgacgcacggcgaattgcgcatgaagctcgaacagaatctcgtg
ctgtgcgcgcacgccacgcccgtcatggaaacgctgcgcgagcagatcgcgaacacgcaa
agcatgatcgtgctcaccgatgcgcaagggctgattctccattcgatcggcgacgacgat
tttctgcagcgcgccgagaaagtcgcgctcatggctggcgccaactgggccgaggaacgg
caaggcacgaatgcgatcggcacggccatcgccgagcgcacggcgaccgtcgtgcacggc
gatcagcactatctcgccgctaaccgcttcctgacctgttccagcgtgccgatcctcgat
ccgtacggcgatctggtcggcgtgctcgacgtgacgggcgaccatcgcggctaccatcag
cacacgatggcgctcgcgaagatgtccgtgcagatgatcgaaaaccatctgttcgcgaac
accttccgcaacacgctgcaaatcgcgtttcatggccggcccgaatttctgggcacgttg
atggaaggcatcatggccttcacgtgtgacgggcgctttctgtccgcgaatcgcagcgcg
cagttccaggtcgggctgccgctcgcggcgatgcgcgcgcatacgctgtcgtcgctgttc
gggctgaccacgccgcagctgatcgaccgcctgcgcgcgagccagggccatcacattacg
ctcgatctgagtaacggcacggtcgtgtgcgcgaacgtcgagtttcgccgcccgacgctc
ggcagcgagacttcatggcccgccgacgctgccgccaacgcgcggcccgccgctgcgcgc
gcgccgctaacaaaagccgcctcgcccgccaacgcgccgtcgcggctcgactcgctcgac
acgggcgacccgcagatttgcgccgtcgtcgcgaaggtgcgcaaggtgctcggcaaggac
atccccatcctgatcacgggcgagacgggcaccggcaaggaactgctcgcgcaggccatc
cataacgattcaccgcgccgcgcgggcccgttcgtcgcggtcaactgcgcatcgataccc
gaaaacctgatcgagtcggagcttttcggctacgaagacggcgcatttacgggcgcgcgg
cgcaaaggcgcgatcggcaaactgctgcaggccaacggcggcacgctgtttctcgacgag
atcggcgacatgccgtatccgttacaggtgaggctgctgcgcgtgttgcaggaacgcgtc
gtcgatcccctcggctccagcaagtcgattcccgtcgacatcgcgatcatctgcgcgacg
caccgcaatctgcgcgaaatgatcgtgcagaaccggttccgcgaggacctgtattaccgt
ttgaacggtctcgtcgtcagactgccgccattgcgcgaacgcaccgatctcgcaatcgtc
atcgagcggatgctgcaatcggtaccgtccgacgaaatcgcaggcgcgccgctcagcgtc
gcggacgacgtgaagacgctgttcgagcaatgcgcgtggccgggcaatttccggcaactc
ggcaatctgctgcgcacggcagccgcgatggtcgacgacgatgggcaaatccgccgtgag
catctgcccgacgatttcttcgacgatctgcgcagcagttcagcactggcggcgcgcgcg
gcagactacccattgccgctgcacgacgcgcggatgcaggacgtgcaggcctccgcgatt
gcggcggctgtcgcgcggcataacggcaacgtgtcggcggcggcgcgcgctctcggcatt
tcgcgcaacaccgtctatcgcaagatgccctctctgtgcgccgccgatccgcgaaacagc
ggagcgagcgagaactag
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