Phyllobacterium zundukense: BLM14_09585
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Entry
BLM14_09585 CDS
T05167
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pht
Phyllobacterium zundukense
Pathway
pht03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pht00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BLM14_09585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pht03021
]
BLM14_09585
03400 DNA repair and recombination proteins [BR:
pht03400
]
BLM14_09585
Enzymes [BR:
pht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BLM14_09585
Transcription machinery [BR:
pht03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BLM14_09585
DNA repair and recombination proteins [BR:
pht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BLM14_09585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Biotin_lipoyl_2
RnfC_N
DUF6744
Motif
Other DBs
NCBI-ProteinID:
ATU91847
UniProt:
A0A2N9W4L7
LinkDB
All DBs
Position
complement(1935069..1939277)
Genome browser
AA seq
1402 aa
AA seq
DB search
MNQEVMNLFNPQVPVQAFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKGIERVLYFENYIVTEPGLTALKEHQLLSEEEYMIAVDEYGEDAFTA
LIGAEAIHELLASMDLEKIAGDLRAELAETTSDLKQKKLMKRLKIVENFLESGNRPEWMI
MKIVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKEKPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGLPVIVPSQDMVLGLYYLSIVAAKEPGEGMAFADMGELHHAIG
SGAVTLHTKIKGRFKSIDADGKPTSKIFETTPGRMIIGELLPKHHNVPFDICNQEMTKKN
ISKMIDTVYRHCGQKETVIFCDRIMQLGFSHACRAGISFGKDDMVIPETKAKLVAETEAL
ATEYEQQYNDGLITQGEKYNKVVDAWGKCTEKVADEMMARIKAVEFDPVTGRQKQMNSIY
MMSHSGARGSPNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIVISVDCGTTTGLTMQPIVDAGQVVATLGQRVLGRT
ALEDILHPISGDVLVTGGNIIDEFDVDAIEKAGVQSIRIRSALTCETRGGICAKCYGRDL
ARGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHLGGTAQVVDQSFLEASYEGTVQIRNRN
VVRNSDGHLVVMGRNMAVVILDATGKERATHRVTYGSRIYVDDGDNVKRGQRVAEWDPYT
RPVMTEVEGHVEFEDMVDGLSVTETTDESTGITKRVVIDWRSTPRGSDLKPAIVVKDKAG
KVLKLAKGGDARFQLSVESILSVEPGSHVKAGDVLARIPMESAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGTVRFGRDYKNKRRIVIEPNDETLEPVEYLIPKGKPFHLQDGDAIE
KGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVE
ITESGDTGFIPGDHVDRIELDEINERLEEDGKKPGYGTPVLLGITKASLQTPSFISAASF
QETTRVLTEAAVAGKMDALQGLKENVIVGRLIPAGTGGTVKQIRRIAGARDELIIDERRK
ESGATAVKAGPMLTDMTGQPAE
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatcttttcaatcctcaggtgcctgtgcaggcattcgattcc
atccggatttcgatcgccagccctgagaagattctgtcctggtcatacggtgagatcaag
aagccggagacgatcaactaccgcaccttcaagccggagcgggatggtctcttctgtgct
cggatcttcgggccgatcaaggactatgaatgcttgtgcggcaagtacaagcgcatgaaa
tacaagggcatcatctgcgaaaagtgcggtgtggaagtcacgctgtcacgcgttcgccgt
gagcgcatgggccatatcgaactcgcagctccggttgcgcacatctggttcctgaagtct
ttgcccagccgtatcggcacgttgctcgacatgaccctcaagggcatcgagcgcgttctc
tatttcgagaactacatcgtgaccgagccaggcctgactgcccttaaggagcaccagctc
ctttcggaagaagaatacatgatcgcagtcgatgagtacggtgaggacgccttcaccgct
ctgatcggcgcggaagccattcatgaacttctggcttcgatggatctggagaagatcgcc
ggcgatctgcgtgcagaactcgccgagaccacttcggatctgaagcagaagaagctgatg
aagcgtctgaagatcgtcgagaacttcctggagtcgggcaaccgtccggaatggatgatc
atgaagatcgttccggtcattccgccggacctgcgtcctctggttccgttggatggcggc
cgttttgcaacgtccgatctgaacgatctttatcgccgcgtgatcaaccgtaacaaccgt
ctgaagcgcctgatcgaactgcgcgctcccggcatcatcatccgcaacgagaagcgcatg
cttcaggaatcggttgatgcgttgttcgacaatggccgtcgcggccgtgttatcaccggt
gccaacaagcgtccgctgaagtcgctgtccgacatgctcaagggcaagcagggccgcttc
cgtcagaacctgctcggcaagcgcgtcgactattccggccgttcggtcatcgtgaccggt
ccggaactgaagttgcaccagtgcggtctgccgaagaagatggcgctcgaactgttcaag
ccgttcatctatgcccgtcttgacgccaaggggtattcctcgaccgtcaagcaggcaaag
aagctggttgaaaaggaaaagccggaagtctgggatattcttgacgaggtcatccgcgag
catccggttctcctgaaccgtgcgccgacgctgcaccgtcttggtatccaggcattcgaa
cccaccctgatcgaaggcaaggcaatccagctgcatccgctcgtctgtaccgctttcaac
gcggacttcgacggtgaccagatggctgttcacgttccgctttccctggaagcgcagctt
gaagcacgcgttctgatgatgtcgacgaacaacatcctgcatcccgcaaacggtctgccg
gttatcgttccgtcgcaggacatggttctggggctgtactatctgtcgatcgttgcggct
aaggagccgggcgagggcatggcctttgccgatatgggcgaacttcaccatgccatcggc
agcggtgctgttaccctgcacaccaagatcaagggccgcttcaagagcattgatgcggac
ggcaagccgacgtcgaagattttcgagaccacgcctggccgcatgatcatcggtgagctt
ctgccgaagcatcacaatgtgcctttcgacatctgcaatcaggaaatgaccaagaagaac
atctccaagatgatcgacacggtctatcgccattgcggtcagaaagagacggtcattttc
tgcgatcgcatcatgcagctcggcttcagccatgcctgccgcgccggtatttccttcggc
aaggacgacatggtcattccggaaaccaaggcgaagctggttgctgaaaccgaagctttg
gcaaccgaatatgagcagcagtacaatgacggcctgatcactcagggcgagaagtacaac
aaggtcgttgacgcttggggcaagtgcaccgagaaggtcgccgatgaaatgatggcgcgc
atcaaggccgtcgagttcgatcctgttactggccgccagaagcagatgaattcgatctac
atgatgtcgcactccggtgctcgtggttcgccgaaccagatgcgtcagctgggcggtatg
cgcggtctgatggccaagccttcgggcgaaatcatcgaaacgccgatcatttcgaacttc
aaggaaggcctgaccgtgaacgagtacttcaactcgacccacggtgcccgcaagggtctc
gccgacaccgccttgaagacggctaactccggttatctgacacgccgtcttgttgacgtc
gcgcaggattgcattgtcatctccgtggattgcggcacgacgacgggcctcaccatgcag
ccgatcgttgatgccggccaggttgttgcgaccctcggccagcgtgttctcggccgtacg
gcactcgaagacatcctgcatccgatttcgggcgacgtgcttgtcaccggtggcaacatc
atcgacgaattcgatgtcgatgccatcgagaaggctggcgttcagtcgatccgcatccgt
tcggctcttacctgtgagacccgtggcggcatctgcgccaagtgctacggccgcgatctg
gcccgtggtacgccggtcaaccagggtgaagctgtcggcgttatcgctgctcagtcgatc
ggtgagccaggcacgcagttgacgatgcgtacgttccaccttggtggtacggcacaggtg
gtcgatcagtcgttcctcgaagccagctatgaaggcaccgtgcagatccgcaaccgcaac
gtggtgcgtaactctgatggccatctggtcgtcatgggccgcaacatggccgtcgtcatc
ctcgatgcgaccggcaaggaacgcgctacacaccgcgtcacctacggttcgcgtatctat
gtcgatgacggcgataacgttaagcgtggccagcgtgtggccgagtgggatccgtatacc
cgtccggtcatgacggaagtcgaaggtcatgtcgaattcgaagacatggtcgatggcctc
tcggttacggaaacgacggacgagtccaccggtatcaccaagcgcgtggttatcgactgg
cgttcgaccccgcgcggttcggatctgaagcctgccatcgtcgtcaaggacaaggccggc
aaggttctgaaacttgcaaagggtggcgatgcacgcttccagctgtccgtggaatcgatc
ctttcggtcgagcccggctcgcacgtgaaggcgggtgacgttcttgcccgtattccgatg
gaaagcgccaagaccaaggacatcaccggtggtctgccgcgcgttgcggaactgttcgaa
gcccgtcgtccgaaggatcatgcgatcatcgccgaaatcgatggtacggttcgcttcggc
cgcgattacaagaacaagcgtcgcatcgtcatcgaaccgaacgacgagacgcttgagcct
gtcgagtatctgatccccaagggcaagcctttccatcttcaggacggcgatgccattgaa
aagggcgattatatcctcgacggcaacccggcaccgcatgacatcctggccatcaagggc
gtggaggctctggcttcctacctcgttaacgaaatccaggaagtctatcgtttgcagggc
gttctgatcaacgacaagcacatcgaagtgattgttcgtcagatgctgcagaaggtcgag
atcaccgagtccggcgacaccggcttcatccccggcgatcatgttgaccggatcgagctg
gacgaaatcaacgagcgtcttgaagaggatggcaagaagccaggctacggcactcctgtg
ctgctcggcatcaccaaagcctcgctgcagacgccgtcgttcatctcggcagcgtccttc
caggaaacaacgcgcgtcctcacggaagccgctgttgccggcaagatggatgctctgcag
ggcctgaaggaaaacgtcattgttggacgtctgatcccggcaggtaccggcggcacggtc
aagcagatccgccgcattgccggagcccgcgacgagttgatcatcgacgagcgccgcaag
gagtcgggtgcaacggctgtgaaggctggcccgatgctgacggacatgacaggccagccg
gccgaataa
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integrated database retrieval system
