Paraburkholderia hospita: C2L64_46295
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Entry
C2L64_46295 CDS
T05305
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
phs
Paraburkholderia hospita
Pathway
phs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C2L64_46295 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phs03400
]
C2L64_46295 (recD)
Enzymes [BR:
phs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C2L64_46295 (recD)
DNA repair and recombination proteins [BR:
phs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2L64_46295 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
AAA_22
Helicase_RecD
UvrD-helicase
T2SSE
NTPase_1
SLFN-g3_helicase
AAA_16
UvrD_C
AAA_28
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AUT75742
UniProt:
A0AAN1MQI6
LinkDB
All DBs
Position
4:429325..431433
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AA seq
702 aa
AA seq
DB search
MSALLSENTIAMSGGVGDREQVGQLLADWVERGWLREVDAAFARFLAREVPHAHALLILA
AALASHQLGRGHACLDLVATLRDPAFALSLPPDGPSTRTDDNAEENVLLPSQVLAGVTLA
RWQAALDDTSLVGDGEGSTPLVLVGTRLYLRRYWQYERNVCRAIRQRLEASVELAGTLDV
GGLRHALNSLFPSVETQPKAHADWQKLACALAARSAFSIVTGGPGTGKTTTVVKLLALLQ
SLSLTGEDGKPLRIRLAAPTGKAAARLNESIANAVERLPLDGFANGEAIREAIPVAVTTL
HRLLGTRPDTRRFRHHAGNPLALDVLVIDEGSMVDLEMMNAVLDALPARARLILLGDKDQ
LASVEAGAVLGELCRRAGDGHYTRATQTWLEEATGERIEPRLVDDGGGALDQAIAMLRFS
HRFSAESGIGQLAEAVNGGEPRNVADVWINHHADLALLESAEKGDAAFKALVVDGQVGGQ
TSGEASARRGYRHYLETLHRRQPAHGSGQDMLDAWANDVLAAHGEFQLLCALRRGAWGVE
GLNRRVARLLQDEHLITATGEWYLGRPVLVTRNDYELGLMNGDIGITLALPAPDGGWSLR
VAFAASDGSGRIKWALPSRLQAVETVFALTVHKSQGSEFTHATLVLPDTMSPVLTRELVY
TGITRARRFLTIASAGGRVVIERAVRAQVLRASGLSAGFDAA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctattgtctgaaaacacgatcgcgatgtcgggcggcgtgggtgatcgcgag
caggtcgggcagttgctcgcggactgggtcgagcgcggctggttgcgcgaagtcgatgcc
gcgttcgcgcgctttctcgcgcgtgaagtgccgcacgctcacgcactgctgattctcgct
gctgcgctggccagccatcagctcggacgcggtcacgcgtgtctcgatcttgtcgcgacg
cttcgcgatcccgccttcgcactgtcgctgccgcccgatggcccgagcacacgtaccgac
gacaatgccgaagagaacgtgctgctgccgtcgcaggtgctggcgggtgtcacgctggcg
cgctggcaggcggcactcgacgatacctcgctggtcggcgacggcgagggcagtacgccg
ctggtgctcgtcggcacgcggctttatctgcgccgctactggcagtacgaacggaacgtg
tgccgcgcgattcgtcaacggctcgaagcgtcagtcgaactggcaggcacactggatgtc
ggcggcttgcgccacgcgctgaactcgctgtttccgtcggtggagacgcaacccaaggcg
cacgccgactggcagaagctggcctgcgcgcttgctgcacgaagcgccttcagcatcgtc
acgggcggaccgggtacgggcaagacgaccaccgtcgtgaagctgctcgcgctgcttcaa
tcgctgtcgctcacgggcgaggatggcaagccgctgcgcatccggctcgccgcgccgacg
ggcaaggcggcggcgcggctgaacgaatcgattgccaatgccgtcgagcgtctcccgctc
gacggcttcgccaacggcgaggcgatccgcgaagcgattcccgtcgcggtgactacgctg
caccggctgctcggcacacggcccgatacgcggcgcttccgtcatcacgcgggcaacccg
ttggcgctcgacgttctggtgatcgacgaaggatcgatggtcgatctggaaatgatgaat
gccgtgctcgatgcactgccggcacgcgcgcgcctgattctgcttggcgacaaggatcag
ctcgcatcggtggaggcgggcgcggtcctcggcgaattgtgccgccgcgccggcgacgga
cactacacgcgcgccacgcagacatggctggaagaggcgacgggcgagcgcatcgagccg
cgtctcgtcgacgacggcggcggcgcgctcgatcaggcgattgcgatgctgcgtttcagc
catcgcttctccgccgaaagcggcatcggacaattggccgaagccgtcaacggcggcgaa
ccgcgcaacgtggcggacgtctggatcaaccatcacgcggaccttgcgctgcttgaaagc
gcggagaagggcgacgcggcgttcaaggcgctcgtcgtcgacgggcaggtgggcggccaa
acgagcggcgaggccagcgctcgccggggctatcggcactacctcgagacgttgcaccga
agacagccggcacacggctcggggcaagacatgctcgacgcatgggcgaacgatgtgctc
gccgcgcacggcgaattccagttgctgtgtgcgctgcggcgtggggcgtggggtgtcgaa
ggattgaaccggcgcgtggcgcgtctgcttcaggacgaacacctgattacggcgacgggc
gagtggtatctcgggcgtcccgttctcgtgacgcgcaatgactatgaactgggcctgatg
aacggcgatatcggcatcacgctcgcgctgcccgcgccggatggcggctggagtctgcgt
gtggcgttcgcggccagcgacggctcgggccgcatcaagtgggcgctgccgagccgcctg
caagcggtcgaaaccgtgtttgcgctcaccgtgcataaatcgcaaggttccgagttcacg
catgccacgctcgtgttgccggacacgatgagccccgtcctgacgcgcgagctcgtctat
acgggcattacgcgcgcgcgccgcttcctgacgattgcaagcgcgggcggcagagtggtg
atcgagcgggcggtgcgtgcgcaggtgctgcgcgcgagcggtctgtcggcgggattcgac
gctgcctga
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