Pediculus humanus corporis (human body louse): Phum_PHUM136040
Help
Entry
Phum_PHUM136040 CDS
T01223
Name
(RefSeq) collagen alpha-1, IV, chain precursor, putative
KO
K06237
collagen type IV alpha
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu04512
ECM-receptor interaction
phu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
Phum_PHUM136040
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
Phum_PHUM136040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phu04147
]
Phum_PHUM136040
00536 Glycosaminoglycan binding proteins [BR:
phu00536
]
Phum_PHUM136040
Exosome [BR:
phu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
Phum_PHUM136040
Glycosaminoglycan binding proteins [BR:
phu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
Phum_PHUM136040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
8234229
NCBI-ProteinID:
XP_002424552
UniProt:
E0VEK8
LinkDB
All DBs
AA seq
1787 aa
AA seq
DB search
MTKEIKIFNSRGDWGVSTYHHPGSPQCDCDGLKGYPGEAGVPGVHGPEGPSGDIGPEGPV
GPKGEKGEYGEFGAVGEKGDRGDPGVQGDNGTQGYDGKMGEKGVDGLPGLDGCKGVDGLS
GVPGVPGIPGGRGGVGEDGERGPPGEAGEGGANTQGTKGERGDDAADGTPGFPGYPGLRG
PPGHRGPAGDRGRPGYPGPPGPPGDKAEPVKGSPGLKGDRGELGEPGPPGKLTYTNESEL
VQEPGFSTYKGQKGMRGSPGEPGPRGAKGERGNKGQKGYSGFPGMKGIKGNQGPDGERGK
QGREGPPGAPGEKGDKGAPGTAGLPGADGMKGDRGEPGFSGAPGPQGPEGPPGIYDPDLD
EEVEGITGPQGPMGFPGEKGADGVPGQHGLAGHIGPPGEPGPPGAAGPAGPRGTSIKGEQ
GADGNQGSQGPIGLSGPEGPEGEKGLPGYTITGPPGEDGRGGRDGFPGVVGDRGDTGEPG
AKGFPGRGVAIVGPPGEPGPPGFPGIPGLPGLPGYGGQKGMQGERGEDCGVCQPGRKGEK
GDRGDAARDGSPGGPGFPGFPGIRGPKGQPGMPGRPGYPGLDGIPGSTGLAGTPGPKGEA
GSIIYPPDSMTLGHTGDPGLPGFPGEQGPWGPMGPPGPAGERGLRGRKGVKGTMGAPGSQ
GRDGRAGGDGQAGPKGDSAFVPKEFLRGDPGIDGYRGLRGDIGEPGLVGLPGDAGEWVLD
IQGDKGYKGQPGDYGLPGRKGEPGPAGDQGFPGPQGPQGSQGISAQGEIGLKGYPGITGE
QGLRGEPGKPGLAGKMGLPGFGGQKGARGERGQSILDGPFGLQGPKGQPGDVGDEGFAGP
PGTAGVTGQKGIKGMKGAAGYVGLHGLRGERGQQGAIVQGPPGFPGSPGFNGAKGQQGDE
GYPGEDGFPGILGEKGTKGDIGNQGRVGEPGDAGAPGLPGLDGRMGSPGVFGEQGDRGDV
GIPGVPGVKGRMGMPGTPGLKGSTGDPGNFGGMGFRGPPGYPGLPGDPGLPGLDGLPGDS
SFSGPKGEPGDPGVDGQPGIPGPRGLDGLKGERGDEGFIIFGGAGQPGEGGRAGFPGVVG
RPGPKGERGDPGIPGEKGEQGDIGNVGFVGNRGRDGAFGLRGVPGLPGSDGRVGEKGVQG
DEGDPGVIGRPGMPGDLGPEGPRGLPGYPGAKGAMGDPGRNIYTPGTKGSPGENGLHGMK
GMPGRPGPPGLMGLPGFKGDVGEAGYPGEAGFPGARGEMGQKGDQGNPGLPGISAAFADR
GDPGTPGLDGIAGRPGVPGQKGAPGNYGVDGLPGLPGPSIPGAPGPKGFPGSAGRPGLAG
APGLQGMKGDAGRPGYRGAKGMRGAPGTTPISLKGMKGQKGFPGFPGLNGAKGFQGDAGF
PGVPGVPGLKGEKGDFGEPGLPGRAGLQGPKGMKGDWGETPIVAYELLKGQMGEKGFPGT
VGLPGQPGIMGNPGRDGLPGLVGDSGIDGYNGLMGPSGPKGQPGLPGRPGFPGAIGRKGI
AGIRGDPAPVGYPPRRRGFFFTVHSQTDEVPPCPQDTTVLWDGYSLLHFMGNAKSHGQDL
GAPGSCLRKFSTMPFMPCNLNNVCEYSSRNDYSYWLSTSEPMPMMMTPIQPPDLKKYISR
CAVCEAPTRVIAVHSQSNDIPNCPNGWENLWIGYSFLMHTASGADGSGQSLISPGSCLLE
FRPTPFIECHGVGRCNYFSNSYSYWLSTLNERDMFSKPRQQTLKAGLLETRISRCSVCMR
TNDFNRRRQNFSAAEYYQRRASRNTKTKLLKRKSKNPRRIDLFKALI
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagaaataaaaatatttaattctcgaggagattggggcgtttcaacgtatcat
catcccggttctcctcaatgcgactgtgacggattaaaaggttatccaggtgaagccgga
gttccaggagtacacggtcctgaaggaccgtcgggtgacattggacccgagggtcctgta
ggtccaaaaggagaaaagggagaatatggtgaatttggagctgtgggagaaaagggagac
aggggcgaccctggagtccaaggagacaatggaacacaaggatacgacggcaaaatggga
gaaaaaggagttgacggtcttccaggtttagacggttgtaaaggagtagatgggctttca
ggtgtaccaggagtccctggaattcccggtggaagaggaggagttggagaagatggagag
cgaggaccaccaggggaagctggagaaggaggtgccaacactcaaggaacaaaaggtgaa
agaggagatgatgctgctgacggtacaccaggttttccaggttaccccggattaagagga
ccccccggtcaccgtggtcccgccggagatagaggcagaccaggatatcctggacctccc
ggaccacccggagacaaagccgaaccggtaaaaggatcacctggtttaaaaggagatcgc
ggagaacttggagaacctggtcctcctggaaaattaacctatactaatgaatcggaactg
gttcaagaacccggattttctacatataaagggcaaaaaggaatgaggggatctccagga
gaaccgggtccaagaggagcaaaaggagaacgtggaaacaagggccaaaagggatactcc
ggatttccaggaatgaagggtattaaaggaaatcaaggaccggatggtgaaagaggaaaa
caaggaagagaaggtccacctggtgcaccaggtgaaaaaggagacaaaggagctcctgga
acggcaggtttaccaggagcggacggaatgaaaggagatcgaggggagccgggattttct
ggagctcctgggcctcagggtcccgaagggcctccaggaatttacgatcctgatttagac
gaagaagtggaaggaataacggggcctcaaggaccgatgggttttcccggagagaaagga
gccgatggtgtgccgggacaacatggacttgcaggtcacatcggaccacccggtgaaccc
ggacctccgggtgccgcaggaccggccggaccgaggggaacatctatcaagggagaacaa
ggagccgatggcaatcaaggatctcaaggtccgatcggtttgtcgggaccggaaggacca
gaaggagaaaaaggtcttccaggttacacgataacaggtccacccggcgaagacggacga
ggtggtcgagacggttttccgggagtggtgggagatcgtggagacacgggtgaaccggga
gccaaaggttttcccggacgaggagtggcaatagtgggtccccctggagaaccgggtccg
ccaggattccccggtattccaggattaccgggacttcctggatacggaggacaaaaggga
atgcaaggagaaaggggtgaagattgcggcgtttgtcaaccaggtagaaaaggagaaaag
ggagatcgaggtgacgctgctagagacggaagtcctggaggccccggttttcccggattt
ccaggaattagaggacccaaaggtcagcctggaatgccaggaagaccaggttatccaggt
ttagatggaatcccgggtagtacaggtttggccggaactcccggacccaaaggtgaagcg
ggatctattatttatcctccggacagcatgactttaggacatacgggtgacccaggtttg
ccaggtttcccaggagaacaagggccttggggtcctatgggacctccaggaccagctgga
gaacggggtttaagaggaaggaaaggtgtaaaaggtaccatgggagctccaggtagtcaa
ggtcgagacgggcgagcaggaggtgatggtcaagccggtcctaaaggagactctgctttt
gttcctaaggaattcttgagaggcgatcctggaatagatggatatagaggtcttcgagga
gacattggagagccaggtttggttggtttaccaggagatgctggagaatgggtattagat
attcaaggagataaaggttacaaaggtcagccaggagattacggtttaccaggccgaaaa
ggtgaacctggtccagcaggagatcaaggattcccgggacctcaaggtcctcagggttcc
caaggtatttctgcccaaggtgaaattggattaaaagggtatcctggaatcaccggagaa
cagggactaaggggcgagcctggtaaacccggattagctggcaaaatgggtctgcccgga
tttggtgggcaaaaaggagcacgaggtgaaagaggacaaagcattcttgatggtcctttt
ggtcttcaaggccccaaaggacagccaggggatgttggagatgaaggatttgctggaccc
ccgggaacagccggtgtcactggacaaaaaggaattaaaggaatgaaaggagcagcagga
tacgttggcttacatggattaagaggagaaagaggacaacagggagccatcgttcaagga
cctcctggttttcctggtagtcctggatttaacggcgctaaagggcaacagggagatgaa
ggttaccccggtgaagacggattccccggtattcttggagaaaaaggaacaaagggagac
attggaaaccaaggaagagttggtgagcccggagacgctggagcacctggtttgcccgga
ttagatggaagaatgggaagtccgggtgtttttggtgaacaaggagatcggggagatgta
ggaatacctggagttccaggtgtaaaaggaagaatgggtatgccgggtacaccaggatta
aagggcagtactggagacccgggaaatttcggaggcatgggatttcgcggacctcctgga
tatccggggctgcctggagatccaggattacccggactggacggtttgccaggggattct
agttttagcggtcctaaaggagaaccaggagatccaggagttgatgggcaaccgggaatt
ccgggtcctagaggtttggatggtttaaagggagaaaggggagatgaaggttttatcatt
ttcgggggtgcaggtcagcctggtgagggaggaagagctggattccccggtgttgtaggt
cgtccgggaccaaagggagaaagaggagatcctggcataccaggtgaaaaaggtgaacag
ggagatataggaaatgttggttttgtcggaaatagaggccgagatggagcttttggacta
cgaggagttcctggattaccaggaagtgatggtagagtaggtgaaaaaggtgttcaaggc
gacgaaggtgatccaggagttatcggtagaccaggaatgcctggagacctcggaccggaa
ggacctcggggattgcccggttatcctggggctaaaggagccatgggagatccaggaaga
aacatttacactcctggaactaaaggaagtcccggagaaaatggtttgcatggtatgaag
ggcatgcctggaagacctggaccgccgggtttgatgggcttacccggctttaagggagat
gttggtgaagcaggatacccaggagaagcaggttttcctggtgcgcgcggagaaatggga
caaaaaggagatcaaggaaatcctggtttgcccggtatttctgcagcgtttgccgaccgt
ggagatcccggaactccaggattggatggaattgcgggtagacctggcgtacctggtcaa
aaaggcgctcctggaaactacggagtcgacgggttgcctggattaccaggtccaagcatt
cctggagcaccaggtccaaaaggttttcctggctcggcaggtagacctggattagcagga
gctccaggattgcaaggaatgaaaggagatgcaggaagaccaggatatcgtggagcaaaa
ggaatgagaggtgctccaggaactacaccaataagtttaaaaggtatgaaaggtcaaaag
ggattcccgggtttcccaggcttaaatggagctaaaggtttccaaggagatgctggattc
cccggagttccaggagtacctgggttaaaaggagaaaaaggagactttggagaacctggt
ctgcctggacgtgctggacttcaaggccccaagggaatgaaaggagattggggtgaaaca
ccaattgtggcttacgaattattgaaaggacaaatgggagaaaaaggatttcctggcaca
gtgggtctaccagggcaacctggaatcatgggtaatcctggaagagacggactaccgggt
ttagtcggagacagtggaattgatggttacaacggtttgatgggaccttcaggacccaaa
ggtcaaccaggtttgccaggaagacctggctttccaggagctatcggcagaaaaggtatt
gccggtattagaggagatccggctccggtcggttatcctccaagaagaagaggatttttc
ttcacggttcactctcaaacagatgaagtgcctccttgccctcaagacaccacggtgctt
tgggacggctattcccttcttcattttatgggtaatgcaaaatcacacggtcaagatttg
ggagcgcctggaagttgccttcgtaaattttcaaccatgccatttatgccgtgcaatttg
aacaatgtgtgtgaatattcgtcaagaaatgattacagttattggcttagtacatctgag
cccatgccaatgatgatgacacctattcaaccaccagatttgaaaaaatatatttctaga
tgtgccgtttgtgaagctccaacgagagtaatagcagttcacagtcaatcaaatgatata
ccaaactgtccaaacggttgggaaaatctttggatcggttacagtttcttgatgcacacg
gcttccggtgctgacggtagtggtcaatctctaatatctccaggatcatgcttgctcgaa
tttcgtcctacacctttcattgagtgtcatggcgttggtcggtgtaactacttttcaaat
tcttattcgtactggctttcaactctaaacgaacgtgatatgttcagtaaaccacgtcag
caaactcttaaagctggcctattagaaacccgcataagtagatgttcagtttgtatgaga
acaaatgatttcaatagaagaagacaaaatttttcagccgctgaatattatcaaagaaga
gcatcaagaaacactaaaaccaaattattaaagagaaaaagtaaaaatccaaggagaatt
gatcttttcaaggctttaatatag
DBGET
integrated database retrieval system
