Pediculus humanus corporis (human body louse): Phum_PHUM116870
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Entry
Phum_PHUM116870 CDS
T01223
Name
(RefSeq) THO complex subunit, putative
KO
K12879
THO complex subunit 2
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03013
Nucleocytoplasmic transport
phu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Phum_PHUM116870
09122 Translation
03013 Nucleocytoplasmic transport
Phum_PHUM116870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM116870
03041 Spliceosome [BR:
phu03041
]
Phum_PHUM116870
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
Phum_PHUM116870
Spliceosome [BR:
phu03041
]
Complex C
Other components
EJC/TREX
Phum_PHUM116870
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
Phum_PHUM116870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
DUF2124
Motif
Other DBs
NCBI-GeneID:
8238305
NCBI-ProteinID:
XP_002424181
UniProt:
E0VDI7
LinkDB
All DBs
AA seq
1370 aa
AA seq
DB search
MAATSCLDMSPEVWKNWEKHGKSEFLKLLKASLVEYTGPQRELKPAKYIYELLSSGVNGL
VKKENVIATIGEILSFHMDVPSLILDILNILDLETLCSSIRDERNNFCTIVRECEKVIPE
KLLKERLEIDTLQDVGMLKNRNFYTKFIRIKTKLYYKQKKFNLLREESEGYAKLITQLNQ
DISVNFTAENLLQDTKSLIGCFNLDPNRVLDIILEAFELRTELAEIFMELLKSYTNDSKV
LCEILGFKFSHYYKNKEPTPQNLYKITALLLQYEIIQLDDIYPWLMPLDSVIEKEWENEM
KEAKEYARKQNVISTKEKENEESECEKESAQEKYAMIQKFGLCEALLTIGAWSVCQELCR
NLPEHCIMEQPPVAKAMCNLLHSLIEPLYSANCCISNKVQRRPPPVLNSKLTPKSVLTFS
EMRNDVIPMLIALGPSLHFDSVLMYKIIRLCKVNLYQLGEEGLKQPSGEDSLYHDIIVLL
DLVILPSLSYMDCNCSIAEEVWNVIKNFPYQIRYCLYSRWKNETPNEHAKLLRKNGEALK
NIKNIMKRVSKENIKPVGRLIGKLTHASPGVLFDYVLIQIQMYENLIGPVVDSLKFLTNL
SYDVLGYCLVETLANTSLDKERFKYDGTSISMWLQSLSSFCGFAFKKYNIELTGLLQYVA
NQLKAEKSLDLLILREIVQKMAGIEAAEEMTTDQLNAMCGGELLKGEAGYFSQVRNTKKS
SLRLKEALNEQDLGVSLCLLMAQQRYCVIYRETDKSHLKLVGKLYDQCQDTLVQFGTFLC
STLSVDEYDTRFPSIHSMLSEYHINADVAFFLARPTLNHAINMKYDTLRKSDANYKKLSL
QSKQQKYCEAVQEIMTPIIKSVRSLHSNKVWEDISPQFLVTFWSLTMYDLQVPVESYQKE
INRIKQSSILGIDSKEMATSKGKKEQERFNALMEKLQDERKKQQEHVEKVMARLKQEKDS
WFPTKSLRSPKNESIMKFLQLCIFPRCIFTSLDALYCFKFIYTIHMLKTANFSTLLCLDK
LLCDLTYTVTFCTENEAHRYGRFLCCVLELVMRWHGDVNIFEAECSNHPGFVTKYRASNH
FSDASDEVSYENYRHVCHKWHYKITKAILVCLESKDYTQIRNSLIVLIKILPHFPMLAKL
AQIIEKAIEKVQQEEKNQRQDLYILAMSYGGHLKAKAPNMVKDSDFHQVVSKVSNKQGKE
KLSKENSIEKVEKSEKREKLSNKSENKENNKSRTGRKELSETKKETTPPYNNNNKEKTER
EELKEEMRLQKEEKSRNKDRKEDKHSKDERTYRDDRYVESIPLSKDEQRHMTGYYSGAGH
YMDETRDISSLSNSSSGSHKHGGENVEPERDVKRRKMDGSSSSKVSIPVS
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atggcggctacttcatgtttggatatgtcgccagaggtgtggaaaaactgggaaaaacat
gggaaatctgaatttttaaaattattgaaagcttctctagtggaatacacaggtcctcaa
agggaactaaaaccagctaaatacatttatgaattattgtcatcaggagtgaatggttta
gttaaaaaagaaaatgttattgcaactattggagaaatattatcttttcacatggacgtc
cctagtttaatattagatattttaaatatattagatttagaaactttgtgctcaagcatt
agggatgaaagaaataacttttgtacaattgttcgagaatgtgaaaaagtcataccagaa
aaattgttaaaagaaagattggagattgataccttacaggatgtaggaatgttaaaaaat
agaaatttttatactaaatttattagaattaaaaccaaattatactataagcaaaagaaa
tttaatttgcttagagaagaaagtgaaggctatgcaaaattaataacacaattaaatcag
gatatttcagtaaattttactgcagaaaacctactgcaagatactaaatcattaattggt
tgctttaatttagatcccaatcgagtgcttgacataattttagaagcttttgaacttagg
acagaattagctgaaatatttatggaactgttaaaatcctacacaaatgactcgaaagtt
ctttgtgaaattctaggatttaaattttcacactattataaaaataaagagccaactcct
caaaatttatataaaattactgcacttttattgcagtatgaaattattcagttggatgat
atctatccctggttaatgcccttagatagtgtgattgaaaaagaatgggaaaatgaaatg
aaagaagcaaaggagtatgctagaaagcaaaatgttatatctactaaagagaaagaaaat
gaagaatctgaatgtgaaaaagaatctgctcaggaaaagtatgcaatgattcaaaaattt
ggtctttgtgaggctttattaacaattggggcatggtccgtatgccaagaactttgtcgt
aatcttcctgaacactgcatcatggagcaaccacccgttgcaaaagccatgtgcaacctt
cttcattcactaatagaaccgttatactcagcaaattgttgtatttcaaataaagttcaa
agacgtcctcctcctgttttgaacagtaaactaacgcccaagtctgttttaacgttttct
gaaatgagaaatgatgttattcctatgctaatcgctctgggaccttcgttacattttgat
tcagttcttatgtacaaaataattcgtctatgtaaagttaatttatatcaacttggcgaa
gagggactaaagcaaccttcaggagaagattctctttatcatgacattatagttcttttg
gatttagtgattctaccgtctttgtcttacatggattgtaattgtagcattgcagaagaa
gtatggaacgtcataaaaaactttccctatcaaatcagatattgtttgtacagtcggtgg
aaaaacgaaactccaaatgaacacgcaaagcttttacgaaagaacggagaagcattgaaa
aatataaaaaatataatgaaaagagtaagcaaggaaaatataaaaccagttggcaggctc
atcggaaaactgactcacgcttctcctggggttttatttgattatgtgttaatacaaatt
caaatgtatgaaaatttgataggaccagttgttgattcactcaagtttttaactaattta
tcgtacgacgtattaggctactgtttagtagagactttagcgaatacttcgttagacaaa
gaaagatttaaatatgatggaacatcaatatcaatgtggcttcaaagtttgtcttcgttt
tgtggtttcgcgtttaagaaatataatatagaattaactggattattacaatacgttgca
aatcagctgaaggctgaaaaaagcttagatttattaatattacgagaaatagttcaaaag
atggctggcatagaagcagccgaagaaatgacaactgaccaactcaatgccatgtgcggt
ggagaacttttaaaaggtgaagctggttactttagtcaagttcgaaacactaaaaaatct
tcattaaggctaaaagaagctttaaatgaacaagatttgggggtttcactgtgtctctta
atggcacaacaaagatactgtgtaatatatagagaaacggataaaagccatttgaaacta
gtcggaaaactgtatgatcagtgtcaagatacattggttcagtttggtacctttttgtgt
tctactctctccgtggatgaatatgatactcgttttccttcaattcattccatgttatca
gaataccatataaatgccgacgtcgcattttttttagcaagacctacattaaatcatgct
ataaatatgaagtacgacactttaagaaaaagtgatgcaaattataaaaaattgagttta
caatcaaagcaacaaaaatactgtgaagccgttcaagaaataatgactcccataataaaa
tcagttagatccctacattcaaataaagtttgggaagatatcagtcctcaatttcttgtt
accttttggagtttgacaatgtatgatcttcaagttcctgttgagagttatcaaaaagaa
atcaacagaattaaacaatcatcaattttgggtattgattctaaagaaatggctactagt
aaaggtaaaaaagaacaagaaagatttaacgctttaatggaaaaacttcaagatgaaagg
aaaaaacaacaagagcacgttgaaaaagtcatggcgagattaaaacaagaaaaagattcg
tggtttcctacaaaatctttgagatcacccaaaaatgaatcgataatgaaatttttacaa
ttgtgtatttttcccagatgtatttttacctccttagacgcgttgtactgttttaaattt
atttacactattcatatgttaaagacggccaatttttcaactcttttgtgtttagacaaa
ttattgtgtgatctaacatatacagttacattttgcactgaaaacgaggctcaccgttac
ggaagatttttatgttgcgttttagaattagtaatgagatggcatggtgatgttaatata
ttcgaagccgaatgttcgaatcatcctggttttgtaactaaatacagagcaagcaatcat
ttttcggatgccagtgatgaagtatcatatgaaaattatcgtcacgtgtgtcacaaatgg
cattataaaataaccaaagcgatacttgtttgtttagaatcaaaagattatacacaaatt
cgtaattcattaatagttcttattaaaatattaccacattttccaatgttagcaaaatta
gctcaaataattgagaaagcgattgaaaaagtacaacaagaagaaaaaaatcaaaggcaa
gatttatatattttagcaatgagttatggcggtcatttaaaagcaaaagctcctaatatg
gtcaaagatagcgattttcatcaggtcgtcagtaaagtgtcgaataaacaaggaaaagaa
aaattaagtaaagaaaattcaatagaaaaagttgaaaaaagtgaaaaaagggaaaaatta
agtaataaatcggaaaataaagaaaataataaatcgagaactggacgaaaagaattaagt
gaaactaaaaaagaaaccacacctccttacaataataataataaagaaaagacagaaagg
gaagaattaaaagaagaaatgaggttgcaaaaagaggaaaaatcacgaaacaaggatcga
aaagaggataaacattcaaaagacgaaagaacttatagggacgatagatacgttgaatca
ataccgttaagtaaagatgaacaaagacacatgactggttattatagtggtgctgggcat
tatatggatgaaacaagagatattagcagtttatcgaatagcagttcggggtcacataag
cacggtggagagaacgtagaacctgaacgtgatgtgaaacgtaggaaaatggatggaagt
tcatcctccaaggttagtattccagtatcgtaa
DBGET
integrated database retrieval system
