Pediculus humanus corporis (human body louse): Phum_PHUM299460
Help
Entry
Phum_PHUM299460 CDS
T01223
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Phum_PHUM299460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phu03041
]
Phum_PHUM299460
Enzymes [BR:
phu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Phum_PHUM299460
Spliceosome [BR:
phu03041
]
Complex C
Other components
Step II factors
Phum_PHUM299460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_30
NB-ARC
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
8229792
NCBI-ProteinID:
XP_002427158
UniProt:
E0VM14
LinkDB
All DBs
AA seq
1236 aa
AA seq
DB search
MDELQKLEHLSLVSKICTELENHLGINDKDLAEFIIALSEKNNTFESFKAILLKNGAEFS
DSFIENLLRLIKHMQPKDKPKLEKTVKDVLAEKFPAFTEDQSNDVNEAMAVLESLAPSNI
AKMAEINNLSRDEKLIKNENTKLGDNRENKDVSPAKSLSPERKHKRKDRESTKDDKSNYK
KTKIRNRSRSRSRSRSRKLKHDRYSHQDKDYKRRRSRSHSRSLHRKKRSSLERRKMSRSP
SYDRKKFQRNFYSKDENVRNQTHRGRSKTPEKDLPCDPEVGKIYNGKIANIVPFGCFVQL
ENLRKRWEGLVHISQLRREGRITTVADVVSRGQKVKVKVLSVTGQKVSLSIKDVDQDTGK
DLNPITQGLREQEEEIAHRNPDRPISLLELQRNHDEEEGESRKRVHRISSPEKWELKQMI
SASCINRSELPDFDEETGLLPREEDEEEDIEIELVEDEPPFLQGHGRMLHDLSPVRIVKN
PDGSLAQAAMMQSALSKERREQKMLQREQEMDSMPQTLNKNWIDPLPEADTKTVTANMRG
VGVISQDLPEWKKHVIGGKKSSFGKKTNMTLLEQRESLPIFKLKDDLIKAVTDNQILIVI
GETGSGKTTQITQYLAESGFTFRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIR
FEDCTSPETVIKYMTDGMLLRECLVDLDLKNYSVVMLDEAHERTIHTDVLFGLLKQAVRK
RPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQI
HLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEP
APPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLVVTPISQFQSKQR
AGRAGRTGPGKCYRLYVERAYRDEMLPTPVPEIQRTNLATTVSFKKLKTMGINDLLHFDF
MDAPPVESLIMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVHLGCSDEI
LTIVSMLSVQNVFYRPKDKQALADQKKAKFNQMEGDHLTLLAVYNSWKNNKFSNAWCYEN
FVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKNTVRVQKCVCSGFFRNAAKKDPQEGYR
TLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPAFFKFSD
PTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacttcaaaaattagagcatctgtctttagtttcaaaaatatgcacagaatta
gaaaaccatcttggtataaatgataaggatttagctgaatttataattgcattgtcagaa
aaaaacaatacttttgaaagtttcaaagcaatccttttaaaaaatggagcagaattttct
gattcatttatagaaaatttacttcgtttaatcaaacacatgcaaccaaaagataaacca
aaattggaaaaaacagtgaaagatgttttggcagaaaagtttcctgcttttactgaagat
caatctaatgatgtaaatgaagcaatggctgtattagaatctctggcgccatcaaatatt
gctaagatggcagaaatcaacaatttatcaagagatgaaaaacttattaaaaatgaaaat
acaaaacttggtgacaatagggaaaataaagatgtttctcctgctaagagtcttagccca
gaacggaaacataaaagaaaagatagggaatcaacaaaagatgacaaaagtaattataaa
aaaactaaaattagaaatagaagtcgaagcaggagcagaagtagaagtagaaaactaaaa
catgatagatattctcatcaagacaaagactacaagaggagaagatccagatctcattct
agaagcttgcatagaaaaaaaagatctagtcttgaaagaaggaaaatgtctagatcacca
agttatgacagaaaaaaatttcaaagaaatttttactctaaagatgaaaatgttagaaat
caaactcatagaggtagatctaaaactccggaaaaagatttaccttgtgatccagaagtt
ggaaaaatttataatggaaaaatagctaatatagttccttttggctgttttgtacaatta
gaaaatttaagaaaaaggtgggagggattagttcacatatctcagttaagaagagaggga
agaataactacagttgctgatgtcgtatctcgtggtcaaaaagtaaaggttaaggttctt
tcagtaaccggacaaaaagtttcactgtcgattaaagatgttgatcaagatacaggaaaa
gatttaaatccaatcacacaaggccttagagagcaagaggaagaaattgctcacagaaat
ccagatagacctatatctttattagaactgcaaagaaatcatgatgaggaagaaggagaa
agtagaaaaagagttcatagaatatcttcacctgaaaaatgggaattaaagcaaatgatt
tctgcatcctgtataaacaggagtgaattaccagatttcgatgaggaaaccggtttactt
ccaagggaagaagatgaagaagaagatatagaaattgaattggtagaagatgagcctcct
tttttgcaaggacacggtcgaatgcttcacgatttgagtcctgttagaatagttaaaaat
cctgatggtagtcttgctcaagctgcaatgatgcaaagtgcattatcaaaagaaagaagg
gaacaaaaaatgttacaaagagaacaagaaatggattcaatgcctcagacattaaataaa
aactggatagatccattaccagaggctgataccaaaacagtgacagccaacatgagagga
gttggagtaatttctcaagatttaccagagtggaaaaaacatgtcattggaggaaagaaa
agttcttttgggaaaaaaacaaacatgacattactcgagcaaagagaaagtctcccaatt
tttaaacttaaagatgatcttattaaggctgtaacagacaatcaaattttaatagtgatt
ggagaaacgggttctgggaaaactactcaaatcacacaatatttagcagagtctggtttt
acgttccgtggtaaaatagggtgcacccaacctcgaagagttgcagctatgagcgtagca
aaacgtgtagctgaagaatttggatgccgtttgggacaagaagtgggctacacaattcgt
ttcgaggattgtaccagtccagaaacagttattaaatacatgacggacggtatgcttctt
agagaatgtcttgtagatttggacttgaaaaattattcagtcgtaatgttagatgaggct
catgaaagaactattcatacggacgttttgttcggtttattaaaacaagctgtgagaaaa
cgtccggaattaaagcttattgtaacttcagccacattagacgcagttaaattttcccag
tattttttcgaggctcctatttttactatacctggaagaacatttccggtagaagtattg
tatacaaaagaaccggaaactgattacttggatgctagtttaattactgttatgcagatt
catcttcgagaacctcctggtgatattttactttttttaactggtcaagaagaaatcgat
actgcttgtgaaattttatacgaaagaatgaaatcgctgggtccggatgtgcccgagctc
attattcttccagtgtattccgctcttccaagcgaaatgcaaaccagaattttcgagcct
gcacctcctggttcacgtaaagtagttattgctacgaatattgctgaaacttctctaact
attgatggaatttattatgttgtcgaccctggattcgttaaacaaaaagtttataattca
aagacaggaatggatagtttagtagtgacccctatatctcagtttcagtccaagcagcgc
gcgggaagagctgggagaactggacctggaaagtgttacagattatatgttgaaagagct
tacagagacgaaatgcttcccactcctgttccagaaattcaaagaacgaatctcgccaca
accgtaagttttaaaaaattaaaaactatgggtataaatgacctacttcatttcgatttt
atggacgctccacccgtagagtctttaattatggctctcgaacaattgcattctttgagc
gctttggatgatgaaggtcttctaactcgattgggtagaagaatggcagaattcccgttg
gaacctaatttatctaaaatgttaattatgtcagttcatttaggatgttcggatgaaatt
ttaaccatcgtttcaatgcttagcgttcaaaatgtattttacagacctaaagataaacaa
gcattagccgatcaaaaaaaagcaaaatttaaccaaatggagggagatcatttaactctt
ttggctgtttacaattcgtggaaaaacaataagttttcaaatgcttggtgctacgaaaac
tttgtacaaattcgaacgttaaaaagagctcaagatgtgcgaaagcaattgttgggtatc
atggacagacataaactggatgtagtttctgctggaaaaaataccgtaagagttcaaaaa
tgtgtttgttcaggtttttttagaaatgcagccaaaaaagatccacaggaaggttataga
accttggtcgatagtcaagttgtttacattcatccttccagtgcattatttaacagacaa
ccggaatgggttatttaccacgagttggttcaaaccacgaaggaatatatgcgggaagtg
acaacgattgatcctaaatggttggttgaatttgccccggcattttttaaattttcagac
ccgactaagctgagtaaatttaaaaagaatcaacgattagaacccttgtataataaatat
gaagaaccgaatgcatggagaatatctcgagttcgcagaaggagaaattaa
DBGET
integrated database retrieval system
