Pediculus humanus corporis (human body louse): Phum_PHUM227550
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Entry
Phum_PHUM227550 CDS
T01223
Name
(RefSeq) ATP-dependent RNA helicase, putative
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Phum_PHUM227550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phu03041
]
Phum_PHUM227550
03009 Ribosome biogenesis [BR:
phu03009
]
Phum_PHUM227550
Enzymes [BR:
phu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Phum_PHUM227550
Spliceosome [BR:
phu03041
]
Complex A
U2 snRNP components
U2 related factors
Phum_PHUM227550
Complex B
Phum_PHUM227550
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
Phum_PHUM227550
Ribosome biogenesis [BR:
phu03009
]
Eukaryotic type
90S particles
Helicases
Phum_PHUM227550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
Myosin_head
ABC_tran
TsaE
AAA_7
Flavi_DEAD
Microtub_bd
AAA_25
T2SSE
Motif
Other DBs
NCBI-GeneID:
8238664
NCBI-ProteinID:
XP_002425915
VectorBase:
PHUM227550
UniProt:
E0VIH1
LinkDB
All DBs
AA seq
723 aa
AA seq
DB search
MSKRRIEVDPYIKRKRTEEGDNSSSSSGPPAPKYSNQSQSGLSINPYTKLPHTPRYHELY
RKRITLPVFEYREEFMKLLANNQCIVLVGETGSGKTTQIPQWCVEYSRCCGSKGVACTQP
RRVAAMSVAQRVSEEMDVCLGHEVGYSIRFEDCSSSKTMLKYMTDGMLLREGMSDPMLEA
YQVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKFQQYFDNAPLMNVP
GRTHPVEIFYTPEPEKDYLEAAIRTVIQIHMCEEIPGDILLFLTGQEEIEDACKKIKREI
EGIGPEIGDMKCIPLYSTLPPNLQQRIFEPAPPNKPNGAIGRKVVVSTNIAETSLTIDGV
VFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTENAYKQE
MQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLEALDDDG
NLTQLGAIMAEFPLDPQLAKMLIASCDHNCSNEILSITAMLSVPQCFVRPNEARKAADDA
KMRFAHIDGDHLTLLNVYHAFKQNMEDPQWCYDNFVNYRSLKSGDNVRQQLSRIMDRFEL
KRTSTEFTSKDYYINIRKALVAGFFMQVAHLEKTGHYLTIKDNQVVQLHPSTCLDHRPEW
VIYNEFVLTTKNYIRTVTDIKPDWLLKIASQYYDLENFPQCEAKRQLELLQSKLESRQYQ
EGF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaggagaatagaggtagatccttacattaagagaaaaaggaccgaagaaggt
gacaattcttcttcttcctccggaccccccgcacctaaatattcaaatcaatctcaatca
ggattatctataaacccttacacaaaattacctcacactcctcgctatcatgaattgtat
aggaaaagaattaccttgcccgttttcgagtatcgagaagagtttatgaaattgttagca
aataaccagtgtatagtattagtgggtgaaacgggttcgggaaaaactactcaaatacca
caatggtgtgtagaatactcaagatgttgtggttccaagggggttgcttgtacacaacca
agaagagtagctgctatgtcggttgctcaaagagtatctgaagaaatggatgtttgcctg
gggcatgaagtgggttatagtataagatttgaagattgttcttcatcgaaaactatgctt
aagtatatgacagatggtatgttgctcagagagggaatgtcagatcctatgttagaagcc
tatcaagtgattttacttgatgaagctcatgaaagaaccttagcaactgatattttgatg
ggtgttttaaaagaagttatcaaacaaagagcagatttaaagcttgttattatgtctgcc
acactagatgctggaaaatttcagcaatattttgataatgctccgttaatgaatgtacct
gggcgaactcatcctgttgaaatattttatactccagaaccggaaaaagattatttggaa
gctgctatacgtactgtgatacaaatacacatgtgtgaagaaatacctggagatatttta
ttgtttttaacaggacaagaagaaattgaagatgcttgtaaaaaaattaaaagagaaatt
gaaggcattggacctgaaataggtgacatgaaatgcattccattatattcaacattgcct
cccaatttgcaacaaagaatatttgaaccagctcctcctaataaacctaacggcgccatt
ggtagaaaagttgtcgtttcgacaaatattgcagaaacttcattaactattgatggagtt
gtgtttgttattgatccaggatttgctaaacaaaaagtttacaatcctcgtattagagtc
gaatctctgttagtgtctcctataagtaaagcttctgctcaacaaagagccggtagagcg
ggtagaacgcgccctggaaaatgttttaggctttacacggaaaatgcgtataaacaagaa
atgcaagataatacttatccagaaattttaagatcaaatttagggtcggttgttttgcaa
ctaaaaaaacttggaattgacgacttggttcattttgacttcatggatcctccagctccg
gaaacgcttatgagagcattagaacttctcaactatttagaggctcttgacgatgatgga
aacttaactcagttgggcgccatcatggccgaatttcctttagatcctcaattagcaaaa
atgttgatagctagctgcgatcataattgttccaatgaaattctttccatcacggctatg
ctctcagtcccacagtgtttcgtgagaccaaatgaagcaagaaaagcggctgacgatgca
aaaatgagattcgctcacatagatggtgatcatttaacacttttaaacgtttatcacgcc
ttcaagcaaaacatggaagatccacaatggtgttatgataattttgtcaactatagatct
ctcaaatcgggggataacgttagacaacaattgtcgagaatcatggatagatttgagtta
aaaagaacgtcaacagaattcacgtcgaaagattattacatcaatataaggaaagcgtta
gttgctggatttttcatgcaggtggcacatttagaaaaaaccggacattatttaacaatt
aaggataatcaagttgttcaattacatccatcaacttgtctcgatcatagaccggaatgg
gttatttacaacgaattcgtattgacgacaaaaaattacattaggacagtcacagacata
aaaccggattggttacttaaaatcgcttcacaatattacgatttagaaaattttccacaa
tgtgaagccaaaagacaattggagcttttacaatcaaaacttgaatcaaggcagtatcag
gaaggtttttga
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