Pediculus humanus corporis (human body louse): Phum_PHUM217130
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Entry
Phum_PHUM217130 CDS
T01223
Name
(RefSeq) snf5, putative
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03082
ATP-dependent chromatin remodeling
phu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Phum_PHUM217130
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Phum_PHUM217130
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phu01009
]
Phum_PHUM217130
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phu03021
]
Phum_PHUM217130
03036 Chromosome and associated proteins [BR:
phu03036
]
Phum_PHUM217130
Protein phosphatases and associated proteins [BR:
phu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
Phum_PHUM217130
Transcription machinery [BR:
phu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
Phum_PHUM217130
SWI/SNF complex
Phum_PHUM217130
Chromosome and associated proteins [BR:
phu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
Phum_PHUM217130
PBAF complex
Phum_PHUM217130
SWI/SNF complex
Phum_PHUM217130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
8237617
NCBI-ProteinID:
XP_002425734
UniProt:
E0VHZ0
LinkDB
All DBs
AA seq
366 aa
AA seq
DB search
MALKTYGDKPVSFQIEENGEYYCIGSEVGNYLRLFRGSLYKRYPGLYRRNLTVDERKRVL
DLGVSNHCLASSVSLLRASEVEDIIDGNDEKYKAVSIHTTEIVMPASSKSKKSMPWVPNL
PNSSHLDAVPQATPINRNRVQNKKVRTFPLCFDDSDPNIVHENASQTEVLVPIRLDMEIE
GQKLRDTFTWNKNETLITPEQFAEVLCDDLDLNPIAFVPAIAQAIRQQLDAFPTDNILSE
QFDQRVIVKLNIHVGNTSLVDQVEWDMSEKENSPEMFAQKLCAELGLGGEFVTAIAYSIR
GQITWHQRTYAFSEAPLPVVEVPYRPPSESDQWAPFLETLTDAEMEKKIRDQDRNTRREH
EIFSRV
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaaaacttacggagataaacccgtaagttttcaaattgaagaaaatggagag
tattattgcattggaagcgaggtgggaaattatttaagattatttcgcggttccttatac
aaaagatatccaggactttacagaaggaatttgacagtggacgaaagaaaaagagtttta
gatttaggagtcagtaatcattgtttagcatccagcgtttctctactcagagcttctgaa
gtcgaagatataattgatggtaatgatgaaaaatacaaagcagtttcaattcacactaca
gaaattgttatgccagcatcgagtaaatctaaaaaatcaatgccttgggttcccaatctt
ccgaatagttcacatttagatgcagtaccacaggcaacaccgataaatagaaacagagtt
caaaataaaaaagttcgaacatttccattatgtttcgatgattctgatccgaatattgtt
catgagaatgcatctcaaacagaagtactcgttccgattagattagatatggaaattgag
ggtcaaaaattacgagatacattcacatggaataaaaatgaaactttgataactccagaa
caatttgcagaagttttatgtgacgatttagatttaaatcctattgcatttgttcctgcc
attgcgcaagctatacgacaacaattggatgcatttccgacagataatattttgtctgaa
caatttgatcaaagagttatcgtcaagttaaacattcacgttggtaacacttcattagtt
gatcaagtcgaatgggacatgtccgagaaagaaaattctcccgagatgttcgcacaaaaa
ttatgtgctgaattaggtttgggtggtgaattcgtgaccgcgattgcgtacagcataagg
ggtcaaataacgtggcatcagagaacttatgctttcagcgaagctccgcttccggtcgtt
gaagtaccgtatcggccgccgagcgaatccgatcagtgggcaccgtttttggaaactttg
acggatgcggaaatggaaaagaaaattcgagatcaagatagaaatacaaggcgagaacac
gaaatattttctcgcgtatga
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integrated database retrieval system
