Pediculus humanus corporis (human body louse): Phum_PHUM233570
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Entry
Phum_PHUM233570 CDS
T01223
Name
(RefSeq) Parkin, putative
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu04120
Ubiquitin mediated proteolysis
phu04137
Mitophagy - animal
phu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Phum_PHUM233570
04120 Ubiquitin mediated proteolysis
Phum_PHUM233570
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
Phum_PHUM233570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phu04131
]
Phum_PHUM233570
04121 Ubiquitin system [BR:
phu04121
]
Phum_PHUM233570
03029 Mitochondrial biogenesis [BR:
phu03029
]
Phum_PHUM233570
Enzymes [BR:
phu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
Phum_PHUM233570
Membrane trafficking [BR:
phu04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
Phum_PHUM233570
Aggrephagy
Other aggrephagy associated proteins
Phum_PHUM233570
Xenophagy
Other xenophagy associated proteins
Phum_PHUM233570
Ubiquitin system [BR:
phu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
Phum_PHUM233570
Mitochondrial biogenesis [BR:
phu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
Phum_PHUM233570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
IBR_1
IBR
ubiquitin
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
8230172
NCBI-ProteinID:
XP_002426043
UniProt:
E0VIU9
Structure
PDB
PDBj
LinkDB
All DBs
AA seq
461 aa
AA seq
DB search
MSILEWFWNILCGMAQYLTFSKNLTNDNLVNIYVKSNVGGTISVNLDPKSDIKNVKELVA
PKLGLEPDDVKIIFAGKELLDSTVIEVLDFFSDILHAVKVNKKIKNVIPDKPLCETLEEL
HQLNDQKNVESIEESNLKNEGKNKAHFFIYCANPCKKINTGKLRVCCSECKHGAFTVDTD
PQSWADVLDKNKITGVCNNVGCEGLYAKFYFKCASHPSQGENDTAVPLNLIKRNHKKIPC
LACTDICDPVLVFSCDNRHVTCLECFKNYCGSRLKDRQFLSHPDFGYTLPCPAGCSNSFI
EEVHHFRLLTDAQYEQYHRFATEEFILQAGGVLCPQPGCGQGILIDQNCNRVQCSCGYVF
CGKCLEGFHLGECLNPTDVPFLSQNCDYPLDPEKLEKARWDEASSTVIKVLTKPCPKCRT
STERAGGCMHMICTRANCGFHWCWVCQGPWERDCMASHWFG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtctattttagaatggttttggaatatactttgtggaatggcgcaatatcttactttt
agtaaaaatttgacaaacgataatttggtaaatatttacgttaaaagtaatgtcggtggt
actatttcagttaatttagatcctaaaagcgatattaaaaacgttaaagaactggtagca
ccaaaattgggtttagaacctgatgatgtgaaaataatttttgctggaaaagaacttttg
gattctactgtaattgaggtactcgatttcttttcagatattttgcatgctgtaaaagta
aacaaaaaaattaaaaatgttattccagacaaaccactttgtgaaactttagaagaactt
catcaattgaatgatcaaaaaaatgtcgaatcaatcgaagaatcaaatttaaaaaatgaa
ggaaaaaataaagctcatttttttatttattgtgccaatccatgtaaaaaaataaataca
ggtaaattaagagtatgttgttcggaatgcaaacatggagcttttactgttgataccgat
cctcaaagttgggctgatgttcttgataagaataaaataacgggagtttgtaataatgtg
ggctgtgaaggattgtatgctaaattttattttaagtgtgcctctcatccttctcaaggg
gaaaatgacacagcagtgcctttgaatttaataaaaaggaatcacaaaaaaattccttgt
ttagcctgtactgacatatgtgatccagttttggttttttcatgtgacaatagacatgtt
acttgtcttgaatgttttaaaaattattgtggttcacgacttaaagacagacagtttttg
tctcatcctgattttggttacactttgccatgtcctgcaggatgctctaattcatttata
gaagaagttcatcattttagattgttgactgatgctcaatatgagcaatatcacagattt
gcaactgaagaatttattttacaagcaggaggagttctttgccctcaacccggttgcggt
cagggaatactcattgatcaaaattgtaatcgtgtacaatgcagttgtggttatgtattc
tgtggtaaatgtttagaaggttttcatctgggagaatgcttgaatcccacagatgtgcca
tttttatctcaaaattgtgattatcctttggatccggaaaaattagaaaaagccagatgg
gatgaagcatcatcgacagtcatcaaagtactaaccaaaccatgccccaagtgtagaact
tcaacagaaagagctggaggatgtatgcacatgatttgcactagagctaattgtggattt
cattggtgttgggtttgtcaaggtccttgggagagagattgcatggcaagtcattggttt
ggttaa
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