Pediculus humanus corporis (human body louse): Phum_PHUM159220
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Entry
Phum_PHUM159220 CDS
T01223
Name
(RefSeq) hypothetical protein
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Phum_PHUM159220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM159220
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Phum_PHUM159220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_14
ARM_TT21
TPR_19
Motif
Other DBs
NCBI-GeneID:
8236546
NCBI-ProteinID:
XP_002424894
UniProt:
E0VFK0
LinkDB
All DBs
AA seq
667 aa
AA seq
DB search
MASKEVVKSKSHGSSALVVSDQEQDLAQSALSDFTKGNYSACLTSLAKLEATWTHDSKVA
HNKAVAEYYKSSLKKTDQFRKNLANLRSQPIWNGDDVVRLDDVEQCFLYYNHAVLLFHLK
QYNLALKVIKEVFTFIEPMEESLAHKVCLLLVELLLCMRQVDTALDYISYITSQFASTKN
IQVLEKEPAEKKPIVFDAATDAFRLKLLQCQTRCYLMNKCLKGSKKELKTIMTTGGNNVA
SVFLKANLEYLKKNYTKSIKVLNSILNHTLPNFKDTGESVNILYYNNMACIHHYLRKPNL
ACFYLQKAIKENEEAIKSFPKPEIPEELSNRPLYTLSSNKLTELMYNLGVALLYAGKPSQ
AFDCLTEAVQVYHMNPRLWLRMAECCIMAHKSNNEEDFNIHVKKNDLVQNVIGSGQHRKL
VIANKLSKDIHYTNEYQSYAIPAPTLEFAFLCVRNALHLLPTNEKGEIHSGRTTPIQEPT
AASLENAFYGAPSNPIGETEVKNLRCSVLAAAAYVTLCLGDHIIALDYAQELLQQKPLSG
VHKMLGHLYAAEACIFIDKISEALEHLNPELITDLSVGLPVPVEDCVEESSKPLKEWYPN
NLLTAKALMQYHLAVAFAIRGQYEKSGETLKHVWMLKGNCDIPIQVIMLALYIELQLGLS
LNSIVLI
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaagaagtagttaaaagcaaaagtcatggtagttcagctttagtagtttct
gatcaagaacaagatttggctcaatcagctttatcagattttacaaaaggcaattattca
gcttgcttaacaagcttggcaaaactagaagcaacttggactcatgattctaaagtagct
cacaataaagctgttgcagaatattataaatctagtttaaaaaaaaccgatcaatttaga
aaaaatttagcaaacttaagatctcaacctatatggaatggtgacgatgttgttagactt
gatgatgtagagcagtgttttttatattataatcatgctgtgttattatttcaccttaaa
caatacaatcttgctttaaaagtaataaaagaagttttcacatttatcgaaccaatggag
gaaagtttagctcacaaagtgtgtttactgctagtagaattattattatgtatgaggcaa
gttgatactgctttagattatatcagttacattactagtcaatttgcatcaactaaaaat
attcaggtgcttgagaaggaacctgccgagaaaaaacctatagttttcgatgcagcaact
gatgcttttaggctaaagttattacaatgtcaaactaggtgttatctaatgaataaatgt
ttaaaaggaagtaaaaaggaactgaaaactataatgacaacaggtggcaataatgtagct
tcagtatttttaaaggctaatctagagtatttaaaaaaaaattatacgaaatccattaag
gtattaaattcaatattaaatcacactttacccaattttaaggacactggggaatcggtt
aacatattgtattacaacaatatggcttgtattcatcattatttaagaaagccaaactta
gcttgtttttatttgcaaaaagccattaaagaaaatgaagaagctataaaaagtttccct
aaacctgaaatcccagaggaattatcaaataggcctttatatactcttagttctaataaa
ttaactgaattaatgtataatttaggagtagctttgttgtacgctgggaaaccttctcaa
gcttttgattgtttaacagaggctgttcaagtttatcatatgaaccctagactgtggctt
agaatggctgaatgctgcataatggcacataaatctaataatgaagaagattttaatatt
cacgtgaaaaaaaatgatttagttcaaaatgtaattggaagcggtcagcataggaaatta
gttatcgccaataaattatctaaagatatccattacacaaatgagtatcaatcgtacgcc
ataccagctccaactttagaatttgcttttttgtgtgttagaaatgctttgcatttattg
ccaactaatgaaaaaggagaaattcacagcggtcgaacaacacccattcaagagcctaca
gcagcaagtttagaaaatgctttttatggagcgccttcaaaccccattggtgaaacagaa
gtgaaaaatttaagatgttcagtacttgcggcggctgcttatgtaactctttgtttaggt
gatcatataatagctttagattatgcccaagaacttttacaacaaaaaccattatctgga
gttcacaaaatgttaggtcacttatatgcagctgaagcctgtatatttatcgataaaata
tcagaagctctggagcatttaaatccggaattaataaccgatttgagtgttggtctgcct
gtacctgttgaggattgcgtagaagaaagttcaaaaccattgaaagagtggtatccaaat
aatttattgactgccaaagctttaatgcagtatcatttggctgtggcttttgcaattaga
ggtcaatatgaaaaatcaggagaaacgttaaagcatgtctggatgttgaaaggaaactgt
gacattcccatacaagttattatgctagcattatacattgaattgcaactaggactatca
ttaaacagcattgtcctcatttga
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