Pediculus humanus corporis (human body louse): Phum_PHUM396750
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Entry
Phum_PHUM396750 CDS
T01223
Name
(RefSeq) Cleavage stimulation factor 50 kDa subunit, putative
KO
K14406
cleavage stimulation factor subunit 1
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Phum_PHUM396750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM396750
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
Phum_PHUM396750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
CSTF1_dimer
WDR55
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
ANAPC4_WD40
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
NBCH_WD40
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
PEP5_VPS11_N
Beta-prop_WDR75_2nd
Ge1_WD40
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Beta-prop_HPS5
Cytochrom_D1
Beta-prop_SPT8
DUF7099
Beta-prop_DCAF12
Beta-prop_IFT140_2nd
Tricorn_2nd
Beta-prop_RSE1_2nd
Beta-prop_WDR11_1st
Beta-prop_LRRK2
Mcl1_mid
Frtz
Motif
Other DBs
NCBI-GeneID:
8237729
NCBI-ProteinID:
XP_002428667
UniProt:
E0VRC3
LinkDB
All DBs
AA seq
438 aa
AA seq
DB search
MPDIENPPEVNDENVIKRRELLYRLIISQLFYDGHQNIAVNLTSAIQPDPPCPPSDRLFN
LVSEGLKYEKEMQPKKDSRTGLFQDTLLGPGLDLEFDTDIQTNAPEPALYVTAYVTSHKA
PCRACAFSNDGQLIATGSADTSIKILDVDRMVAKAYDERATATQQKENYETHPVIRTLYD
HLDEVTCLEFHPKEAILVSGSRDNTVKLFDYSKSSVKKAYKVLQDAEQVKCMSLHPTGDY
LVVGTNHFVVRVYDLTTAQCYVCNFPSHQHTKAVTSIRYSNDGRQYVTASRDGSIKLWDG
VSNRCINTFQKAHDGSDVCSVEFSRNSKYILSSGKDSLVKLWELTTSRCLIAYTGAGTTG
KQEHRAQAVFNHTEDYVMFPDEATTSLCAWNARNASRRQLLSLGHNGPVRMIMHSPTGPA
FVSCSDDHRARFWQRRTK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgccggacattgaaaatcctcccgaagtaaacgatgaaaacgttattaaaagaagagaa
cttctttacaggcttattataagccaattattttatgacggtcatcaaaatatagccgtt
aatttaacatctgccattcaacctgatcctccatgtcctccatcggatagattgtttaat
ttggtttctgagggtttaaaatatgagaaggaaatgcaaccgaaaaaggactcaagaact
ggattatttcaggatacattattaggaccaggattagatttagaatttgatacagacatt
cagacaaatgctcctgaacctgctttatatgtcactgcttatgttaccagtcataaagct
ccatgtagagcttgcgcttttagtaatgatgggcaattaattgccactggtagtgcagat
acatctataaagattttagatgttgatagaatggtggccaaagcttatgatgaaagagct
acagcaacacaacaaaaagaaaattatgaaactcatccagtcattagaacattatatgat
catttagatgaagttacttgtttagagtttcatccgaaagaagccattttagtatctggt
tcgagggataatacagtcaaacttttcgactacagcaaatcatcagtcaaaaaagcgtat
aaagttcttcaggatgcagaacaagtcaaatgtatgagtcttcatccgacaggagattat
ttagtagtcggaacaaatcattttgtagtcagagtttatgatctcacaacggctcaatgt
tatgtttgtaattttccaagtcatcaacataccaaagcagttaccagtatcaggtacagc
aatgatggtagacaatatgttacagccagcagagatggtagcataaaactatgggatggt
gtatcaaatcgatgtattaatacatttcaaaaagctcatgatggttccgatgtgtgttct
gtagaattttcaagaaacagcaagtacattctttcatctggtaaagattctttggtcaaa
ctttgggaattgacaaccagtagatgtttgatagcatacacaggagcaggaaccacagga
aagcaagaacatagagctcaagctgtttttaatcacacagaagattatgttatgtttcca
gatgaagcgacaacatctttatgcgcttggaatgctcgtaatgcatcaagacgacaactc
ttatcattaggacataatggaccggttagaatgattatgcattctccgactggtcctgca
tttgtgtcttgttctgatgatcaccgagcaagattttggcagagaaggaccaaatag
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