Pediculus humanus corporis (human body louse): Phum_PHUM411770
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Entry
Phum_PHUM411770 CDS
T01223
Name
(RefSeq) collagen alpha-2 precursor, putative
KO
K19719
collagen type II alpha
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
Phum_PHUM411770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
phu00536
]
Phum_PHUM411770
Glycosaminoglycan binding proteins [BR:
phu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
Phum_PHUM411770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
PSP94
FnI_RECK
Motif
Other DBs
NCBI-GeneID:
8234150
NCBI-ProteinID:
XP_002428942
UniProt:
E0VS48
LinkDB
All DBs
AA seq
1569 aa
AA seq
DB search
MGSGKKYNFTFFILILFAIILLVNNVEAKEKRKKKIHPSRIHLVKPQAQQPPIGNEPPPP
PQPPRGNEAPNPNYEEYDYGVDYDYDYDENKTGPQPGAPNGKNLRINLLNATTPPPVTTP
PLPTEAPDKECIVDGQVRFHNEVWKSDECTTCRCDNGLVNIPCSGTKYTPYGECCPVCIP
SEPVTPTPEVNRPTYPYEGDAGAFAGPRGETGPPGERGRPGAIGMPGAPGTPGVPGIPGP
PGPSPDLSNFYAQLAMSQSGGDKGPNDVLGRLPFPQEPFSYLQSQVGPPGPRGPPGPPGP
PGPQGFQGVRGEPSESGPPGPPGPPGPRGLPGLPGKDGSPGEDGEPGMAGAAGPPGSRGL
PGMPGLPGIKGHRGFPGLDGAKGEQGPGGEKGSQGSAGPVGPVGPMGPTGPRGERGREGP
PGPPGLRGIDGIAGPPGQPGAIGKPGAPGFPGNPGNKGDQGATGPKGSQGLQGPRGESGR
PGQPGENGQPGPSGKDGSQGEKGSPGAAGLPGPPGFPGARGAPGLSGSPGQPGVKGAPGM
PGERGLKGEQGMKGEAGSPGPRGIPGTSGSEGKRGKRGLRGPTGLAGTQGERGTPGPRGL
PGPDGAIGPKGQSGDRGPPGPQGPKGNTGEPGRPGPPGLQGLRGLVGRPGPAGKTGPPGD
RGIEGADGKPGEQGPQGIQGLPGPIGLPGEKGLTGEPGKDGEPGPQGPVGPRGDAGKDGS
PGAQGPQGPPGAPGERGASGPPGSTGFQGLPGAPGTPGTPGKDGEMGLQGPPGPIGAPGN
RGERGFPGERGSVGPQGSPGARGETGAQGVDGLPGLPGEKGSKGHVGPPGLVGLPGGRGL
PGQPGEKGERGSSGPIGPEGPSGRQGDRGPQGPLGPPGPPGEPAERGDPGPPGLPGEPGA
AGTPGERGPVGQQGIQGFPGLQGPAGSPGAKGERGSNGAKGEQGSPGLAGKPGDPGVAGL
TGLPGPKGIRGEPGPRGEVGLMGPMGRPGEPGTAGHTGPPGPAGAPGIPGSKGSSGDTGR
PGAPGPIGHPGAPGPEGSKGEQGQQGSPGLIGQPGPQGPPGDRGLPGLPGAAGAPGSRGV
RGAPGESGLPGKPGNEGQQGPQGIAGPPGPPGAPGEQGVEGHAGKPGPPGIAGRTGDKGP
VGPAGPMGPPGAPGQQGSPGLVGAPGPAGERGPRGEVGPQGADGPVGPRGSPGVPGEQGV
KGDQGSEGPKGSKGHRGLIGLQGLPGPQGPPGEKGLTGSPGFPGKDGEVGPKGPPGRDGN
PGIAGLQGPPGVRGAPGDEGKSGPPGPPGPPGPPGPPGDSLAYDAATLAALMGQQGSQVK
GPDPLSGDEPPRMFGDISDEERRNLVLKAYEHLKTTFERFKKPDGKKNYPGKTCRDILAA
YPDSPSGEYWVDPNEGDIKDAVLVHCDMEKKATCILPSPSKSDEIKSYGEKPENWLGDME
GGIKMNYKADSNQMGFLQLLSTGAVQNITYHCKNSVASFDAQGKTFRKGIKLLGWNDAEI
LPKSGNHRLQYETIEDTCRFKKPDWAKTVISYKTDKAIRLPIVDIAIRDIGGPDKSFWVE
IGPVCFQHN
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgggaaaaagtataattttacttttttcattttaattttatttgctattata
ttgctggtcaacaatgttgaagccaaagaaaagagaaagaaaaaaattcatccctctaga
atccatcttgtaaaacctcaagctcaacaaccgccaatagggaatgaaccgccaccacca
ccacaacctccgagaggtaacgaagctccaaatccaaattacgaagaatatgattatgga
gttgattatgattatgattacgatgaaaataaaacaggacctcaacctggagctccaaat
gggaaaaatttaagaattaatttgcttaatgcaacaacacctcctccagtaactactcct
ccattaccaactgaggctcctgataaagaatgtattgttgatggacaagtgagatttcac
aacgaagtatggaaatctgacgaatgtactacttgtcgttgtgataatggtttggtaaac
attccttgctctggaactaaatacacaccctacggagaatgttgtcctgtttgtattcca
tcagaaccggtaactccaactccggaagttaatagaccgacttatccgtatgaaggagat
gctggagcttttgctggaccaagaggagaaactggaccacccggagaaagaggtcgaccg
ggagcaattggaatgccgggtgcacccggtactcccggagttcctggaataccaggaccc
ccaggaccttcaccagatctctcgaatttttacgcacaattggctatgtctcaatcagga
ggtgataaaggacccaatgacgtattaggtagacttccgtttcctcaagaaccattttca
tatcttcaatctcaagttggcccaccgggaccaagaggacctccaggacctcccggtcca
cccggacctcaaggttttcaaggtgtaagaggtgaacccagtgaatctggaccaccagga
ccaccaggaccccctggaccaagaggtttacccggtcttcccggaaaagatggttcacct
ggagaagatggagagcctggtatggcaggagcagcaggtcctccaggttctagaggtctt
cccggaatgccaggattgcccggtataaaaggacacagaggtttcccaggtttagacggt
gccaaaggagaacaaggacccggtggagaaaaaggaagtcaaggatcggctggtccagta
ggacccgtcggaccaatgggaccaactggacccagaggtgaacgtggccgagaaggtcca
ccaggaccaccaggtttaagaggaattgacggtattgctgggcctccaggacaaccaggt
gcaattggtaaaccaggagctccaggttttccaggaaatccaggaaataaaggagatcaa
ggagcaacaggacccaaaggttctcaaggattacaaggaccacgaggagaatcaggaaga
ccaggacaacctggagaaaacggtcaaccaggtccaagtggaaaagacggaagccaagga
gaaaaaggaagccccggtgctgctggtcttcctggaccaccaggatttccaggtgcaaga
ggagctccaggattatctggtagccctggacaacctggagtaaaaggcgctcccggaatg
cctggtgaaagaggacttaaaggagaacaaggaatgaaaggtgaagctggatcaccaggg
cctagaggtattcctggtacttccggttctgaaggaaaacgtggtaaaagaggtttaaga
ggacctacaggtttagctggaactcaaggagaaagaggaacacctggaccacgaggattg
cctggacctgatggagctattggaccaaaaggacaaagtggtgaccgtggacctcccggt
ccgcagggacccaaaggtaacactggtgaaccaggaagacctggaccacccggacttcaa
ggtttaagaggattagttggacgtcctgggcctgccggtaaaactggtccaccaggagat
agaggtatcgaaggagctgatggaaaacccggtgaacaaggaccccaaggtattcaaggt
ttaccaggacctattggtttgcccggagaaaaaggattaactggtgaacccggtaaagat
ggagaacctggaccacaagggccagttggaccaagaggagatgctggtaaagacggttcc
cctggagctcaaggaccacaaggaccgccgggagctcctggagagagaggagctagtgga
ccaccaggatcaactggattccaaggtttaccaggagccccaggtactcctggaacacca
ggaaaagatggagaaatgggtttacaaggacctcctggacccataggtgcacccggtaac
agaggagaaagaggatttcccggagaacgaggatcggtaggtccacaaggtagtcctggt
gccagaggtgaaaccggagcacaaggagtagacggacttccaggattacccggagaaaaa
ggatctaaaggacacgtgggaccacccggacttgtgggtttgccaggaggcagaggtctt
ccaggacaaccaggagaaaaaggagaacgtggatcatctggaccaataggacctgaagga
ccatctggaagacaaggagatcgaggacctcaaggaccacttggacctccgggaccacct
ggagaacccgctgaaagaggagatcctggtccaccaggacttcccggagaacctggagcc
gctggaactccaggagaaagaggacctgttggtcaacagggtattcaaggattccccgga
ttacaaggaccagctggaagtccaggagccaagggagaaagaggatcaaacggagctaaa
ggagaacaaggaagtcccggtcttgcaggtaagcctggagatcccggtgtagcaggatta
acaggattaccaggaccaaaaggaattagaggagaacccggaccaagaggagaagttggt
ttgatgggaccaatgggaagacccggagaacctggaactgctggtcatacaggaccacca
ggtccagctggtgcccctggtattcctggaagtaaaggttcatctggtgacaccggaaga
ccgggagctccaggacccattggacaccctggtgctccaggacctgaaggctctaaagga
gaacaaggacaacaaggaagccctggattaataggacagccaggaccccaaggacctccg
ggagatagaggattgccaggattgccgggagcagcaggtgccccaggtagcagaggagtt
agaggagcgccgggtgaatcaggattgccaggaaaaccaggtaatgaaggacaacaagga
ccacaaggtatagcagggccacctggtcctcctggagctccaggagaacaaggtgttgaa
ggacatgctggaaaaccaggacctccaggtatagcaggtcgtacaggagacaaaggaccg
gttgggccagcagggcctatgggtccaccaggtgcacctggtcaacaaggatcccctggt
ttagttggagccccaggaccagcaggtgaaagaggacctagaggagaagttggacctcaa
ggagcagatgggcccgtgggtccacgtggtagcccaggagttcctggagaacaaggagtt
aaaggagatcaaggatcagaaggtcctaaaggttccaagggtcatcgaggtttgattggt
ttgcaaggtcttccaggtccgcaaggtccaccaggagaaaaaggtttgacaggaagtccc
ggattcccaggaaaagatggagaagtaggtcccaaaggacctcctggaagagatggaaac
ccaggaattgccggattgcaaggacctcctggagtaagaggtgctcctggagatgaaggt
aaatctggacctcctggcccacctggacctccaggaccgccaggaccacccggagactca
ttagcatacgacgcagccactttggcagcattaatgggacaacaaggctctcaagttaag
ggacctgatcctttgagcggagacgaaccaccaagaatgttcggtgacatttccgatgaa
gagagaagaaacttggttttgaaagcttatgaacacttaaaaacaacatttgaaaggttt
aaaaaaccagacggcaaaaagaattatccaggtaaaacgtgtcgagacattttggctgct
tatcctgattcaccatctggcgaatactgggtagatcctaatgaaggagacataaaagat
gctgttttggtccattgtgatatggaaaagaaagccacttgcattcttccgagtccatct
aaatcagacgaaatcaaatcttatggtgaaaaaccagaaaactggttgggagacatggaa
ggcggtattaaaatgaattacaaagcggacagtaatcaaatgggattccttcaattactt
tccaccggtgccgttcaaaatataacataccattgtaaaaattcagtggcttcattcgat
gcacagggtaaaacatttagaaaaggaataaaacttttaggatggaacgatgccgaaata
ttacccaaatccggtaaccacagattacaatacgaaactattgaagacacgtgcaggttt
aagaaaccggattgggccaaaaccgtcatttcgtataaaacggataaagctattcgactt
cccatcgtcgatatcgccattcgagatatcggaggtccggataaatcattttgggtggaa
atcggtccagtttgttttcaacacaattaa
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integrated database retrieval system
