Pediculus humanus corporis (human body louse): Phum_PHUM035230
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Entry
Phum_PHUM035230 CDS
T01223
Name
(RefSeq) RNAse H, putative
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Phum_PHUM035230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phu03009
]
Phum_PHUM035230
Ribosome biogenesis [BR:
phu03009
]
Eukaryotic type
Pre-60S particles
RNases
Phum_PHUM035230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
8232311
NCBI-ProteinID:
XP_002423076
UniProt:
E0VAD2
LinkDB
All DBs
AA seq
1184 aa
AA seq
DB search
MLPSRGYFKKNDCPFFINNICERPHCHYRHKKVISENSSSSDSQDNSCQSPTNIPDRLSS
NAENYVPPEINKNITTNDSQHSSASSKENETSHDSLFAKLVNQSNPYGKTSRHIPCAYTP
TPQITSVQPKNRAVSAKINVHSSTGLDRLAKTEKYSGGYNLVDKENNSSYTPSSNNNLNT
LKNISNNFTNNESNSEYSVESASNTNSSNDSHYSYSVFDDKNVNSLSYEPQSATKSIINS
LNSNLSEGCSTSYVPSKTTISESKYEPKCSDSSLPNDYVPSKEKCQKNQYVPEGSTSVEN
EVMYKPSDKSSLGETPYQPNVDNIVADYIPTKKSATNSSNHHSWLDKDQSKWTEFDFISS
EIEMMKKLLSEDEKPQNVQEGTEESISNNKKKESEKEKSCNSSKSRHSSSSRHKSKSSSR
SHSRSRSKSRHLQSSNSKHSSRSSSSSRHHSSSSSKHHSPSSSSSKKSSDHNKNSSDEKK
KKSSSHSRSSSHKSSRHRHRHSHSKSDRREKESRSSEKKSIDNVNLVSSDDDASKDVGSK
NVSDEEGSEIENESDTKKRKNVWNEKDKDHKLIKISEEESFYDFDDDPETVEKECLEIFN
SYSTPSDSNEKKSNEITIPSEDYESTTLGKKRKAHSTDVLSDHSVLRMKTVKKPNTIKSA
QEVMLERYKIIEKAKESSTPVPTSTHSAPIPGLNRSNVRIAAVSNIQQMLEAKKALQEKI
SQKSKVNEKPTVAQTVARGGTRVAHSVSSKTTITSGSKVIPPVKRQIYLDKLILETSQIY
PTKEESEEEALKMEEEVFKAHSGSLAAYHSSFVSLLMKTRRRVSAVKGSTTSNASKPKMS
HYDVLARGKKNFSVLKTKRLDISMLTERHIYEELLRCKLTPEELKTNSYPLEGSKPGYAI
CTLNFELKYNAHYLHIKKLTGNRRYCVRCSKEYEVHPVTLKQYIEGPDTCSYHPGKKKSG
GRNSERIYNCCNSSSTEGCASHVRHVTDCNDYDNLPNCVKTLSKDDLTDPGVFALDCEMV
YTRLGYELARVTVVNLKKEIVYDTLVKPKYPIECYNTFYSGIEEKMMEGVTTTLKDVQAV
LLSMFSNKTILIGHSLDSDLRALHLIHDTVVDTAIFYKHEKFHPYKYSLRELCARKISKI
IQENVGGHDSAEDAIAALEIMLNHVKEEVSKYDSLESYEADKIQ
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgtccagaggttattttaaaaaaaacgattgtccttttttcatcaataatata
tgtgaacgacctcattgccattatcgacataagaaagtcataagcgaaaattcatcaagc
tcagattctcaagataactcatgtcaaagtcctacaaatattcctgacagacttagttca
aatgctgaaaattatgttccacctgaaataaataaaaatataacgacaaatgattcacag
cattcctctgcaagttcgaaagaaaatgaaacaagtcacgattcactttttgccaaatta
gttaaccaatcgaatccttatggaaaaaccagcaggcatattccttgcgcatacactcct
actcctcaaatcacaagtgtacaaccgaagaatagagctgttagtgctaaaattaatgtt
catagttcaacaggtttagatagattagctaaaactgaaaaatatagtggtggttacaat
ttagtcgataaagaaaataatagtagttatactccaagttcgaataacaatttaaacact
ttaaaaaacatttctaataattttactaataatgaatcgaatagtgaatattcagtcgaa
tcggctagcaatacaaattcttctaatgattctcattatagttattctgttttcgatgat
aaaaatgtaaattcactttcatatgaaccacaatcagccacaaaatcaatcataaatagc
ttaaatagtaatttatctgaaggttgttcgactagttatgtgccaagtaaaaccacaata
tcagaaagtaaatatgaaccaaaatgcagtgattcttcattgcccaatgactatgttcct
agcaaagaaaaatgtcaaaaaaatcaatatgttcctgaagggagtacctcggttgaaaat
gaagttatgtataaaccttcagacaaatcctctttgggtgagactccttatcagcctaat
gtagataatattgtagctgattatattcccactaaaaaatcagcaacaaattcttctaat
catcattcgtggttagataaagaccaaagtaaatggactgaattcgatttcatatcatca
gaaattgaaatgatgaaaaaattactcagtgaagatgaaaaaccacaaaatgtacaagaa
gggactgaggaatccattagcaataataaaaaaaaagaaagtgaaaaagaaaaaagttgt
aattcttcaaagagcaggcacagttcaagttcaagacataaatctaagtcatcgagtcgt
agtcatagccgttctaggtcaaagtctaggcatttacaatcatcaaattcaaaacattct
tcccgatcatcaagttctagtcgacatcattcttcatcaagttctaaacatcattcacct
agtagtagtagtagtaaaaaatcttcagatcacaataaaaattcttcagacgaaaaaaaa
aagaaaagtagcagccatagccgaagtagctctcataagagttcccgacatcgacaccgt
catagtcattctaaatctgatagaagggaaaaagaaagccgcagttctgaaaaaaaatcc
attgataatgttaatttagtatccagtgacgatgatgcttcaaaggatgtaggtagtaaa
aacgtatcagacgaagagggaagtgaaattgaaaacgaatccgatacgaaaaaaagaaaa
aatgtctggaatgaaaaagataaggatcacaaattgatcaaaatttcagaagaggaatca
ttctacgattttgatgatgatccggaaaccgtcgaaaaagaatgtctggaaatatttaat
agttattcaaccccgtcagattctaatgaaaaaaaatcaaatgaaataacgatacccagc
gaagattatgaaagtacaactcttggaaagaaaagaaaagctcattctactgacgttctg
tctgatcattcagttttgagaatgaaaaccgttaaaaagccaaacacaatcaaatccgcc
caggaagttatgttagaaagatataaaataattgaaaaagccaaagaaagttcaacccct
gtcccaacatcgactcactctgctccaattccaggattgaatcgttcgaatgtgagaatt
gctgccgtttcaaatatacaacaaatgttagaagcaaaaaaagccttacaagaaaaaatt
agtcaaaaatcaaaagttaacgaaaaacctactgtcgcccaaaccgtcgctagaggtggc
acaagagtggctcattcggtttcttcaaagactacaataacctctggatcaaaagttatt
cctcccgtaaagagacaaatttaccttgacaaattgatactcgaaacaagtcaaatttat
ccgaccaaagaagaatccgaagaagaagctttaaaaatggaggaagaagttttcaaagct
cattccgggtcgcttgcagcttatcattcttctttcgtttccttactgatgaaaactaga
agaagggtttctgcagtcaaaggaagtacgacttcaaatgcctcaaaacctaaaatgtca
cactacgacgttcttgctagaggaaagaaaaactttagcgttttaaaaactaaaagactg
gatataagcatgctaacagaacgacacatttacgaagaactcctcagatgtaaattgacg
cccgaagaattaaaaacaaatagttatccattagaaggtagtaaacctggttatgcaata
tgtaccttaaactttgaactaaaatacaacgcacactatttgcatataaaaaaactaacg
gggaatcgtaggtactgcgttcgatgttctaaagaatacgaagtacatcctgttacatta
aaacaatacatagaaggacctgatacttgcagttaccatccggggaagaaaaaatcagga
ggtagaaattccgagaggatttataattgttgtaacagttcgtcgactgaaggatgtgca
tcacacgtgagacacgtgacggattgtaacgattatgataatcttccgaattgtgtgaaa
actctatcgaaagacgatttaaccgatccgggagttttcgcattggactgcgaaatggtt
tacacgagattaggttacgaattagcacgtgtaactgttgtcaatttaaaaaaagaaatc
gtgtatgatacgttagttaagccaaagtaccctatagaatgttacaatacattttactca
ggaatcgaagaaaaaatgatggagggagtaacgacaacattaaaagacgttcaagccgtt
cttctcagtatgttttcaaataaaacaatattaataggacattctcttgatagtgatcta
cgagcattgcatctaatacatgacacggttgtcgatactgccattttttacaaacacgaa
aaatttcacccatataagtattcactgagagaactttgcgctaggaaaatttcaaaaata
attcaagaaaatgttggtggccacgattctgccgaagatgcaatcgcagctttggaaatt
atgttgaatcacgtgaaagaagaagttagtaaatatgacagtttagaatcttacgaagcg
gacaaaattcaataa
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