Pediculus humanus corporis (human body louse): Phum_PHUM394530
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Entry
Phum_PHUM394530 CDS
T01223
Name
(RefSeq) snf2 histone linker PHD ring helicase, putative
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
phu
Pediculus humanus corporis (human body louse)
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phu04121
]
Phum_PHUM394530
Enzymes [BR:
phu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Phum_PHUM394530
Ubiquitin system [BR:
phu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Phum_PHUM394530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SIR2
SHPRH_helical-1st
SHPRH_helical-2nd
Helicase_C
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_4
zf-RING_5
TPR_10
TPR_12
TPR_7
TPR_1
Motif
Other DBs
NCBI-GeneID:
8237685
NCBI-ProteinID:
XP_002428623
UniProt:
E0VR79
LinkDB
All DBs
AA seq
1709 aa
AA seq
DB search
MSKRKNFCPLKLNQSYPSEFEASFSTPKKKRVTFQEALSENILINKFKNRTKFKIKKLLK
VVPNGGVILGELTFSFDEINFVDFDMDNCEYLFLVNDTEEIIKIILKISSCSNKNSFKLV
NLEMNDDILLLIIDDLLQHKFYWIIDEKALTEKVLKVKIVITPEKTPISKATSLINLFFS
KTFSNEFIENGNCKKGFIQEFFKEIQNYQKLDEKVPEKNINQDDLIPVLRPYQEKAVEWM
IFRESCELQVQNFNWISTVIETLTSKCNNKIYYNKYTGLLTLEMVNFLPFPKGGILADEM
GLGKTVAIISLILNHKFNVEKENETSYLLPHALNETHKKMLHNSNNCVKNNSEIIAKNKE
GCLNAHEKLILNNVSRGSALRKALNEWYESKLAEYSAGPANKLKSKENNKIKCICGNFAS
KKREICVECPECKRWQHGECVGFNEKFLYYCPSCWPKQKLVCSGATLIIAPASIYHQWFD
EINKHVKPNALSNGVFMYNGLKDGFVQPSVLAANDIVVTTYTILGSEFNHTTQHGGDRKL
RNEERFLKMSSPLTQVQWWRLCLDEAQMVENDHSQINQMVNLISAINRWSVTGTPIQKSI
NELYYLIEWLKVEPFTEKSLWHNFLYQPFINGNKIPLYSVLSKIFWRNSKEDVASELNLP
EQTVQYHFLKFSAIEQNFYMREHSVSSTDFSERLFRLGLEKNRTIDSLDKTTLTSLLAPL
LNLRQACSHPMAVKGSKIFSKTGNMTLSELLQYLFNKTKVECEEAMRLHIATLNGLAGIH
TILEEWSTAVEYYRQVLQIVEEHKEKIHVDSLQRIHTLTNLAEVLQYHSEGIPPTLRDES
LISHAKILEDKYMENAIADLKSDENILNGLTSKISNLEKNFESAPGVWWNRAIHILTVDG
SIRELKDKIETELITNEVDTKKQVEFFLSKISSVKGVEIMLRNWLTGIKENREKALKNLE
TLREMSNESLVGSAVDCHLRSTTSGDAKKKEKKKCQLCICESVLLDYECSLFDVSRKVLR
DNYEKAIDGAQTKGSWRAHKAEKCLKALLNVSKSKKNMETWCVNDGKTHVQILEAMKKEF
KQIRAVWMSINHQVQAFDEISMCKLRLRLRLPDEPLPPKKSSNLSLKEQNKVETIFIIEN
HEVEPQRLKLTSELEQSKSEFKKKYGTLLYLKNLGQKENPKPEPCPVCKTVLENEWCVLQ
CGHSFCIDCIRIMLTRSSKPSLSCPVCRETTKSCDLGFIDMSGNQEDSGIKVIGDHSTKV
DGIVRSLLSLKREDENVKVLIFSTWGVVLKILEVALTQNNISFRRMPGHNYQIHLKQFKD
PNLKVTALLLPISWGSKGLNLTEANHVFLVEPIMNPAEELQAVGRVHRIGQTKKTTVHKF
LIKGTIEEKINDAVSSEGKEKWVQKKVTVEDLTNLFDMKKDFSVKVMLLQTYWTHRLPVS
LFKSKTSIFATAMTSIQRPSSNMAAFRDVFKRSKNLLILTGAGVSAESGIPTFRGPGGYW
RKYQAQNLATPEAFRANPSLVWEFYHHRRETALTKEPNNAHKAIAECQNRFAKEGKKVWI
ITQNIDELHKRAGASDVIELHGSLFKTRCLKCKEIRENYDSPVCSALDGKGAPDPCAESA
DIPEKLLPRCKKENCGGLLRPHIVWFGENLDPKVLELTEKAVNECDLCLVVGTSSVVYPA
AMFAPQVAYRGVSVAEFNIESTPATGDFE
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagaaaaaatttttgtccgttaaaacttaaccaaagttatccgtctgaattt
gaagcatcttttagtactcctaaaaaaaaaagagttacattccaggaagctttaagtgaa
aatatattaattaataagtttaaaaataggacaaagtttaaaataaaaaaattattaaaa
gttgttcctaatggtggtgtgatattgggtgagttgacattttcattcgatgaaattaat
tttgtcgatttcgatatggacaattgtgaatatctatttttagtaaatgatacggaagaa
attataaagataattcttaaaattagttcatgcagcaataaaaattcatttaaacttgta
aatttagaaatgaatgatgatatactcttattaatcattgatgatttattgcagcataaa
ttttactggattattgatgaaaaagctttaacggaaaaagttttaaaagtaaaaattgtc
attacacctgaaaaaactcctatatcgaaagccacatccctcataaatttatttttttca
aaaacattttcaaatgaattcatagaaaacggtaattgtaaaaaaggttttatacaagaa
tttttcaaagaaattcaaaattatcaaaaactagatgaaaaagttcctgaaaaaaatatt
aatcaagatgatctcataccagtattaagaccatatcaagaaaaggctgtcgaatggatg
atttttcgagaaagctgcgaattgcaagttcagaattttaattggatttcaactgtgatt
gaaacacttacttcgaaatgcaacaataaaatttactacaataaatatacaggtctatta
acgttggaaatggttaattttcttccttttccaaaaggtggaattttagcagatgaaatg
ggtttgggaaaaacagtggctatcatttctctcattctaaatcataaatttaatgttgaa
aaagaaaacgaaacaagttatttgcttccacatgctttgaacgaaactcataaaaaaatg
ttgcacaattcgaataactgtgtgaaaaacaatagtgagataatagcaaaaaataaagaa
ggttgtttaaatgctcatgaaaaattaattcttaataatgtatcaaggggttcagctttg
agaaaagctttgaatgaatggtacgaatcaaaattagcagaatacagtgcaggacctgca
aataaattaaaaagtaaagaaaataataaaattaaatgcatatgtggaaactttgcatcg
aaaaaaagagaaatttgcgtcgagtgtccagaatgtaaaagatggcaacatggcgaatgc
gttggatttaatgaaaaatttttatattattgtccttcgtgttggcctaaacaaaaattg
gtgtgttcgggcgcaacattaataatagctcccgcatccatttaccatcagtggttcgac
gaaataaataagcatgtaaaaccgaatgctttaagcaatggagtattcatgtataacggt
ttaaaagatggtttcgttcagccttctgttttagctgccaacgatattgtcgtcacaacg
tatacaattttggggtccgagtttaatcacactacccaacacggaggtgatagaaaacta
aggaacgaagaaaggtttttaaaaatgagttcgcctttaactcaagtacaatggtggcgt
ctgtgcttggatgaagctcaaatggtcgaaaacgatcattctcaaatcaatcaaatggta
aatttgatctctgccattaatcgttggtctgtcacgggtactccgatacaaaaatcaatt
aacgaattatattacttgatagaatggctcaaagtagagccgtttaccgaaaaatcatta
tggcataattttttatatcagcctttcatcaacggtaataaaattccgctttattcggtt
ttgagtaaaattttttggagaaattccaaagaggatgtggcatccgaattaaatttaccc
gagcaaacggttcagtatcattttttaaaattttcagccatcgagcaaaatttttacatg
agagaacattctgtgagctctactgatttttccgaacgattgtttcgattaggcttggaa
aagaatcgaacgatagattcgctggataaaaccactctaacaagtcttctggcaccgttg
cttaacctccggcaagcttgttcgcaccccatggcggtgaaaggaagcaaaatattcagc
aaaacgggtaacatgactctttccgaattgttgcagtatttgtttaacaaaacaaaagta
gaatgcgaagaggcgatgagattacacatagcaactttaaacggtttggctggaatacac
accattttggaagaatggagtacggccgtggaatactaccggcaagttttgcaaatagtc
gaagaacacaaagaaaaaattcacgttgactcccttcaaaggattcatacattgacaaat
ttggctgaagtgttgcagtatcattcggaaggcataccacccacgctaagagatgagtct
ttgatatcccatgctaaaatattagaagacaagtacatggaaaacgccattgcagacttg
aaatcggatgaaaatattttaaacggtttgacatcgaaaatatctaatctggaaaaaaat
ttcgaatccgcccctggagtttggtggaatcgagctatacacatattgacggtcgatggt
tcgataagagaattgaaagacaagatcgaaacggaattgataacgaatgaagttgacacg
aaaaaacaagtcgaatttttcctcagcaaaatatcatccgtgaaaggagtcgaaatcatg
ctcaggaattggttgacgggaatcaaagaaaatcgcgaaaaagcattgaaaaatttagaa
accctgagagaaatgtctaacgaaagtctcgtcgggagtgccgtcgattgtcatttaaga
tcgacgacgtctggagatgcaaaaaaaaaagagaaaaaaaaatgtcagctttgcatttgc
gagtcggttttattggactatgaatgttcgttgtttgacgtgtcgagaaaagttttgaga
gataattacgaaaaagcaatagacggagcacagacgaaaggatcatggagagcacacaaa
gccgaaaaatgtttgaaagcgttgttaaacgttagcaaatcgaaaaaaaatatggaaacc
tggtgcgtgaacgatggcaaaactcacgtgcaaattttggaagccatgaaaaaggagttc
aaacaaatccgagccgtttggatgagcatcaatcatcaagttcaagcgttcgatgaaata
tcaatgtgtaaattgagattgagattgagactaccggacgaaccacttccgccgaaaaag
tcgtcgaatttaagtttgaaagagcaaaacaaggttgaaacgattttcattatcgaaaat
cacgaagtcgaacctcaaagacttaaactcacgagcgaactcgaacaatcgaaaagcgaa
tttaaaaaaaaatatggaactcttttgtatttgaaaaatttgggtcagaaagaaaatccg
aaacccgaaccgtgtcccgtttgcaaaacggttttggaaaacgaatggtgcgttctccag
tgcggtcattccttttgcatcgattgcattcgtataatgttgacgagaagttcgaaaccc
tcgctgtcgtgtcccgtttgtcgagaaacgacaaaaagttgcgatttgggtttcatcgat
atgagcgggaatcaagaggattccggaataaaagtcatcggggatcattcgacgaaagtc
gacggaatcgtgaggagtttgctgtcgttaaagagggaagacgaaaacgtcaaagtttta
attttttcaacgtggggagtcgttttgaaaattttggaagtcgcgctgactcaaaacaac
atttcttttcgccgtatgccgggtcacaattatcaaatacatttgaaacaattcaaagat
cctaatttgaaagtgacggcattgttactccccatatcgtggggatcgaaaggtttgaac
ctgacggaagccaatcacgtttttctcgtcgagcccatcatgaatccggccgaagaattg
caagccgtcgggagagtgcacaggatcggtcagacgaaaaaaacgacggtacataaattt
ttaattaagggaacgatagaggaaaaaatcaacgacgctgtgagtagcgagggaaaagaa
aagtgggtgcagaaaaaagttaccgtcgaggatttgacaaacctttttgacatgaaaaaa
gatttctctgtaaaggttatgttgttgcaaacatattggacacatcgacttccggtatcc
ctgttcaaatcgaaaacgtcaatttttgccacggcgatgacgtcaattcaacgaccatct
tccaacatggctgcatttcgtgacgtattcaaacgttcgaaaaatttgctgatactgacg
ggagcgggagtgtcggcggaatctggcatccccacatttcgtggacccggaggttactgg
agaaaatatcaggcgcaaaatttagcgacgccggaagcttttcgcgcaaatccgtcactc
gtttgggaattttatcatcacagaagggaaacggctttgacgaaagaacccaataacgct
cataaagcgatcgcagagtgtcaaaatcgttttgccaaagaagggaaaaaagtatggata
ataacgcaaaacattgacgaattgcataagagggcaggggctagtgacgtcatagaactt
cacggatcacttttcaaaacgagatgcctgaaatgtaaagaaatacgggaaaattacgat
agtcccgtgtgctcggctttggatggaaaaggagcgcccgatccgtgtgctgaatctgcc
gacataccggaaaagcttttgccaagatgtaagaaagaaaattgcggaggacttttgaga
ccgcacattgtttggttcggtgaaaatttagatccgaaagttttggaattgacggaaaaa
gctgtcaacgaatgcgatttgtgtttggtcgtcggtacgtcttccgtcgtttatccggca
gccatgtttgctccgcaggtggcgtatcgaggagtatccgttgcagaatttaacattgaa
tcaactccagcaactggagatttcgagtaa
DBGET
integrated database retrieval system
