Pediculus humanus corporis (human body louse): Phum_PHUM318750
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Entry
Phum_PHUM318750 CDS
T01223
Name
(RefSeq) Exosome complex exonuclease RRP4, putative
KO
K03679
exosome complex component RRP4
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Phum_PHUM318750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM318750
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Phum_PHUM318750
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Phum_PHUM318750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
8236069
NCBI-ProteinID:
XP_002427432
UniProt:
E0VMT8
LinkDB
All DBs
AA seq
296 aa
AA seq
DB search
MSENVFIRLGALRINPIIDNNNDTSNIYTPGETITCQTGFMRGHGTYVDDDNNALKASVA
GSVEQVNKLISMRPLKSRYFGEIGDVIVGRITEVQQKRWKVDTNSRLDSILSLSSVNLPG
GELRRRSVEDEQMMRKYLQEGDLISAEIQNILSDGTLQLYTRSLKYGKLSQGILLKVFPS
LVRRSKTHFHSLPCGANIILGNNGFIWITPAALEDKKGGFTQDLKYKVSKTDRIVLSRLR
NCILALANSKMPLYDTSVMYAYEESQKYTVSELLAPEPMLDVAVLTTLRLQMIEDE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaatgtttttattcgattaggagctttgagaatcaatccaattattgataat
aataatgatacatcaaatatatatactcctggtgaaacgataacatgtcaaacaggattt
atgcgtggtcacggaacttatgtagatgatgataacaacgcattaaaagcttctgtggct
ggtagtgtagaacaagttaataaacttatatctatgcgtcctctcaaatcaagatatttt
ggagaaataggagacgttattgtaggaagaattactgaagtccaacagaagcgatggaaa
gttgatacaaattctaggttagattccattctttccctctcctccgttaatttaccagga
ggagagttaagaagaagatctgtggaagatgaacaaatgatgagaaaatatttacaagaa
ggagatttaatttctgctgaaatacaaaatattttatcggatggaactcttcagttgtac
acgagaagtttaaaatatggtaaattatcacagggtatcttgctcaaagtttttccttca
ttggttagaagaagtaaaacacattttcatagtttaccatgcggtgcgaatattatatta
ggcaataatggatttatatggattacaccggctgccttggaagacaaaaaaggaggtttc
actcaagatttaaaatataaagtttccaaaactgatagaatagttttaagtagattaaga
aattgtattcttgctcttgctaattcgaaaatgcctttgtacgatacaagcgtcatgtat
gcttatgaagaatcacaaaaatacactgtatcggaattattagcacctgaaccaatgtta
gatgttgcagtacttacaactttaaggcttcaaatgatcgaggatgaataa
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