Pediculus humanus corporis (human body louse): Phum_PHUM003190
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Entry
Phum_PHUM003190 CDS
T01223
Name
(RefSeq) Pinin, putative
KO
K13114
pinin
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03013
Nucleocytoplasmic transport
phu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Phum_PHUM003190
03015 mRNA surveillance pathway
Phum_PHUM003190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM003190
03041 Spliceosome [BR:
phu03041
]
Phum_PHUM003190
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
Phum_PHUM003190
Spliceosome [BR:
phu03041
]
Complex C
Other components
EJC/TREX
Phum_PHUM003190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
8233355
NCBI-ProteinID:
XP_002422615
UniProt:
E0V921
LinkDB
All DBs
AA seq
659 aa
AA seq
DB search
MLNLSKIQLELERAKEKLRNVEETIQKVEGKTFSNGPIRYGNIKVELHTDKNKHIGAFDD
SKNQRRRVIASAIDSRIQRPIPEDGSFNLKRGISGDVRPQGPALPSRVFTTATEAPSRQE
VIAAQTVDEQSKQRHKRMFGALVGTLQKFRKEETRVREREEKRLKVEKKLEEDAKREKEK
LMQEKRELFLEKKRREVEIKRIEWSLNRVKEYEAWEANVIPLKNFIQTQAKPHLFYLPCV
HNDKTEERLVISQKLVEKMIEKRKNNLKEEIENSEKKARKTATEVVEEEEEAENIPESNE
ETHAEEHLTREDFENENKENGYLVEDVKKHVDSEKMNQVEEMKERSKMKDSDKKNERDEM
NKEEEQNDSREDLSMTRTDESNIKPDDSYQEVSNPVPVEESENQYNVDNENPINSPRQND
EENKGGNGENDKDDVESNRIHTEKEDTVEESRPEILNQVPAVSSDENINEDKVMRENEGS
DDDKKKNLEDTNDKPNEIVLDNNLKPEDSSSDKKELESESENKTEEMKKVRKAVKKRGVE
KDRGVERTRGGGVRGVREKDRDPRDFLREIKVTGGDRVPEGGKHSERGVVRIHRRENREN
RGLHFPKGVGGVRRILRENDRPTSEVGGVHQKVPFPVRREKENRNRPRRRIPIKKIIYI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatttatctaaaattcagttagaacttgaacgggcgaaagaaaaattaagaaat
gttgaagaaacaattcaaaaagtagaagggaaaacattttcaaatggcccaattcggtat
ggtaacataaaagttgaattacatacagataaaaacaaacatattggtgcctttgatgat
tccaaaaatcaaagaaggagagttatagcctctgctattgattcaagaattcaaagacca
attccagaagatggttcctttaatttaaagaggggaataagtggtgacgtcagacctcaa
ggacctgcattgccatcgagagttttcaccacagcaacagaagcaccttctcgtcaagaa
gtaattgctgctcaaacagtagatgaacaaagcaagcaaaggcataaaagaatgtttgga
gcccttgttggaactttacaaaaatttcgtaaagaagaaactagagttagggaaagagaa
gaaaaaagattaaaagttgagaaaaaattagaagaagatgctaaaagagaaaaggaaaaa
ttaatgcaagaaaagcgggaactctttttagaaaagaaaagacgagaagttgaaataaaa
agaatagaatggagtttgaatagagtcaaagaatacgaagcttgggaagcaaatgttatc
cctctgaaaaatttcattcaaacccaggcaaaacctcatttattttacttaccatgtgtt
cacaatgataaaacagaagaacgtttggtcattagtcaaaaattagtagaaaaaatgatt
gaaaaaagaaaaaataatcttaaagaagaaatagaaaacagcgagaaaaaggcgaggaaa
acggcaaccgaagttgttgaagaagaagaagaggccgaaaatattccggaaagtaatgag
gaaacccatgccgaagagcatttgactcgtgaagatttcgaaaatgaaaacaaagaaaat
ggatacctcgttgaagatgttaagaagcatgtcgattcggaaaaaatgaatcaggtggaa
gaaatgaaggagagaagtaaaatgaaagattccgataaaaaaaatgaaagggatgaaatg
aataaggaagaagagcaaaatgacagcagagaagatttatcaatgacccgaacggatgaa
tcgaatataaaacccgatgacagttatcaagaagtatcgaatccggttccggtagaagaa
tctgaaaatcagtacaatgtagataacgaaaatcccattaattccccccgacaaaacgat
gaagaaaacaagggtgggaacggagaaaacgacaaagatgatgtggaatcgaatcgtatt
catacggaaaaggaagataccgtggaagaatcgagacccgaaattctaaaccaagtgccc
gcggtatcaagtgatgagaacattaacgaagacaaagtaatgagggaaaacgagggatcc
gatgatgataagaaaaaaaatttagaggataccaatgacaaaccaaacgaaatcgtttta
gataataatttaaaaccggaggactcctcctccgataaaaaagaactcgaaagtgaaagt
gaaaacaaaacggaggagatgaaaaaagtgcgaaaagcagtgaaaaaacgaggcgtagag
aaagatcgaggagtagaaaggacgagaggagggggcgttcgaggagtccgagaaaaagat
cgagatccccgagattttcttcgagaaataaaagttacaggaggagatcgagttcccgaa
ggaggaaaacactcggaaagaggagtcgttcgaattcaccgtcgagaaaatcgagaaaat
cgaggtctccattttccaaaaggggtcggaggagtgcgacgaattcttcgagaaaacgat
cgccccacgtcagaagtcggaggagttcatcaaaaagttccgtttccggttcgccgagaa
aaagaaaatcgaaatcgtcctcgtcgtcggattccgattaaaaaaattatttatatataa
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