Pediculus humanus corporis (human body louse): Phum_PHUM411920
Help
Entry
Phum_PHUM411920 CDS
T01223
Name
(RefSeq) transcription elongation factor SPT5, putative
KO
K15172
transcription elongation factor SPT5
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Phum_PHUM411920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phu03021
]
Phum_PHUM411920
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM411920
Transcription machinery [BR:
phu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Phum_PHUM411920
RNA polymerase I system
Phum_PHUM411920
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Phum_PHUM411920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW7_SPT5
KOW6_SPT5
KOW
KOW2_Spt5
Spt5-NGN
KOWx_SPT5
KOW5_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
SH3_KIN17_C
DUF3912
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
8234280
NCBI-ProteinID:
XP_002428957
UniProt:
E0VS63
LinkDB
All DBs
AA seq
1122 aa
AA seq
DB search
MSDSEGEGSNYGSEAGSERLSSAGSGDEGSEGPRNSVRSEDEGSRSPSRSHSRSRSRSGS
RSRSRSPSATRDDEAEEAGPGEEEVEDEQEPEGEDLNSEEEYDEEEDEEDDDDDRARKKK
KKDRFGGFIIDEAEVDDEVEDEDEWEDGAQEIGIVSNDLDELGPTAREIEGRRRGTSLWE
SRREDEIEEYLRNKYAEEAIATRHFGDGGEEMSDEITQQTLLPGVKDPNLWMVRCRIGEE
KITALSLMRKFIAFQMTDEPLQIKSVVAPEGIKGYIYIEAFKQPHVKAAINNIGNLRMGA
WKQQMVPIKEMTDVLRVVKEQTGLKKKQWVRLKRGHYKDDIAQVDYVDLAQNQVHLKLLP
RIDYSRLRGALRTQQSENEALKRKRKRRPPAKPFDPEAIRAVGGEVTSDGDFLIFEGNRY
SRKGFLYKNFTMSAIVADGVKPSLSELEKFEEAPEGIDIELPTTNTLKDDSTSHSFSTGD
NVIVCEGELKHLQGKIISIDGNLIMVQPKHEVLKDPIEFPANELEKHFRRGDHVKVLSGR
YEGDTGLIVRIEENRAVLFSDLTMHELEVLPRDLQLCSDMATGVDSMGQFQWGDLVQLDP
QTVGVIVRLERDNFHVLSMHGKVVQAKPQALQKKKELRRAVALDSEENNIQVKDIVDVID
GLHSGRSGEIKHLYRRFAFLHSRMYIDNGGIFVCKTRHLQLAGGNRSNPMAPLGNQSPFH
GGFMSPRIAASPRHHAGGGGGGGGGGGDRGRGGRMKNRFGVRRDRDIIGQTIKITGGPYK
GNVGIVKDATDCTARVELHSSCQTISVDRSHIASIGVPSKDGSISTYNRTPSFGGATPMY
AAGQKTPMHGPQTPMYEPGSRTPYGSMTPSHDGSRTPGQSGAWDANVANTPARSNDFEVY
SLDEASPSPGYNPSTPGYQAGGPYTPQTPGGTMYGSDHSYSPYQPSPSPSGFQGGSYSST
PSPSGGYTPSPSGAPLYATPSLQYSPMTPGSGSAPSPYNPHTPGAGLDTPVQDWQTTDIE
VRIRDTHDDPGLSGQTGIIRSITGGTCSVYLPDEERVVNIIGDHLEPVIPQRGDQVKVIM
GEFREAVGQLLSIDNQEGVVKLNQDQVQMLQLRFLCKMKPSM
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattccgaaggtgagggaagtaattatggaagtgaggctggaagtgaaaggtta
agcagtgctggtagtggagacgaaggttcagaaggaccgagaaattcagtaagatcagaa
gatgaaggatcgagatccccatctagatctcactctagatcaaggtctagatcaggatct
agatctagatctagatctccatctgctactagggatgatgaagcagaagaagcaggacct
ggcgaagaagaagttgaagatgagcaagaacctgagggagaagatttaaattctgaagaa
gaatatgatgaagaagaagatgaggaagatgatgatgacgatagagcaagaaaaaagaaa
aaaaaagatcgtttcggtggttttattattgacgaagctgaagttgatgatgaagtcgaa
gatgaagacgaatgggaagatggtgctcaagaaattggaatagttagtaatgatttggat
gaattaggtccaactgcaagagaaatcgaaggaagaagaagaggaactagtttatgggaa
tcaagacgagaggatgaaatagaagaatatttgagaaacaaatatgctgaggaagccatt
gctacaaggcactttggcgatggaggagaagaaatgtctgatgaaattacacaacaaact
ctcttgccaggagtgaaagatccaaatttatggatggtgagatgtcgaataggagaagaa
aaaataactgctctctctctcatgagaaaatttattgcctttcaaatgactgatgagcct
cttcaaataaaatcagtcgttgctccagagggtataaaaggatatatttacatagaagct
tttaaacaaccacatgtgaaagcagccataaataacattggtaaccttcgtatgggtgca
tggaagcagcagatggtaccaattaaagaaatgactgacgtactcagagttgttaaagaa
caaacaggtttgaaaaaaaaacagtgggttcgattaaaacgaggtcattacaaggacgac
attgcccaagtagattatgttgatttagcacaaaatcaagttcatttaaaactattgcct
agaattgattattctagattgagaggagctttgagaacgcagcaaagcgaaaatgaagcg
ttaaagagaaaaagaaagaggagaccacctgcaaaaccttttgatccggaagcgattaga
gccgtaggtggcgaagtgaccagcgatggtgattttttaattttcgaaggaaatcgttac
agtcgaaaaggattcctgtataaaaatttcacaatgagcgccatagtagcagacggagtt
aaaccgagtctgtcggaattggaaaaatttgaagaagctcccgaaggaatcgacattgaa
ctccccacgactaatacgttaaaagatgattccacgtctcattccttttccaccggcgat
aatgttatcgtttgcgaaggagaattaaaacatttacagggtaaaattatttcgatcgat
ggaaacttgattatggttcaacccaagcacgaagttttgaaggatccgatagaatttccg
gccaacgaattggaaaaacattttcgacgtggagatcacgtgaaagttttaagcggaaga
tacgaaggcgacaccgggttaatcgttagaatcgaagaaaatcgggccgttttatttagt
gatttaacaatgcacgagctggaagtattacctcgagatttgcaattatgttccgacatg
gctaccggagttgattccatgggtcaatttcaatggggagacctcgtgcaattagatccg
caaacggtaggagtcatcgtacgtctcgaaagagataatttccacgtgttgagcatgcac
ggaaaggttgtacaagccaaacctcaggcactgcagaaaaaaaaagaattgagacgtgca
gttgctttggattccgaagaaaataacattcaagttaaagacattgttgacgttattgac
ggcttgcattcgggtagaagtggggaaatcaaacatttgtacagacgtttcgctttcctt
cattctcgaatgtacatcgacaacggtggaatatttgtgtgtaaaacgaggcatcttcaa
ttggctggaggaaatcgctcaaatcccatggctcctttgggtaatcaaagtccatttcac
ggtggattcatgtcaccccgtatcgcggcttcacctcgtcatcatgctggtggcggcggc
ggcggtggtggtgggggaggagatagaggaagaggtggacgaatgaaaaatcgttttggc
gttcgaagagatagagatatcataggtcaaaccattaaaattacaggaggtccttacaaa
gggaatgtcggtattgttaaagatgcaacagactgtaccgcaagagttgaattgcattct
agttgtcaaacgatatcggtagatagatctcatatagcaagtatcggcgttccttccaaa
gatggatctatctcgacttacaaccgaactccttccttcggtggagctactcccatgtac
gccgccgggcaaaagactcccatgcacggacctcaaacgccaatgtacgagcctgggtct
cgtactccttatggtagcatgactccgtcgcatgatggatcgcgaactcccggacaatct
ggagcttgggatgccaacgtcgcgaacacgcctgcaagatcgaatgatttcgaagtttat
tctttggatgaagccagtccgagtcccggatacaatccgagtacgcctggatatcaagcc
ggtggtccctacactccgcagacacccggtggcaccatgtacggatctgatcattcttat
tctccctatcaaccgagtcctagtccaagtggatttcaaggaggatcttatagtagcact
ccgagtccgagcggtggttacacgccatctccaagcggagctccgttgtacgctaccccg
tcgttgcagtacagtccaatgactccagggagcggctcggctccaagtccatataatcct
cacactccaggagcaggactcgacactcccgtccaagactggcaaactacggatatcgaa
gtacgaattcgcgatacacacgacgatccgggattgtcgggtcaaacgggaatcattcgt
agtatcaccggcggaacttgttccgtgtatcttccagacgaagaaagggttgtaaatata
atcggagatcatttagagcccgtgatacctcaaagaggggatcaagttaaagtgatcatg
ggagaattcagggaagccgtcggacaattattatcaatcgacaatcaagagggagtcgtt
aagctcaatcaagatcaagttcaaatgttacaattaagatttctatgcaaaatgaagcct
agcatgtaa
DBGET
integrated database retrieval system
