Phyllobacterium zundukense: BLM14_10965
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Entry
BLM14_10965 CDS
T05167
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pht
Phyllobacterium zundukense
Brite
KEGG Orthology (KO) [BR:
pht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pht03016
]
BLM14_10965
Enzymes [BR:
pht01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BLM14_10965
Transfer RNA biogenesis [BR:
pht03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BLM14_10965
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
CecR_C
Motif
Other DBs
NCBI-ProteinID:
ATU92095
UniProt:
A0A2N9W3W3
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All DBs
Position
2207718..2208878
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AA seq
386 aa
AA seq
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MTMITTTDQLEQAVAALSQSDFVTVDTEFIRETTFWPELCVIQLASPDHTAIVDALAPGL
DLAAFFKLMADEKIVKVFHAARQDIEIIFHLGNLIPHPVFDTQVAAMVCGFGDAIAYDQL
VQRVVGAQIDKSSRFTDWRRRPLSEKQLDYALADVTHLRDIYLHLKASLEEEGRTDWVLD
EMKILTARETYDMHPDDAWKRLKMRLRKPVELAVLRSVAAWREREARERNVPRGRVLKDD
AIYEIAQQQPRDAEAMSRLRTIPKGWERSSMATGLLNAVNLALDLPKEDMPRLPKSVQSP
EGAGAAAELLKVLLRLVTEEHGVAAKVVATSDEIDRIAAEGDVEDIPALQGWRREVFGEK
ALQLINGALCLKFENKKIRAVAWPAE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgattacaaccacagatcagcttgaacaggctgttgccgccctttcgcaatcc
gatttcgtgaccgtcgatacggaattcatccgggagaccacgttctggccggagctctgc
gtcatccaattggcctctccggatcacacggcgattgtcgatgcgctggcgcctggcctt
gatcttgcagcgtttttcaagctgatggccgatgaaaagatcgtcaaggtgttccatgcc
gcccgccaagacatcgaaatcatcttccatctcggcaatttgatcccgcatccggtattc
gacacacaggttgcagcgatggtttgcggttttggcgatgcaatcgcctacgaccagctg
gtgcagcgggtggttggagcgcagatcgacaaatcctcgcgttttaccgactggcgccgc
cgccccctctccgagaagcagctggactacgcgctggcggacgtgacccatttgcgcgac
atctatctccacctgaaagccagtcttgaagaggaaggccggacggactgggttctcgac
gagatgaagatcctcaccgcccgggagacctatgacatgcacccggacgatgcgtggaag
cggctgaagatgcgcctgcgcaagccggttgaacttgccgtattgcgcagcgttgccgcc
tggcgggaacgggaagcgcgcgaacgcaatgtgccgcgcggccgtgtcctgaaggacgac
gcgatctacgagatcgcacagcagcagccgcgcgatgcggaagccatgtcgcgtttgcga
acgattccaaagggttgggagcgctccagcatggcaaccggtctgctcaatgccgtcaat
ctggcactcgacctgcccaaggaggacatgccgcgcctgccgaaatccgtacagtcgccc
gaaggcgcaggcgctgcggcggaactgctgaaagtgctgttgcggctggtcaccgaggag
cacggcgttgccgccaaggtggtcgcgacctccgacgaaatcgacagaatcgcggcggaa
ggcgatgtggaggacattccggcgctgcagggctggcggcgcgaggtcttcggcgaaaag
gcgctgcagctcatcaatggcgcactttgcctcaaattcgaaaacaagaaaatccgcgca
gtagcttggcccgctgaataa
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