Paraburkholderia hospita: C2L64_34005
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Entry
C2L64_34005 CDS
T05305
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
phs
Paraburkholderia hospita
Pathway
phs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C2L64_34005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phs03400
]
C2L64_34005
Enzymes [BR:
phs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
C2L64_34005
DNA repair and recombination proteins [BR:
phs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C2L64_34005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF4427
Motif
Other DBs
NCBI-ProteinID:
AUT73393
UniProt:
A0AAN1JG48
LinkDB
All DBs
Position
3:complement(184447..184986)
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AA seq
179 aa
AA seq
DB search
MAHPDSLQGLPDLLDTGLSVVFCGINPGLSAASTGHHFEGRGNRFWRVLHLAGFTREQLR
PEDDRSLLQYACGLTTAVSRPTARAEQLSRSEIKVAAPEFERKVTLYAPRYVAFLGKMAV
SELIGKRDVDWGLQSVTFGGARVWVLPNPSGLNRAFSLDALVSAYRELRLAVDSVHCAL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccctgactcgcttcaaggtcttccggatcttctcgatacaggcttatcggtg
gtattttgcgggatcaatccggggctaagcgcggcatcgacaggtcaccacttcgagggc
cgtggaaaccggttctggcgagttcttcacctggcgggttttacgcgcgaacagctacgc
cccgaagacgaccgttcactgctgcaatacgcgtgcggcttgacgacggcagtatcgcgc
ccgacggcgcgggcggagcagttgtcccgatctgaaatcaaggtggccgcgcctgaattc
gagcgaaaggtcacactgtacgcgccgcgctatgttgccttccttggcaagatggcggtt
tccgaattgatcggcaaacgcgacgtcgattgggggcttcagtcggtcacatttggcggc
gcacgcgtctgggtattgcccaatcccagcggcttgaaccgcgcgttcagtctggatgcg
ctggtttccgcgtatcgggaacttcgtctcgcagttgattcagtgcattgcgcactttga
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