Paraburkholderia hospita: C2L64_46285
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Entry
C2L64_46285 CDS
T05305
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
phs
Paraburkholderia hospita
Pathway
phs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C2L64_46285 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phs03400
]
C2L64_46285 (recC)
Enzymes [BR:
phs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C2L64_46285 (recC)
DNA repair and recombination proteins [BR:
phs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2L64_46285 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AUT75740
UniProt:
A0AAN1JKK9
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All DBs
Position
4:421884..425522
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AA seq
1212 aa
AA seq
DB search
MESFLTSNSLSPGLMLIHGNRSERLRDLLVEWMKRNPLAPLENEVILVQSNGIAQWLKLA
LAADHDPMTDSGGCGIAAALEISLPSTFIWQAYRAVLGKSSVAEVSPFDESRLVWRLMRV
LPTLIDLPAFEPLRRFISHDDDRRKRFQLAERIADLFDQYQMYRADWLDRWAKGNDSVLD
ARGEVHPLPDEQRWQAALWRELVADVANSADAAAAPEAMSDGGRAAVHQAFLARVEAWDS
DTRPPGLPRRVIVFGISSLPRQSLEALAAIARWTQVLMCVPNPCAHYWADIVPDKELLRA
QHSRQQRRVGAPAELAAEQLHLHAHPLLASWGKQGRDFIGLLDEFDSAEARERYRPQFAG
IGQRIDLFEEREATSLLQQLQDDIRDLRPLRETQEEWPPVDPAADESIRFHIAHSAQREV
EVLHDQLLAAFNADPTLRPRDIIVMVPDIDAYAPHIQAVFGLLDRDDRRYIPFSVADRGQ
RKADPLVGALETLLSLQHSRLTVSDLLDLLDVPALRRRFAIDESDLPTLRAWMRGANVRW
GLHAEHRASLGLPRDDNAAAPHTWLFGLRRMLLGYAVGGETDAWGDIEPFGEVGGLDAAL
LGPIVRLIDELDHAWRTMCEPATPTVWCERLRSLKQAFFSADDGNDAYTLARLDNILHTW
LDACTEAGLDDTLPLSVVGDYWLSLLDDAGLAQRFFAGSVTFATLMPMRAIPFRRVCLLG
MNDGDYPRTRVPMDFDLMRGYHRPGDRSRREDDRYLLLEALLSARDHLHVSWVGRSINDN
SERPPSVLIGQLRDHLVSGWKLADAPSDKRQALVDALTVVHRLQPFSAEYFSANADTDTS
RLFTYAAEWRDVPSETATPHATPATPATADAPLDAVVRDEPLSLREVADFLRNPVKAFLS
QRLRIALDIQETASDDQEPFELDALDIWKLQDELIGAQVAQVHEDADDPTLVAVRDARLA
VIRRRGDVATGGFGDLASDRLIEPMDKLFDAYRTQLARWPVVHEREQEIGFAVAGEHGQL
AIADWLGHWRADNDGKLARVLLETSELVEGRTRRYRYAKLVRPWVQHLAANLDGREVSTV
IVSKKGTVEFPPMQAGKAAAYLGALLRAWEEGMRRPLPLAVESAFEWIFAGGAPRNDTEP
SRDMTDARHAARRKYEGDGSGFTSGEVEKSASLRRAYPDFESLSASGEFAVLADALLKPL
IDVVKNNAGAEE
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggagtctttcttgacatcgaattccctttctcccgggctgatgctgattcacggcaat
cgctccgagcgccttcgcgatctgctcgtcgaatggatgaagcgcaacccgctcgcgccg
ctcgagaacgaagtgatcctcgtgcagagcaacggtattgcccaatggctcaagctcgcg
ctcgcggctgaccacgatcccatgacggattccggtggctgcgggatcgccgccgcactg
gaaatctcgctgccttccaccttcatctggcaggcgtaccgcgcggtgctgggcaagtcg
tcggtggccgaggtgtcgccgttcgacgagtcgcggctcgtgtggcggttgatgcgcgtg
ctgcccacgctcatcgaccttccggcgttcgagccgctgcgccgcttcatcagtcacgac
gacgatcgccgcaagcgctttcagcttgccgagcgtatcgccgatctgttcgaccagtac
cagatgtatcgcgccgactggctcgaccgctgggcgaaaggcaacgacagcgtgctcgat
gcgcgcggcgaagtgcatccgttgcccgatgaacaacgctggcaggcggcgctgtggcgc
gaactcgtcgcggacgtcgcgaattcggcggatgctgccgcagcgcccgaagcgatgtcg
gatggtggacgcgccgccgttcatcaggcgttccttgcgcgtgtcgaagcgtgggacagc
gacacgcggccgccaggcttgccgcgtcgggtgatcgtattcggcatttcgagcctgccg
cgccagtcgctcgaggcactcgccgccatcgcgcgctggacgcaggtgctgatgtgcgtg
ccgaatccgtgcgcgcactattgggccgacatcgtgccggacaaggagctactgcgcgca
caacattcgcggcagcagcgccgcgtgggcgcgcccgccgaactggctgccgaacaactg
catctgcatgcgcatccgttgctcgcatcgtggggcaagcagggacgcgatttcatcggc
ttgctggacgagttcgacagcgccgaggcacgcgagcgctatcgcccgcaattcgcgggc
atcgggcagcgcatcgacctgttcgaggagcgcgaagcgacgtcactgctgcaacagctg
caggacgatatccgcgatctgcgcccgctgcgcgagacgcaagaggaatggccgcccgtc
gatcccgctgccgacgagtcgatccgctttcacatcgcgcacagcgcgcagcgcgaagtc
gaagtccttcacgaccagctgcttgccgccttcaacgccgacccgaccttgcggccgcgc
gacatcatcgtcatggtgccggacatcgacgcgtacgcgccgcacatccaggccgtcttc
gggctgctcgaccgtgacgatcggcgctacattccgttcagcgtcgccgaccgtggacaa
cgcaaggcggacccgctcgtcggcgcgctcgaaacgctcctcagcttgcagcattcgcgc
ctgacggtgagcgatctgctcgatctgctcgacgtcccggcgctgcgccggcgtttcgcc
atcgacgagagcgatcttccgacgctgcgtgcgtggatgcgcggcgcgaacgtgcgctgg
ggcttgcacgccgagcatcgtgcgagcctcggcttgccgcgcgacgacaacgcggcggcg
ccgcacacctggctgttcggcctgcgccggatgttgctcggctatgcggtgggcggcgaa
acggacgcgtggggcgacatcgagccattcggtgaagtgggtggactcgacgccgcgctg
ctgggtccgatcgtccggctgatcgacgaactcgaccacgcgtggcgcacgatgtgcgag
ccggcaacgcccaccgtatggtgcgagcgcttgcgctcgctgaagcaggcgtttttcagt
gccgacgacggcaacgatgcctatacgctcgcgcggctcgacaacatcctgcacacgtgg
ctcgacgcctgcacggaagcgggactcgacgacacattgccgctttccgtcgtcggcgat
tactggctgagcctgctcgacgacgcgggtcttgcacaacgcttcttcgcgggctcggtc
acgttcgcgacgctgatgccgatgcgcgccattccgttccgccgggtgtgtctgctcggc
atgaacgacggcgactatccgcgcacccgcgtgccgatggatttcgacctgatgcgcggc
taccaccggcccggcgaccgttcgcgtcgcgaggacgatcgttatctgctgctcgaagcg
ctgctgtcggcgcgcgatcatctgcatgtgtcttgggtcggacgcagcatcaacgacaac
agcgagcggccgccgtccgtgctgatcgggcagttgcgcgaccatctcgtttccggctgg
aagcttgccgatgcaccgtcggacaaacgacaagcgctcgtcgatgcgttgacggtcgtg
catcgcttgcagccgttcagcgccgagtatttttccgcgaacgccgacaccgatacgtcg
cggctttttacctatgccgccgaatggcgcgacgtgccgtccgaaacggcgacgccccat
gccacacctgccacacctgccacggctgacgcgccgctcgatgctgtcgtgcgcgacgag
cccttgtcgctgcgcgaagtcgccgatttcctgcgcaatcccgtgaaggcgtttctgtcg
caacgcctgcgcatcgcgctggatatccaggaaacggccagcgacgatcaggagccgttc
gagctcgatgcgctcgacatctggaaactgcaggacgaactgatcggcgcgcaggtcgcg
caagtgcacgaagacgctgacgacccgacgctcgtcgcggtgcgcgacgcgcgtcttgcc
gtcatccggcgacgcggtgacgtcgcgacgggcggattcggcgacctcgcgagcgacaga
ctgatcgagccgatggacaagctgttcgacgcgtaccggacgcaactcgcgcgctggccg
gtcgtgcacgagcgcgaacaggaaatcggctttgcggtggcgggcgagcacggccagttg
gccatcgccgactggcttggccattggcgtgccgataatgacggcaagctcgcgcgcgtg
ctgcttgaaaccagcgaactcgtggaaggacgaacccggcgctatcgctatgcgaagctc
gtcagaccgtgggtgcagcatctcgcggcaaacctcgatggccgtgaagtatcgacggtg
atcgtcagcaagaaggggacggtcgagttcccgccgatgcaagcgggcaaggcggccgcg
tatctcggcgcgttactgcgcgcctgggaggaaggcatgcgcaggccgctgccgcttgca
gtcgagtccgcgttcgaatggatttttgcgggcggcgcgccacgcaacgacacggagcca
tcgcgggatatgacggatgcgcgccatgccgcgcgccggaaatacgaaggcgacggcagc
ggcttcacgtccggagaggtggaaaagagcgcgagcttgcgccgcgcctatcccgatttc
gagagcctgtccgcgagcggcgaatttgcggtgctggccgatgcgctgctcaagccgctg
atcgacgtagtgaagaacaacgcaggagctgaagaatga
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