Phyllobacterium zundukense: BLM14_15710
Help
Entry
BLM14_15710 CDS
T05167
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pht
Phyllobacterium zundukense
Pathway
pht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLM14_15710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pht03019
]
BLM14_15710
03016 Transfer RNA biogenesis [BR:
pht03016
]
BLM14_15710
Enzymes [BR:
pht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BLM14_15710
Messenger RNA biogenesis [BR:
pht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BLM14_15710
Transfer RNA biogenesis [BR:
pht03016
]
Prokaryotic type
tRNA degradation factors
BLM14_15710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
ATU92905
UniProt:
A0A2N9VSM3
LinkDB
All DBs
Position
complement(3172570..3174711)
Genome browser
AA seq
713 aa
AA seq
DB search
MFNQHKVEIEWGGRPLILETGKIARQADGAVLATYGETVVLATVVSAKEPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFADGYKNDTQVVLTVIQH
DLENNPDIVSMIGASAALTLSGVPFMGPIGAARVGYIGGEYKLNPTVDEMVESSLDLVVA
GTGDAVLMVESEAKELAEDVMLGAVMFGHKNFQPVIDAIIKLAEVAAKEPRDFHAEDLSA
VEAAVLTVAEADLRAAYNIIDKQQRYAAVDAAKAKVKAHFFPEGVEEPEFSAEQIATVFK
SVQAKIVRWNILDTGSRIDGRDLSTVRQIVSEVGLLPRTHGSALFTRGETQAIVVATLGT
GEDEQYVDSLTGMYKETFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPVLPAK
EQFPYTLRTVSEITESNGSSSMATVCGTSLALMDAGVPLLRPVAGIAMGLILEGEKFAVL
SDILGDEDHLGDMDFKVAGSENGITALQMDIKIDGITEEIMKVALAQAKDGRIHILGEMA
KAITEGRSELGEFAPRIEVMNIPTDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTVKIA
SSSAKEIEAARKWIHSIVAEPEVGEIYEGTVVKTADFGAFVNFFGPRDGLVHISQLASDR
VAKTSDVVKEGQKVWVKLMGFDERGKVRLSMKVVDQETGKEIVQEKKAQEDAE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcaacacaaagttgaaatcgaatggggcggtcgtccgctcattctcgaaacc
ggcaagatcgcccgtcaggctgacggcgccgttctcgccacctacggtgagactgtcgta
ctcgctaccgtcgtttccgccaaggaaccgaagccaggccaggacttcttccccctgaca
gtcaactatcaggaaaagacttacgccgccggcaagatcccaggtggctatttcaagcgc
gaaggccgtccgagcgaaaacgaaacgctggtttcgcgcctgatcgaccgcccgatccgc
ccgctcttcgctgacggctacaagaacgacacacaggttgttctgacggttatccagcac
gatctcgaaaacaaccccgacatcgtctcgatgatcggtgcttccgctgccctgacgctt
tccggcgtacctttcatgggcccgatcggcgccgcacgcgtcggctacatcggcggtgaa
tacaagctgaacccgaccgttgatgaaatggttgaatcgagcctcgatctggttgttgcc
ggtacaggcgatgcagttctgatggttgaatcggaagccaaggaattggctgaagacgtt
atgctcggcgctgtgatgttcggtcacaagaacttccagccggtcatcgacgcgatcatc
aagctcgctgaagttgctgcaaaagagccacgcgacttccacgcagaagacctttctgca
gtcgaagctgctgtgctgacggttgccgaagcagatctgcgcgcagcctacaacatcatc
gacaagcagcagcgttatgctgccgtcgatgccgccaaggccaaggtcaaggcgcatttc
ttcccggaaggcgttgaagagccggaattttctgcagagcagatcgcgactgtcttcaag
tcggttcaggcgaagatcgttcgctggaacattctcgacacgggcagccgcatcgatggc
cgtgacctttcgaccgtacgccagatcgtttccgaagtcggccttctgccgcgcacccat
ggttcggccctgttcacccgcggtgaaacacaggccatcgtggttgcaacgctcggcacc
ggcgaagacgagcagtatgtcgactctctgaccggcatgtacaaagaaaccttcatgctt
cactacaatttcccgccctattcggtcggtgaaacaggtcgcatgggttcgcccggccgc
cgcgaaatcggtcatggcaagctcgcttggcgcgctatccacccggttctgcctgccaag
gaacagttcccctacacgctccgtacggtctccgagatcaccgaatccaacggttcgtcc
tcgatggcaacggtttgcggcacatcgctggctctgatggatgcgggtgttccgctgctc
cgtccggttgccggtatcgccatgggcctgatcctcgaaggcgagaagttcgctgttctc
tccgacatcctcggcgatgaagatcatctcggcgacatggacttcaaggtcgctggttcc
gagaacggtatcacggctctccagatggacatcaagattgacggcatcaccgaagagatc
atgaaggttgccctggcccaggccaaggacggccgtatccacatcctcggcgaaatggcg
aaggccatcaccgaaggccgttcggaacttggcgaatttgcaccgcgcatcgaagtcatg
aacattccgacagacaagatccgtgacgttatcggttccggcggcaaggtcattcgcgaa
atcgtcgaaaagaccggcgcgaagatcaacatcgaagacgatggcacggtcaagatcgca
tcgtcctcagccaaggaaatcgaagctgcccgcaagtggatccattccattgttgccgaa
ccggaagtcggcgaaatctacgaaggcacggtcgtcaagacggctgacttcggcgcattc
gtcaacttcttcggaccgcgcgatggtctcgtccatatctcgcagctcgcttcggatcgt
gttgccaagacttcagatgtggtcaaggaaggccagaaggtctgggtcaagctcatgggc
ttcgacgaacgtggcaaggttcgcctgtcgatgaaggttgtcgatcaggaaaccggcaag
gaaatcgttcaggaaaagaaggctcaggaagacgctgagtaa
DBGET
integrated database retrieval system
