Pediculus humanus corporis (human body louse): Phum_PHUM345900
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Entry
Phum_PHUM345900 CDS
T01223
Name
(RefSeq) DEAD box ATP-dependent RNA helicase, putative
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Phum_PHUM345900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM345900
03036 Chromosome and associated proteins [BR:
phu03036
]
Phum_PHUM345900
Enzymes [BR:
phu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Phum_PHUM345900
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
Phum_PHUM345900
mRNA degradation factors
5'-3' decay
Decapping complex
Phum_PHUM345900
Chromosome and associated proteins [BR:
phu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
Phum_PHUM345900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
8231882
NCBI-ProteinID:
XP_002427795
UniProt:
E0VNV1
LinkDB
All DBs
AA seq
460 aa
AA seq
DB search
MAIHIPCVITNHITKMMTETHISNIMMPALNSIASGKVEVEKPDEGWKSKLKRPPPDRRV
QTSDVTDRKGNDFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTG
KTGAYTIPVLELVDPKKDVIQALIIVPTRELALQTSQICIELAKHMETKVMVTTGGTNLR
DDIMRIYQKVQVVIATPGRILDLMEKNVANMDECKTLVLDEADKLLSQDFQGMLDHVISR
LPKDRQILLYSATFPVTVKNFMEKHLHEPYEVNLMEELTLKGVTQYYAFVQERQKVHCLN
TLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRNGLCR
NLVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRLAL
HRIEQELGTEIKPIPKVIDPSLYVAKLEDTQGIEEVNVSK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggctattcatataccttgtgttatcacaaatcatattaccaaaatgatgactgaaaca
catatttccaatattatgatgcctgctttaaacagtattgcttctggaaaagtggaagtt
gaaaaaccagatgaaggatggaagtcaaaattaaaaagacctccacctgatagaagagtt
cagactagtgacgtaactgacaggaaaggaaatgattttgaagaattttgtttaaaacga
gagctactaatggggatttttgaaaagggttgggaaaaaccttctccaattcaagaagct
agtattccaatagcattatctggaaaagatattcttgctagggcaaaaaatggaactgga
aagactggggcctacactataccagttcttgaattggttgatccgaaaaaagatgttatt
caagctcttataatagtaccaactagggaattggcactccagactagtcaaatctgtatt
gaactggctaaacacatggaaacaaaagtgatggtaactactggcggaaccaatttaagg
gatgatattatgcgaatttaccaaaaagtacaagttgttatagccactccgggacgaata
ttggatcttatggaaaaaaatgtagctaatatggatgaatgcaaaacgttagttttggat
gaagctgataaattattatcacaggattttcaaggaatgttggatcatgttatttcacgt
ttgccgaaggatagacaaattttactttattcagctacctttcccgtaacagtaaaaaat
tttatggaaaagcatttgcacgaaccttacgaagtgaatttaatggaagaattgacgctt
aaaggtgtgacgcaatattatgcctttgttcaagaaaggcaaaaagtccattgtttaaat
acgttattttcaaaactacaaataaatcagagtattatattttgtaattcaacgcaaaga
gtggaattgcttgcgaaaaaaattacagaacttggatattgttgttattatattcacgct
aaaatggctcaagcccacaggaatagagtatttcacgattttagaaacggtctttgtaga
aatcttgtttgttctgatttatttacaagaggtatagatgtacaagcagttaatgtagtt
attaattttgattttcctaaaatggcagaaacatatcttcatcgcataggtagatctgga
agatttggccatcttggaatcgcaataaatttaatcacatacgaagatagactcgctctt
catagaattgaacaagaattgggaactgaaattaagcctattccgaaggttatcgatcct
tcattgtatgtcgctaaattagaagacactcaaggtattgaggaagtaaatgtaagtaaa
taa
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