Pediculus humanus corporis (human body louse): Phum_PHUM136930
Help
Entry
Phum_PHUM136930 CDS
T01223
Name
(RefSeq) ATP-dependent RNA helicase WM6, putative
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03013
Nucleocytoplasmic transport
phu03015
mRNA surveillance pathway
phu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Phum_PHUM136930
09122 Translation
03013 Nucleocytoplasmic transport
Phum_PHUM136930
03015 mRNA surveillance pathway
Phum_PHUM136930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM136930
03041 Spliceosome [BR:
phu03041
]
Phum_PHUM136930
Enzymes [BR:
phu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Phum_PHUM136930
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
Phum_PHUM136930
Spliceosome [BR:
phu03041
]
Complex C
Other components
EJC/TREX
Phum_PHUM136930
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
Phum_PHUM136930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
Cas3-like_C_2
DEAD
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
8234258
NCBI-ProteinID:
XP_002424581
UniProt:
E0VEN7
LinkDB
All DBs
AA seq
315 aa
AA seq
DB search
MADHEDLLDYEDEEQTEPVVEGSIDGAGKEKVKGTYVSIHSSAFKDFLLKPEIVRSIMDC
GFEHPSEVQHECIPQAILGMDILYMRRDVQEIFRNTPHAKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVNDEAKLTLHGLQQHYVKLKENEKNKKLFELLDILEFNQVVIFVKSVQRCMA
LAQLLTEQNFPAIAIHRGMVQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITFVSEEADAKILNEVQERFDVNITELPDEIDLSS
YTMMFWYSSHEQNDY
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcatgaagacctattggattatgaagatgaagaacaaactgaacctgtagtc
gaaggatcaatcgatggagccgggaaagaaaaagttaaaggaacatatgtttcaattcac
agttccgcttttaaagattttttacttaagccagaaattgttagatcaattatggattgt
ggatttgaacatccatctgaagttcaacacgaatgcattccacaagctatattgggtatg
gatattctatatatgaggcgtgatgtgcaagagatatttagaaacactcctcacgcgaag
caagtcatgatgtttagtgctacattgagcaaggaaattcgacctgtctgcaaaaaattt
atgcaagatcctatggaagtttacgtcaacgacgaagctaagctgacacttcacggtctt
caacaacactacgtaaaattaaaggaaaatgaaaaaaataaaaaactatttgaattatta
gatattctggaattcaatcaggttgttatatttgtaaaatcagttcaaagatgcatggca
ttggcacaattgctcacagagcaaaattttccagcaattgctattcataggggaatggtt
caagaagaaagactatcacgatatcagcaatttaaagattttcaaaagagaattttagtg
gctactaatttatttggaagaggtatggacatagaacgtgttaatatagtatttaactac
gacatgccagaagattctgatacttatttgcatcgggttgcaagagcaggtcgtttcgga
accaagggattagcaataacttttgtgagcgaagaggctgatgctaaaattttgaatgaa
gtacaagaacgttttgatgtcaacataacggaattgccagacgaaattgatctttcttct
tatactatgatgttttggtatagttcacatgaacaaaatgattattaa
DBGET
integrated database retrieval system
