Paraburkholderia hospita: C2L64_38265
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Entry
C2L64_38265 CDS
T05305
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
phs
Paraburkholderia hospita
Brite
KEGG Orthology (KO) [BR:
phs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phs03000
]
C2L64_38265
Transcription factors [BR:
phs03000
]
Prokaryotic type
Helix-turn-helix
Other families
C2L64_38265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
Mg_chelatase
AAA_5
HTH_23
HTH_30
PAS_4
HTH_7
AAA_2
HTH_29
HVO_A0261_N
PAS
HTH_50
HTH_22
HTH_Tnp_ISL3
AAA_3
Mga
HTH_11
HTH_AraC
HTH_Tnp_1_2
HTH_26
Xre-like-HTH
HTH_20
HTH_17
MCM
AAA_7
TrmB
Motif
Other DBs
NCBI-ProteinID:
AUT74133
UniProt:
A0AAN1JIW5
LinkDB
All DBs
Position
3:complement(1113447..1115558)
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AA seq
703 aa
AA seq
DB search
MSSLVDIDSHVRDVLNIVNNQPASCSMSHSVAQSWTRCLVEFGLDPGRFVLPPVLTQHEL
NLRREAAGDLIACSKLEMTTLYQQLADPELAVILVDANGVIVHQVSSVPFGEAVAADGLR
PGAVWSEREAGTNGMGTCLTERECLAIYQHEHFYPRYMSLTCSAAPIFDERGAIVGVLDV
TSRSRMLQQHSLVLVGMSRQMIENRLIDSRYRRANTVHFHSRPEFVGTLHAGKLAVDDDG
IVLAANRSALFQLDLRSPDQLCGKRIEEAFSATLEDMIARSIRGSFHPITVYSAHASNRF
FVIAQTPRDATSFGNANQVATSARGQWSDVSINRVSRAKSPRETRDAKPAAAGLDKLAHL
EFGDPRMAAQSQLAARVIQRKIPIILRGQTGTGKEVFANALHSISPNAAGAFVAVNCASL
PETLIESELFGYRAGAFTGAQREGRRGKIVQANNGTLFLDEIGDMPMALQARLLRVIEER
EVTPLGAETTIKVDFQLISASHRNLLDLVQRGLFREDLYYRLNGIEINLPPLCERADLLP
LVQHILESEAEDPPELSAEARQALANYAWPGNIRQLRHVLQMAIALCDGPEIRCVHLPAE
IVDETRSAGGAPARASAAGPLAQQANGAATPFDDEADLSALNAIQVKERETVLAMLDEHR
WNVSNVAKTLGISRNTLYRKMHRLHIRLSHDAAQASVDDACGK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgctcgttgacatcgattcgcatgtccgggatgtactgaacatcgtcaacaac
cagcccgcatcgtgttcgatgagccattccgtcgcgcaatcgtggacgcgctgtcttgtc
gagttcggtctggaccctggacgtttcgtgctgccgcccgtgctgacgcagcacgaactg
aacttgcggcgcgaggcggcgggcgatctgatcgcctgctcgaagctggaaatgaccacg
ctctaccagcaactcgccgaccccgaactcgcggtgatactcgtcgatgcaaacggtgtg
atcgttcatcaggtttcgtcggtgccgttcggcgaggccgtcgccgccgacggtctgcga
cccggcgccgtgtggagcgagcgcgaagcgggcacgaacggcatgggcacctgcctgacg
gagcgcgaatgtctcgcgatctatcagcatgagcatttctatccgcgctatatgtccctc
acctgctcggccgcgccgatcttcgacgaacgcggcgcgattgtcggcgtgctcgacgtg
acgagccgctcgcggatgctgcagcagcattcgctcgtgctcgtcggcatgtcgcggcag
atgatcgagaaccggctgatcgactcgcgctaccggcgcgccaataccgtccacttccat
agccgccccgaattcgtcggcacgctgcacgcaggcaagctcgctgtcgacgacgacggc
atcgtgctcgccgccaatcgcagcgcgttgttccagctcgacctgcgctcgcccgaccag
ttatgcggcaagcgcatcgaagaagcgttcagcgcgacgctcgaagacatgatcgcgcgc
agcattcgcggctcgttccacccgatcaccgtgtacagcgcgcacgccagcaaccgcttc
ttcgtgatcgcgcagacgccgcgcgacgcgacgtcgttcggcaacgcgaaccaggtggca
acgagcgcgcgcggacagtggagcgacgtatcgatcaaccgcgtttcgcgcgccaaaagc
ccgcgcgaaacgcgcgacgcgaagccggcagcggccgggctcgacaagctcgcgcatctg
gaattcggcgatccgcgcatggccgcgcagagccagctggccgcgcgcgtgatccagcgg
aaaatccccatcatcctcagaggccagacgggcacgggcaaggaagtgttcgccaacgcg
ctgcatagcatcagtcccaacgcggcgggcgcgttcgtcgcggtgaactgcgcgtcgctg
ccggagacgctgatcgaaagcgagctgttcggctatcgcgcgggcgcgttcacgggcgcg
cagcgcgaaggacggcgcggcaagatcgtgcaggcgaacaacggcacgctgttcctcgat
gaaatcggtgacatgccgatggccttgcaggcgcggctgctgcgcgtgatcgaagaacgc
gaagtcacgccgcttggcgccgaaaccacgatcaaggtcgatttccagctgatcagcgcg
agccaccgcaacctgctcgatctcgtgcagcgcggcctgttccgcgaagacctgtactac
cggctcaacggcatcgagatcaacctgccgccgctatgcgaacgcgccgatctgctgccg
ctcgtgcagcacatcctcgaaagcgaagccgaagatccgcccgaactcagcgccgaagcg
cggcaggcactcgcgaactacgcgtggcccggcaacatccgccagttgcggcacgtgctg
cagatggccatcgcgctgtgtgacggaccggaaatacgctgcgtgcatttgccggcggaa
atcgtcgatgagacgcgtagcgcgggcggcgcgcccgcacgcgcttcggcggcgggaccg
ctggcgcagcaggcaaacggagcggcaacaccgttcgacgacgaggctgatttatcggcg
ctcaacgccatccaggtcaaggagcgcgaaacggtgctcgcgatgctcgacgagcatcgc
tggaacgttagcaacgtcgcgaagacgctcggtatcagccgcaacaccttgtaccggaag
atgcacagactgcacatccggctgtcgcacgacgccgcacaggcttccgtcgacgacgcg
tgcggcaagtga
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