KEGG   Paraburkholderia hospita: C2L64_39050
Entry
C2L64_39050       CDS       T05305                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
phs  Paraburkholderia hospita
Pathway
phs03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:phs00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C2L64_39050 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phs02044]
    C2L64_39050 (icmF)
Secretion system [BR:phs02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C2L64_39050 (icmF)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: AUT74273
UniProt: A0A1H6J9M4
LinkDB
Position
3:1296077..1299604
AA seq 1175 aa
MKLLGWFMRPIVLSFLGVLALALIVWIEGPLLAFAGKAPLESAASRWIVIAVLFALWVLY
WGVRWLLVRLANVKFTRVVAEEAPQPGRKESEADVAALKQRFDEAMTILRKARVKGRFGS
QYVYQLPWYMFVGAPGTGKTTALLHSGLKFPLAERLGKQAVGGVGGTRNCDWWFTDDAVL
LDTAGRFTTQDSFAEADQAAWGGFLQLLRKYRPRRPLNGVIVALSVQDLLQLSDTQRAVQ
AGAVRERLKELYTRLGMRFPVYVVVTKCDLLAGFAEFFDDLGRDEREQVWGVTFPYVAQG
GPDEALASFPGEFAALEKQLQARVLHRMQQETDTRRRALVYGFPQQFAGLENMLTGFLQE
TFSTSRFDEAALLRGVYFTSGTQEGRPIDRVMSAVASALGLQRQVVLPDPASGRAYFITR
LMRDVIFQEAGLAGTNPKLERRRTWLQRIALGLIGIAVVLALVLFFVSYQRNRAYIANVE
QHVTELQKLAQNTRAGDDPLALLPLLNAARDLPGGYADRNKSVPWLSRLGLYQGDKLGLE
AQASYRRLLKQTLLPLVVHRMEDELRRGDANNPDFQYEVLRAYLMLGDSAHFDADSVRLW
ADIDWRRGPLTNASDDQRNDIDGHLAALFQPAQFDASLPLDKDLIAQARTTLAKMPLAQR
MFNRVARDLEQAKLPPFSVAAAAGRNAALVLVRKSGAPLTRGVSGAYTRAGYQKFGQLRD
EAVVDVAKDNWVLGREESVLTPNGIDDLKSAMTQLYYDEYIKQWDALLADVAVVPFDGVE
KGARVANVLAAPDSPLKAFMLAASQETTLGTVKTGGSLVEQGVGALGNKLDAVKKRLENA
LGNQPDDAAPPPAQVNPVDAHFQALHELAGKPGAAGPVPLDTQLAALKDAASYLEASDAA
RKQGLPAPPGDALNKLKLVAQGAPAPLAGIANDIASGGSMLMVGGERARLNALWQANVAQ
LCRQALDGRYPLVRGSNRDAAPDDFSRILGPGGLIDDFFQKNLATLVDMSGPQWRWRTGA
DSLGIPADVLTQFQRAAQIRDAFFRAGGRDVSVRFTLKVLDIDPAIDHATIDIDGQQLVA
AHVDQSMVFQWPSGKGTGQAHVDFDPSGDSARADGPWALLHLMDNARLQPTAQADRFKMT
FETDGHPLVLQLDASSVTNPFRRGVFEQFRCPDRL
NT seq 3528 nt   +upstreamnt  +downstreamnt
atgaaactgcttggctggttcatgcggccgatcgtgctgtcgtttctcggcgtgctggcg
cttgcgctaatcgtctggatcgaagggccgttgctggcgtttgcgggcaaggcgccgctc
gaatcggccgcgagccgctggatcgtgatcgcggtgctgttcgcgctatgggtgctctac
tggggcgtgcgctggctgctcgtgcggctcgcaaacgtgaagttcacgcgcgtggtcgcc
gaggaggcgccgcagcccggcaggaaggaatcggaagcggatgtcgccgcgctgaagcag
cgcttcgacgaggcgatgacgatcctgcgcaaggcgcgcgtcaaggggcgcttcggtagc
cagtacgtctaccagttgccgtggtacatgttcgtcggcgcgcccggaaccggcaagacg
acggcactgctgcactcgggcctcaagtttccactcgccgagcggcttggcaagcaggca
gtgggcggtgttggcggcacgcgcaattgcgactggtggttcaccgacgatgccgtgctg
ctcgacactgccggccgctttaccactcaggacagcttcgccgaagctgaccaggccgca
tggggcggctttctgcaactgttgcgcaaataccggccgcggcggccgctgaacggtgtg
atcgtcgcgctgtcggtgcaggatctgctgcagctatccgacacgcagcgcgcggtgcag
gcaggtgcggtgcgcgaacggctcaaggagttgtacacccgccttgggatgcgctttccc
gtctacgttgtcgtgacgaagtgcgacctgctggcggggttcgcggaattcttcgacgac
ctcggccgcgacgagcgtgaacaggtgtggggcgtgacgttcccttacgtcgcgcagggc
ggcccggacgaagcgctggcgtcattccccggcgagttcgccgcgctcgagaagcagctg
caggcccgtgtgttgcaccgtatgcagcaggagaccgacacgcgccggcgtgcgctcgtg
tacggttttccgcagcagttcgccggcctcgaaaacatgctgacgggcttcctgcaggaa
acgttcagcacgtcgcgcttcgatgaggcggcgctgctgcgcggcgtctacttcacgagc
ggcacccaggaaggccggccgatcgaccgcgtgatgagcgcggtcgcgtcggcgctcggt
ttgcagcgtcaggtcgtgttgccggacccggcaagcggacgggcgtacttcatcacgcgg
ttgatgcgtgacgtgattttccaggaagccgggctggcaggcaccaacccgaaactggag
cgtcgccgcacgtggctgcagcgcatcgcgctcggtttgattggcattgcggtggtgctc
gcgctggtgctgttcttcgtcagctatcagcgcaaccgcgcttatatcgccaatgtcgag
cagcatgtgaccgaactgcagaagctcgcgcagaacacccgcgcgggcgacgatccgctc
gcgctgctgccgttgctcaacgcggcgcgagatctgcctggcggctacgcggatcgcaac
aagagcgtgccgtggctgtcgcggctcgggctgtaccagggcgacaaactaggccttgaa
gcgcaggcgagctaccggcgtctgctcaagcagaccttgctgccgctcgtcgtgcacagg
atggaagacgaactgcggcgcggcgacgcgaacaatcccgactttcagtacgaggtgctg
cgcgcgtatctgatgctcggcgattcagcccacttcgacgccgattccgtgcggttatgg
gccgacatcgactggcggcgcgggccgttgaccaatgcgagcgacgatcagcgtaatgac
atcgacggtcatctcgcggcgctgttccagcccgcgcagttcgacgcgtcgctgccgctc
gacaaggacctgatcgcgcaggcgcgcacgacgctcgccaagatgccgctcgcgcaacgc
atgttcaatcgcgtcgcgcgcgatctcgaacaggcgaagctgccgccattcagcgtcgcg
gccgcggccggtcgcaacgcggcgctggtgcttgtcagaaagagtggtgcgccgctgacg
cgcggcgtctccggcgcctatacgcgggcggggtatcagaagtttggccagttgcgcgac
gaggccgtagtcgatgtcgccaaggacaactgggtgctcggtcgcgaggaatccgtactc
acgccaaacggcatcgacgatctgaagtcggcgatgacgcagctgtactacgacgagtac
atcaagcaatgggacgcgctgctggcggatgtcgcagtggtgccgttcgatggcgtggag
aagggtgcgcgcgtggcgaacgtgctcgccgcgcccgattcgccgttgaaggcgttcatg
ctcgctgcctcccaggagaccacgctcggcacggtgaagacgggtggctcgctggtcgaa
caaggcgttggcgcgttgggcaacaagctcgatgcggtgaagaagcggctcgaaaacgcg
cttggcaaccagccggacgatgcggcgccgccgcccgcccaggtcaatcccgtcgatgcg
cactttcaggcgctgcacgaactggcgggcaagccaggtgcggcgggtcccgtgccgctc
gatacgcaactcgcggcgctgaaggacgcggcgtcgtatctcgaagcgtccgacgcggcg
cgcaagcaaggactgcccgcgccgccgggcgacgcgctgaacaagttgaaactcgtcgct
cagggcgcccccgctccgcttgcgggcatcgccaacgacatcgcgagcggtggctcgatg
ctgatggtcggcggtgaacgagcgcgtttgaatgcgttatggcaggccaatgtcgcgcag
ctttgcaggcaggcgctcgatggccgctacccgctggtacgcggctccaaccgggatgca
gcccccgacgacttcagtcggatactcgggccaggcgggctgatcgacgactttttccag
aagaacctggccaccctggtcgacatgtcggggccgcaatggcgctggcgcacgggcgcc
gattcgctcggcattccggcggacgtgctcacgcagttccagcgggctgcgcagatcagg
gacgcatttttccgcgcaggagggcgtgatgtgtcggttcgcttcacgctaaaggtgctc
gatatcgatccggccatcgaccacgccaccatcgatatcgacgggcagcaactggttgcc
gcccatgtggatcaatcgatggtgttccagtggccgagcggcaaaggcaccggacaggcg
catgtcgatttcgacccatcgggggattccgcgcgggcggatgggccgtgggcgctgttg
catctgatggacaacgcgcgcttgcagccgaccgcgcaagcggaccgcttcaagatgacc
ttcgaaacggacggacacccgctcgtgcttcagcttgacgcgagcagcgtgacgaatccg
ttccgtcgtggggtgttcgaacagttccgttgtcctgaccggttatga

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