Pediculus humanus corporis (human body louse): Phum_PHUM376530
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Entry
Phum_PHUM376530 CDS
T01223
Name
(RefSeq) pre-mRNA splicing factor, putative
KO
K12855
pre-mRNA-processing factor 6
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Phum_PHUM376530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phu03041
]
Phum_PHUM376530
Spliceosome [BR:
phu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
Phum_PHUM376530
Complex C
U5 SnRNP specific factors
Phum_PHUM376530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
PRP1_N
TPR_19
HAT_PRP39_N
TPR_16
HAT_Syf1_CNRKL1_N
TPR_17
HAT_PRP39_C
Suf
TPR_2
TPR_15
TPR_8
TPR_1
Iml2-TPR_39
ARM_TT21
ARM_TT21_N
TPR_9
Wzy_C_2
TPR_12
Tcf25
DUF4404
Motif
Other DBs
NCBI-GeneID:
8240235
NCBI-ProteinID:
XP_002428334
UniProt:
E0VQE0
LinkDB
All DBs
AA seq
935 aa
AA seq
DB search
MAIPHAALVNRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPS
KRKKKDEEEEEEEDLNDSNYDEFSGYGGSLFSKDPYDKDDEEADQIYEAIDKRMDEKRKE
YREKRLKDELERYRQERPKIQQQFSDLKRGLISVTEDEWRNVPEVGDARNRKLRNPRAEK
FTPLPDSVLSRNMAGESATSIDPTSGLASTFPSGNATPGFSTPGMLTPTGDLDLRKIGQA
RNTLMNVKLSQVSDSVEGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNP
NHPPAWIASARLEEVTGKVQAARNLIMKGCEVNPKSEDLWLEAARLQPPDTARAVIAQAV
RHIPTSVRIWIRAADLEAETNAKRRVYRKALEHIPNSVRLWKAAVELEDPEDARILLSRA
VECCPTNVDLWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEANGNKHMVDKI
IDRAISSLSANGVEINREHWFKEAMEAEKAGSVHTCQVVIRAVIGQGVEEEDRKHAWLED
AEMCASQGAFECARAIYAHALSTFPSEKSIWLRAAYFEKAHGTRESLEALLQRAVAHCPK
SEVLWLMGAKSKWLAGNVSAARSILALAFQANPNSEEIWLAAVKLESENSEYERARRLLA
NARASAPSPRVLMKSAKLEWALNDLDKAHKLLEEAIKMFPDYPKLWLMKGQIEEQQNMVD
KALETYNLGIKKCPSSVPIWRLLANLEERRGLLTRARSVLEKGRLRNPKNAELWLEAIRI
ESRAGLKDIANNLMAKALQECPNSGILWAEAIFMESRPQRKTKSVDALKKCEHDPNVLLA
VSKLFWCERKLQKCREWFNRTVKVDQDLGDAWAYFYQFELLNGTEETQSDVKKRCVAAEP
HHGEFWCQVSKNIRNWKYSTEVILSLVAKQLPVPV
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcaatacctcatgcagctttggtaaatagaaataaaaaacattttctgggcgtaccg
gctcctttgggatatgtagctggagtaggaagaggggctactgggtttactacccgatct
gatattggacctgctcgagatgccaatgatgtatctgatgatagacatgcgcctcctagt
aaaaggaaaaaaaaggatgaggaggaagaagaagaagaagatttaaatgactccaattat
gatgaattttcaggatatgggggttcactttttagtaaagacccttatgataaggatgat
gaagaggcagatcagatttatgaggctatcgataaacgtatggatgaaaagagaaaagag
tacagagaaaaaaggctgaaagatgaattggaaagatacagacaagaaagaccaaaaatt
cagcaacaatttagtgacttgaaacgaggtttgatatctgtaactgaagatgagtggaga
aatgtcccagaagtaggagatgcaaggaatagaaaattaaggaatccaagagctgaaaaa
tttacacctttgccagactctgtattatctagaaacatggctggggagtctgcaacctct
atagatccaacaagtggtttagctagtacatttccatcaggaaatgctacccctggtttt
tcaactcctggtatgttaacacctacaggagatttagatttaagaaaaattggtcaagcc
agaaacactctaatgaatgttaaactaagtcaagtatcagattccgttgaagggcaaact
gttgtagatccaaaaggatatttaactgaccttcaaagtatgattcctacatatggaggt
gacattaatgatataaaaaaggctagattgttgcttaaatcagtacgtgaaaccaatcct
aatcatccaccggcatggatagcatctgccagattggaagaagtcactggaaaagttcaa
gctgctagaaatttgataatgaaaggttgtgaagttaatccaaaatctgaagatctttgg
ttagaagctgcacgtttgcagcctcctgacacagcaagagctgttattgctcaagcagtt
cgacatataccaacatcagtaagaatttggattagagcagccgacttggaagcagaaact
aatgctaaaagaagagtttatagaaaggcattagaacacattcccaattctgttagactt
tggaaagcagcagtagaattagaagatccagaagatgctagaattcttttaagcagagcc
gtagaatgctgtcctacaaatgttgatttatggcttgcacttgcccgacttgaaacttat
gaaaatgcaagaaaagtactaaacaaagctagggaaaatattccgaccgatcgtcaaatt
tggactactgccgctaaattagaagaagccaatggcaacaaacacatggttgacaaaata
attgacagggcaatatcatccctaagtgcgaatggcgtggagattaatagagagcattgg
tttaaagaagcaatggaagctgaaaaagctgggtcggttcatacatgtcaagtggtaatt
agagcggtcataggtcaaggtgttgaagaagaagataggaaacatgcttggttagaagat
gcagaaatgtgtgccagtcagggagcatttgaatgcgcgagagcaatttacgcccacgca
ctatcaacttttcctagcgaaaaatcaatttggttaagggctgcttattttgaaaaagct
cacggaacgcgagaatccttagaagcgttgcttcaaagagctgttgcacattgtccaaaa
tcagaagtattatggctgatgggtgccaaatcaaaatggcttgcgggtaatgtgtctgct
gctcgaagtattttagcattagcttttcaagctaatccaaattcagaagaaatatggttg
gcggctgttaaattagaatctgaaaattcagaatatgagagagcaagaagattactagca
aatgctagagcttctgctccaagtccaagggtgttaatgaaatcagcaaaattagaatgg
gctttaaatgatttagataaggcacacaagttattagaagaggctataaaaatgtttcca
gattatcctaaattgtggctcatgaagggtcaaatagaagagcagcaaaatatggtggat
aaagctttggaaacatacaatttagggattaaaaaatgtccctcatctgtaccaatttgg
agattacttgctaatttagaagaaaggcggggattactaacgagagcccgttctgtttta
gaaaaaggaaggttaaggaatccaaaaaatgccgaattgtggttggaagcaataagaatt
gaatcaagagccggtttaaaagatattgctaataatttaatggccaaagctctacaggaa
tgtcccaattctggtattttatgggctgaagctatatttatggaaagtagacctcaaaga
aaaactaaaagcgttgatgctttgaaaaaatgtgaacatgatcctaatgttctcttggca
gtttcaaaattattttggtgtgaaagaaaattgcaaaaatgccgcgaatggttcaataga
acagtaaaagtcgatcaagatttgggagatgcctgggcttatttctatcaatttgaatta
ttgaatggaaccgaagaaactcaaagtgacgttaaaaaaagatgcgttgccgcggaaccg
caccatggagaattttggtgtcaagtttcaaaaaatattcgcaactggaaatacagtacg
gaggttatactttcattggtggccaaacaattacctgttccagtttaa
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