Pediculus humanus corporis (human body louse): Phum_PHUM060160
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Entry
Phum_PHUM060160 CDS
T01223
Name
(RefSeq) Exosome complex exonuclease RRP44, putative
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Phum_PHUM060160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM060160
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
Phum_PHUM060160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Rrp44_CSD1
PIN_4
Rrp44_S1
OB_Dis3
OB_HELZ2
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
8230975
NCBI-ProteinID:
XP_002423448
UniProt:
E0VBF4
LinkDB
All DBs
AA seq
957 aa
AA seq
DB search
MLTNHIILKKTKRGSILKVVREHYLRDDLWCGSTLCGKCKQKPKDKVLEKSTESLSSLIK
ESHYVVLDSSVIIDQIDVLQENVICNAIILQTVINDLQNKNTVFYMKLKDIIANPSRHFC
VFVNENHKETYIAREQGEKINERNQRAIRVATKWYSNHLNNAVKIVLITDDVENKEKAIA
EGIPAFSSEEYVLSLNTSIPLADKLCQKDCEKENAGEPLYPCHYTPNEIHQGIKNKSLLY
GQFFAQRDNFLEGTVRVEGQELSVLVQGRKALNRAVDGDTVAVKLLPESQWVGSSDLVLK
DEDEEEDVEMINVDEDIIKDAGNEKGDKKPTGIIVGIIKRKWRQYCGILNKSLLENATRH
IFVPAERKIPKVRIITKQSEFLMSQKIVVVIDSWPRPIGDKETENEVLLLEHDVPHSKFS
EAVLSFLPELPWIITEDDLKNRVDLRHLDICSVDPPGCTDIDDALHCRKLDNGNFEVGIH
IADVTHFIKPGTALDKEAALRGTTVYLVDKRIDMVPELLSSNLCSLRENEDRFAFSCIVE
MTKKGKILNTKFHKSVIRSRKAMTYEEAQLKIDDKKQNDNVTQSLRWLNNLAKIIKKKRL
DNGALVLASPEVKFLMDSETHDPLDVEAKKIRDTNSMIEEFMLLANISVAEKIFKDFPEC
AVLRRHPKPPLSNFEPLIKAGRVQNFDISVDTGKSLSVSLEKAVKPNNPYFNTMLKILAT
RCMMQAVYFSSGMFKEEDFFHYGLACPIYTHFTSPIRRYADIIVHRLLAVSVNADSTYPE
LLDKRKTQELCNNLNYRNQMAQYAARASVALHTHLFFRDKVQDEEGYILRVRKNALQILI
PKYGLEGTLYVSGKKELDVIGFVYNDETQTQRCGDVIFKAFDPVTVQLSLDRSNVQREKL
FFRLVNPKVRKLLRLLFFFPKNICRVLLNKVQTTLYVRLLENVVGRGKGGRGRGRKR
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaaatcatatcatattaaaaaaaaccaaaaggggaagtatattaaaggttgtg
cgagagcattatttgagagatgacctttggtgtggttctacattatgtggcaaatgcaaa
caaaaacctaaggataaagttctggagaaatctacagaatctctcagttcattaattaaa
gaaagtcattatgttgtgttagattcaagtgttattattgatcagatagatgttttacaa
gaaaatgttatatgtaatgcaattatactacaaacagttataaatgatctccaaaataaa
aatacagttttttacatgaagttaaaagatataatagccaatcctagtaggcatttttgt
gtttttgttaatgaaaatcacaaagaaacatatattgcgagagaacaaggagagaaaata
aatgaaagaaatcaaagagcaatcagagtggctactaaatggtactctaatcatcttaac
aatgctgttaaaattgttttaataacagatgatgttgaaaataaagaaaaagccatagca
gaaggaattcctgctttttcatccgaagaatatgtattgagtttaaatacaagtattcca
ttagccgataaattgtgtcaaaaagattgtgaaaaagaaaatgcaggggaaccattgtat
ccctgccattacactccaaatgaaatacatcaaggaatcaaaaataaatccctactttat
ggccaattttttgcacagagagataattttttagaaggcactgttagagttgaagggcaa
gagttgtcagttttggttcaaggtagaaaagctcttaaccgagccgtcgacggagataca
gttgcagtaaaacttttaccagaaagccaatgggtaggatcaagtgatttagttttaaaa
gatgaagacgaagaggaagatgttgaaatgattaacgtagacgaagatataattaaagac
gcgggaaatgaaaagggtgataaaaaaccaacaggaataatcgtaggaatcataaaaaga
aaatggcgtcaatactgtggaatattaaataaaagcttactcgaaaatgcaaccaggcat
attttcgtaccggcagagcgtaaaattccaaaagttcgaataataacgaaacaatcggaa
tttttaatgagtcaaaaaattgttgtcgttatagattcttggccacgtccgatcggagat
aaggaaacagaaaacgaagttttactgttggaacacgatgtaccacacagtaaattttcc
gaagctgttttaagttttctaccagaattaccatggataattaccgaagacgatttgaaa
aaccgcgtggatttacgtcatttagatatttgttctgtcgaccctcctggatgtacggat
atcgatgacgccttgcactgtcggaaattggacaatggaaatttcgaagttggcattcac
attgcggatgtaacgcatttcataaaacctggaacggcactcgataaagaagccgctcta
agaggaacaaccgtttatctcgttgataaaaggatcgacatggttccagaattgctgagt
tcgaatttgtgttcgcttcgggaaaacgaagatcgttttgcattttcgtgcatcgtcgaa
atgacaaaaaaaggcaaaattctcaacacgaaatttcacaagagcgtcattcggtcgagg
aaagcgatgacgtacgaagaagctcaattgaaaatagatgataagaaacaaaatgataac
gttactcaatctctcagatggttaaacaatttggcgaaaataattaagaaaaaaaggctg
gacaacggagctttggttttggcatctcccgaagttaaatttctcatggacagcgaaact
cacgatcccttggacgtggaagcaaaaaaaattcgcgacacgaattcgatgattgaagaa
ttcatgcttttggcaaatatttccgttgctgagaaaatttttaaagattttccggaatgt
gccgttcttaggagacatccgaaacctccgctgtctaattttgaacctctgataaaagcc
ggtcgcgttcagaatttcgacatatccgtggacacggggaaaagcctgtcggtgagtttg
gaaaaagcagtcaaacctaacaatccttattttaacacaatgttaaaaatcctcgcgaca
agatgtatgatgcaagccgtttatttttcatccggaatgttcaaagaagaagacttcttt
cactatggtttagcttgtccgatatacactcattttacgtcgccgataaggaggtacgcg
gatataattgttcatcgattgttggcagtttcggtgaatgcggattcaacgtatcctgaa
cttttagacaagagaaaaacgcaagaattgtgtaataatttgaattataggaatcaaatg
gctcaatacgcggccagagcttctgtcgcgcttcacactcaccttttctttcgcgataaa
gttcaagacgaagaaggttacattttgagggtcaggaaaaacgctctgcagattttgata
ccgaaatacggtttggagggtaccctgtacgtgagtgggaaaaaagaattggacgtcata
ggtttcgtttacaacgacgagacacaaactcaaaggtgcggtgacgtcattttcaaagcg
ttcgatccggtaaccgttcaattatcattggatagaagtaacgttcaacgtgaaaaatta
tttttccggttggtaaatcctaaggtacgtaaattgttaaggttattgtttttctttcca
aaaaacatttgccgcgttttactgaacaaggtacaaaccacactatacgttcgattactg
gaaaatgtggtggggaggggaaaagggggaagaggaaggggaaggaaaaggtag
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