Phyllobacterium zundukense: BLM14_10230
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Entry
BLM14_10230 CDS
T05167
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pht
Phyllobacterium zundukense
Brite
KEGG Orthology (KO) [BR:
pht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pht03032
]
BLM14_10230
03400 DNA repair and recombination proteins [BR:
pht03400
]
BLM14_10230
Enzymes [BR:
pht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BLM14_10230
DNA replication proteins [BR:
pht03032
]
Prokaryotic type
DNA Topoisomerases
BLM14_10230
DNA repair and recombination proteins [BR:
pht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BLM14_10230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ATU91964
UniProt:
A0A2N9W499
LinkDB
All DBs
Position
2057748..2060360
Genome browser
AA seq
870 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGSGYKVLASFGHVRDLPAKDGSVRPDDDFSMSWEVDSASAK
RLSDIVKALKESDGLILATDPDREGEAISWHVLEVLQQKKAIGKKPVKRVVFNAITKGAV
LDAMANPRDIDMPLVDAYLARRALDYLFGFTLSPVLWRKLPGARSAGRVQSVALRLVADR
EAEIERFVREEYWNIAALLKTPRNDGFEARLVSVDGKKLGKLDIKNGEQAGEIRTMLEGA
SFKAASVEAKPIKRSPGPPFTTSSLQQAASGQLGFSASRTMQIAQKLYEGMDLGTETAGL
ITYMRTDGVQMAPEAVQAARQTIAKVFGEKYVPEKPRYYATKAKNAQEAHEAIRPTDFNR
HPKDVRQFLDADQARLYELIWKRAIASQMQSADIERTTVEIDAQNGSRLAQLRATGSVVR
FDGFLGAYMDHREEEDVDEDSARLPEIRAGEALAREKINATQHSTEPPPRYSEATLIKKM
EELGIGRPSTYASTLATLRDREYITIDKRKLIPEAKGRLVIAFLESFFKRYVEYDFTADL
EEKLDEISDGKLKWKDVLRDFWTDFFGSVDGIKELRVTNVLDALNDQLGPLVFPPREDGS
DPRICQLCGTGNLSLKLGKYGAFVGCSNYPECKFTRQLGGSEAANENGNGGDEPKLLGKD
PYTDEDITARNGRFGPYIQRGEGKEAKRASLPKGWTLDTIDHEKALALLSLPRDVGQHPE
TTKMISAGIGRYGPYISHDGTYANLESAEDVFSIGLNRAVTVLAEKQAKGPGRGRGTPAA
LKDLGEHPDGGVITVRDGKYGPYVNWGKVNATLPKGKDPAVVTVEEALAMIAEKAGSKGT
KRAPAKKAAAAKKPAAKKPAAKKAATKKAS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgtcgtcgttgaatcgcctgccaaggccaaaacaatcaacaaatatctgggt
tcgggctacaaggtcctggcgtcgttcggccatgtgcgggatctgcctgccaaagacgga
tccgtccgccctgatgatgatttctcgatgtcctgggaagtcgactcggcatcggcgaag
cgactgagtgatattgtcaaagccctcaaggagagcgacggactcattctcgcaaccgac
ccggatcgcgagggtgaggctatttcctggcatgtactcgaggtcctgcagcagaaaaag
gctatcggcaagaagccggtcaagcgggtcgtcttcaacgcgatcaccaaaggcgcagtg
ctggatgccatggccaatccacgcgacatcgatatgccgctggtcgatgcctacctggcc
cgccgtgcgctggactatctgttcggtttcacgctgtcgccggtactctggcgcaaattg
cccggagcacgctccgcaggccgcgttcagtcggtggcattgcgtctcgttgctgaccgc
gaagccgagatcgagcgtttcgttcgcgaggaatactggaatatcgccgcgctcttgaag
acgccgcgcaatgacggtttcgaagcgcgcctggtttccgtcgatggcaagaagctcggc
aagctcgacatcaagaatggtgaacaggctggcgaaatccgcaccatgctggaaggtgct
tctttcaaggcggcttccgtcgaagcaaagccgatcaagcgcagccctggccctcccttc
accacatcgagcttgcagcaggccgcctccggccagctcggcttttctgcatcacgcacc
atgcagatcgcacaaaagttgtatgaaggcatggatctcggcaccgagaccgcaggtctg
atcacctacatgcgtacggatggcgttcagatggcgccggaggctgttcaggctgcacgc
cagacgatcgccaaggtattcggcgaaaaatacgtgccggaaaagccacgctattatgcg
accaaggccaagaatgcccaggaagctcacgaagcgatccgtccgacggatttcaaccgg
catccgaaggatgtacggcaattcctcgatgcagatcaggcaagactctacgagctgatc
tggaagcgcgccatcgccagccagatgcagtcggcagatatcgaacggacgaccgtggaa
attgacgcacagaatggttcgcgtctggcacaattgcgtgccacgggttcagtcgtcaga
ttcgatggcttcctcggagcctatatggatcaccgcgaggaagaggatgtcgatgaagac
agtgcccgtcttccggaaatccgtgccggcgaggccctcgcccgcgaaaagatcaatgcg
acccagcattcgaccgaaccgccgccgcgctattcggaagccacacttatcaagaagatg
gaagagctcggcattggccgcccttccacctacgcatcgacgctcgccaccttgcgcgac
cgtgaatacataacgatcgacaagcgcaagctgatccccgaagccaagggccggctggtc
atcgcgttcctggaaagtttcttcaagcgttacgtggaatatgatttcaccgctgatctt
gaagaaaagctcgacgagatttccgatggcaagctcaagtggaaggatgtcctgcgcgat
ttctggacggatttcttcggatccgtcgatggtatcaaggaactgcgcgtcaccaatgta
ctggatgcgctgaatgaccagcttggaccgctcgtcttcccgccacgcgaagacggcagc
gatccccgtatctgtcagctctgcggtaccggaaatctttcgctgaagctcggcaaatac
ggcgccttcgtcggttgctcgaactatcccgaatgcaagttcacgcgccagctcggtgga
agtgaagcggccaatgaaaacggcaatggcggggacgaaccgaagctgctcggcaaggac
ccctacaccgacgaggacattaccgcacgcaatggccggtttggtccttatatccagcgc
ggcgaaggcaaggaagccaagcgcgccagcctgccaaagggctggacgctcgacacgatc
gatcatgagaaggcattggcactgctgtccttgccgcgtgatgtcggccagcacccggaa
accaccaaaatgatctccgccgggatcgggcgctatggcccctacatctcgcatgatggc
acctatgccaatctggaaagcgcggaagatgtcttttcgatcggtctcaaccgggctgtt
acagtccttgccgagaagcaggcaaagggaccgggacgtggccggggtacgcctgcggct
ctcaaagaccttggcgagcatcccgatggtggcgttatcacggtgcgcgacggcaaatac
ggcccctacgtcaattggggcaaggtgaatgccacgctgccgaagggcaaggacccggcg
gtggtgaccgtcgaggaagctcttgctatgatcgctgaaaaggcgggctccaaaggcacg
aaaagagcgccggccaaaaaggcggcagcagccaaaaagccagccgccaagaaaccggcg
gcgaaaaaagctgcaaccaaaaaagcaagttaa
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