Pediculus humanus corporis (human body louse): Phum_PHUM221730
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Entry
Phum_PHUM221730 CDS
T01223
Name
(RefSeq) Nuclear RNA export factor, putative
KO
K14284
nuclear RNA export factor
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03008
Ribosome biogenesis in eukaryotes
phu03013
Nucleocytoplasmic transport
phu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Phum_PHUM221730
03015 mRNA surveillance pathway
Phum_PHUM221730
03008 Ribosome biogenesis in eukaryotes
Phum_PHUM221730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM221730
03009 Ribosome biogenesis [BR:
phu03009
]
Phum_PHUM221730
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Phum_PHUM221730
mRNA cycle factors
Stress granule specific factors
Phum_PHUM221730
Ribosome biogenesis [BR:
phu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
Phum_PHUM221730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
NTF2
LRR_4
LRR_8
UBA_4
UBA_8
ACT_4
DUF5006
Motif
Other DBs
NCBI-GeneID:
8237855
NCBI-ProteinID:
XP_002425827
UniProt:
E0VI83
LinkDB
All DBs
AA seq
623 aa
AA seq
DB search
MPRAVYKKYYDHDDRASGSSNIRKVSFMNGVGGRVKKNRHKFPNNAMLDDGDVNMGGNER
KQWNNRKKNKKQYKGRPGSPTMRNPNFRRDAPLTLSDWYLVKLFYGAKYNEHDLHRLLLK
HLAPHVFKFYFSFTNENHFYFYTDNYEVAVTLRNANRKILLEDGHLLVIRVKEGVPSSVP
VDETIKSRIKAVMSKRYVAETKALDLTKFANDPSFADGTFCPLTRPPIMRAVWQIISEYT
SDIVAINLSSNKLVTFDDSLSIEIKKLKNLRIVYLEDNKIKNISAFNCFKESEVTELELR
KNPLKSFFKDNTHYVSEIRKKFPKLTKLDGMELPPVISFDVAAELITQLPTPQAAFICNP
DGRGIVKAFLSQYFAIYDSDNRLDLAQAYHDTSAFSLCSFYPPNQKSNIVRLNRYTADNR
NLFRVTDYPRRKERLQLGKRNIVEYLSKLPKSQHDLSSFAVDLSLFTPLLINLFVSGVFR
EPSPSTSVKSWPVRHFSRAFLIVPVGQGFCIINDTLFITNATEDQVRCSFIEESQNTSVL
QSPPQNRQIDQAVANLTSAVGSVELNDTVRLQMVETLATKTGMNVAWSKKCLDETNWDFD
RAIWTFTQLQSKGSIPPEAFVKC
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtgccgtttataaaaaatattacgatcatgatgacagagctagtgggagttct
aacattcgaaaagttagttttatgaatggtgttggaggtagagtgaaaaaaaatagacat
aaatttcccaataatgccatgttagacgatggtgatgttaatatgggaggaaatgaaaga
aagcaatggaacaacaggaaaaaaaataaaaagcaatataaaggacgcccaggatctcca
accatgagaaatcctaactttcgaagagatgcaccattaacattaagtgattggtactta
gtcaaattattttatggagcaaaatacaatgaacacgatttgcacagacttttactaaag
caccttgctccgcatgtatttaaattttactttagttttacaaatgaaaatcatttttat
ttctacactgacaattatgaagtagctgttactttgagaaatgcaaataggaaaatatta
ttagaagatggacatttgttagtaattagggtaaaagaaggagtaccttcatcagttcca
gtcgatgaaacgataaaatctagaataaaagctgtgatgagtaaaagatatgttgcagaa
acgaaagcattagatttaacaaaatttgccaacgatccaagttttgcagatggtactttt
tgcccattgacgagacctccaataatgagagctgtttggcaaataattagcgaatatact
tcagacattgtagcaattaatttaagttcaaacaaattagtcacattcgatgattcccta
tcgattgaaattaaaaaattgaaaaatcttagaattgtttatttagaagataacaaaatc
aaaaacattagtgcgtttaattgtttcaaagaatcagaagtcacggaattggaattaaga
aaaaatccattgaaaagttttttcaaagataatactcattatgtcagtgaaatacggaag
aagtttcccaaactcacaaaactggatggcatggaacttcctccggtgatttcgtttgat
gtcgccgccgaattgataacccagctgccgacacctcaagcagctttcatctgcaatcca
gacggaagaggaatagtaaaagctttcttatcccaatattttgcaatttacgattcagac
aacagactggatttggcgcaagcttatcacgacacatcagcattttcattgtgttcgttt
tatccccccaatcagaaaagcaacattgtcaggttaaatcgatacactgcggataacagg
aatctgttcagagtgacggattatccaaggagaaaggaaaggttacaattgggaaagcga
aacattgttgaatatttgtcaaagttgcccaagagtcaacacgatctatcatcttttgct
gttgatttgtctttgttcacgcctcttttaataaatttattcgtgagcggagtcttcaga
gaaccgagtccttcgacatccgtcaaatcatggcccgtgaggcatttttccagagctttt
ttaatcgttcccgtaggacaaggtttttgcataataaacgacacgcttttcataacgaac
gcgacggaggatcaagttcggtgttcgtttatcgaagaatctcaaaacacgagcgttctt
caatctcctccacagaatcgtcaaatcgatcaagccgtggccaatttgacttctgccgtg
ggttcggtcgaattaaacgatacagtccgtttacaaatggtcgaaactttggccacgaaa
acgggaatgaacgtggcttggtctaaaaagtgcttggatgaaacgaattgggatttcgac
agagccatatggacgttcacgcaacttcaatcgaagggaagcattccaccggaagctttt
gttaaatgttag
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