Pediculus humanus corporis (human body louse): Phum_PHUM430790
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Entry
Phum_PHUM430790 CDS
T01223
Name
(RefSeq) collagen alpha-1 precursor, putative
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
Phum_PHUM430790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
phu00536
]
Phum_PHUM430790
Glycosaminoglycan binding proteins [BR:
phu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
Phum_PHUM430790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
DUF6604
Motif
Other DBs
NCBI-GeneID:
8230229
NCBI-ProteinID:
XP_002429374
UniProt:
E0VTD0
LinkDB
All DBs
AA seq
1727 aa
AA seq
DB search
MAERNKKKKKHGVVDLLFETKAHEEPLGVSQIEGLCLSRPGNDTEDKAYRLSERALLTVN
SIQIFPKGFPTDFSIILVVKPDPDTSVSTLFTVYSDTGDDQLAVSLGKDVILFLQDEETK
PQTQNVISFGVGINDGKWHRLGFSVKGDAATLILDCEKQITKVLNREPFSKISVAGIFLI
GQQLLDEGFFKGDLQTLMISSTPDAAYEICTEYCPPCDQPFKYVQPKLNLPEVIHGKQQG
KKKKKHFQALESQYTSLDGNLIRINEDFDEDDYEEGNDDDEDENQTKENLSFVVPDINII
SVTRQPSYDNNTEPFESENVLTYNSKQPFEVGVEAHYVRGPPGPRGYPGIPGLPGLPGPK
GERGRDGMVGNIGIPGPPGHVFMIPLSSSSTDKGPDSQAEHMRHLLSQHMVAMRGVDGPM
GITGVPGPQGPPGPEGLKGEPGEVGEPGPRGLRGMMGPPGREGRRGRPGRDGERGMTGPP
GTKGEQGLPGLPGLPGEKGERGLSGAPGQPGMTGHEGMQGDDGPPGLPGLPGELGPRGFP
GPRGFPGLPGSPGVPGGEGPPGAKGASGPPGQPGNPGQPGPPGAIGPPGPQGPLGPPGLP
GSPGKSGLPGLPGAEGAPGHPGSQGNSGPKGDTGPVGPQGPVGFPGTRGVKGDEGKRGPS
GEKGEKGDRGPDGEKGDLGMKGDRGVPGPAGATGLEGPEGPKGFEGPRGETGPPGPQGEK
GKIGSPGFAGYPGAPGEKGDKGTEGRIGQPGEKGDRGNQGQPGERGETGPRGFRGARGRR
GSEGTPGPKGDTGQPGPPGPQGERGPQGPDGARGFPGPQGAPGSNGKDGPPGGPGERGAP
GEPGPQGPSGAPGVVGSPGPAGEPGPIGEPGAPGHPGLPGEPGDPGEMGKEGPTGPAGPV
GKPGPPGPPGAPGFPGERGHPGLPGTSGLKGEMGPAGPMGPTGDKGQQGEPGKDGPPGPE
GRQGSPGSHGAPGTKGDRGEPGIAGATGRDGLPGLRGLPGPPGPIGPPGEDGDKGDVGAP
GEKGFKGAKGEMGPPGSQGTQGIRGEPGALGLPGEKGPPGEMGRQGAKGEDGPPGVSGPP
GAPGPQGLPGPPGVKGEIGDVGAKGPLGPAGLPGEQGPRGTKGGEGPTGPPGPEGLQGPK
GEPGNPGLPGPPGLDGKHGEVGPPGPKGEEGKSGPQGSPGPRGPAGVEGAKGNPGPPGFP
GPAGEPGIPGPKGEAGLDGSEGKPGDTGPPGEAGLPGKPGEPGPPGKVGPEGPAGIQGSP
GPPGEKGDGGPVGPMGPQGLIGPQGLPGLRGPPGPVGSPGNAGDVGPPGKTGAEGPPGKN
GERGLKGMKGDRGRRGSKGHRGEMGLPGIKGDMGEKGERGLLGMQGVEGKKGEIGPPGPP
GPKGNDGPPGMPGVEGPPGAKGSQGVAGMKGEPGKPGLPGPPGPPGEFPLLPPELLFQTG
TETESHFKADSRRRRDIETELLELEELIKEEERATATSTSKPGTNTNKKSKQNNEDNGKF
LDMYSSIYTMRQDLERIRKPLGTRDNPVRTCKDLFYGHPHFKDDWYWIDPNLGMTDDAVY
VFCNITGQGETCVFPDIHSRQMPNIPWRKEGEKTDWYSNLRGGFRITYETIGVVQMTFLR
LLSQEAYQNFTYTCINAAAWHNQKGDNYNFSIRLLGENEVEFGYNEIKPIILADGCKTRK
SKTETIFQIKTKNLEQLPIIDFYPVDYGLPNQAFGFHVGPRLVDMHT
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacgaaataaaaagaaaaaaaaacatggcgtcgtagatctccttttcgaaaca
aaagcacacgaagaacctctgggtgtttctcagatagaaggtctttgtctgtctagacct
ggaaacgatacagaagacaaagcttacagattaagcgaaagagctttactaacggttaat
tcaatacaaatttttccgaaaggttttccaacggatttttcaataatactcgtagtaaaa
cccgatccagatacaagcgtatcaaccctatttaccgtgtatagtgacacaggagatgat
caattagctgtttcattgggaaaagatgttattttatttttacaagatgaagaaacaaaa
ccacaaactcaaaatgttataagttttggagtcggaataaacgatggaaaatggcacaga
ttgggattcagcgttaaaggagatgctgcgacactcatattggattgtgaaaaacaaata
acaaaagttttaaatcgggaaccattttctaaaataagcgtcgctggaatatttttaatc
ggacaacaattattagacgaaggattttttaagggagacttacaaacgttaatgatctca
tcaacacccgatgccgcttatgaaatatgtaccgaatattgtccaccgtgcgatcaacca
ttcaaatacgttcaaccgaaattaaatttaccagaagtcattcatggtaagcaacagggt
aaaaagaaaaaaaaacattttcaagcattggaaagtcaatacacatcactcgatggaaat
ttaatacgaattaatgaagatttcgatgaagatgattacgaagagggaaacgatgatgac
gaagatgaaaatcaaacgaaagaaaatttaagttttgtcgtaccggatatcaatataata
tccgttacaaggcagccatcttacgataataacacggaaccttttgaaagtgaaaacgtt
cttacctacaattcaaaacaaccttttgaagtcggtgtggaagctcattatgttagaggt
cctcctggtcctagaggttatcctggaataccgggtttgccaggtcttcccggacccaaa
ggagaaagaggaagagatggtatggttggaaatattggtatacccggtcccccagggcac
gtgtttatgattcccttgagttcgtccagtacagacaaaggaccggatagtcaagctgaa
catatgagacatttgctttcacaacatatggttgcaatgagaggtgtagatggtccaatg
ggaatcacaggagttccgggacctcaaggtcctccaggtcctgaaggtttaaaaggtgaa
cccggcgaagttggagaaccgggtccgcgaggtttgcgaggtatgatgggtccacctggt
agagaaggtagaagaggaagacctgggagagatggtgaaagaggaatgacaggtccacca
ggaacaaaaggagaacaaggacttcccggattaccaggtttgcccggagaaaaaggagaa
agaggattatctggtgcacccggacaacctggaatgaccggacatgaaggaatgcaagga
gatgatggaccaccgggattgccaggtttaccaggagaacttggtccgagaggatttcca
ggtccaagaggttttcctggattgccaggttcaccaggtgttcctggaggagaagggcca
ccgggtgcaaaaggagcaagtggaccacccgggcaaccaggaaatccaggccaaccgggg
cctccgggtgctataggaccaccaggcccgcaaggaccattaggtcctcccggattaccg
ggctcaccgggaaaatcaggtttacccggtcttccaggagctgaaggagctcctggacat
cccggaagtcaaggtaattccggtccgaaaggtgatactggaccggttggacctcaagga
ccggtcggatttcccggaacgagaggagttaaaggagacgaagggaaaagagggccttcc
ggggaaaagggagaaaaaggcgatagaggaccagatggagaaaaaggagatttaggaatg
aaaggagatcgtggggtaccaggtcctgccggtgcgactggattagaaggacctgaagga
ccaaagggtttcgaaggtcctagaggtgaaactggaccccctggtcctcaaggtgaaaaa
ggaaaaataggatccccgggttttgcaggttatccaggagcaccaggagaaaaaggagat
aaaggtacagaaggtagaatcggtcagccgggagaaaaaggagacagaggaaatcaagga
caacctggagaaagaggagaaacgggaccgagaggttttcgaggagctagaggaagacga
ggttcagaagggacacctggtcctaaaggtgatacaggacagcccggaccacctggtcct
cagggtgaaagaggaccacagggacccgatggagcaagaggatttcctggtccgcaagga
gctcctggtagcaacggaaaagacggtccacctggaggccctggtgaaagaggagctcca
ggtgaaccaggaccgcaagggccgtcaggagcgccaggcgttgttggttctccaggtccc
gcaggagaacctggaccgataggagagcccggagcaccaggacatcctggattgcccgga
gaacctggagatcctggtgaaatgggtaaagagggaccaactggaccggccggacctgtt
ggaaaaccaggtcctccgggaccacctggtgcacctggttttccaggagaaagaggacat
ccaggtcttccaggaacgtcaggactgaaaggtgaaatgggacctgcgggacctatgggc
cctacaggagacaaaggtcaacaaggagaaccaggtaaagacggtccaccagggccagaa
ggccgacaaggctctccaggatcacacggagcacctggaactaaaggagacaggggagaa
ccaggtattgcaggagctacgggaagagacggactgcctggcttaagaggattacctggt
ccaccaggtccaattggacctcctggtgaggatggtgataaaggtgatgtaggagcacca
ggagaaaaaggatttaaaggtgcaaaaggagaaatgggtcctccaggatctcaaggaaca
caaggtattagaggtgaaccaggagcattgggtttaccgggagaaaaaggacctcctgga
gaaatgggaagacagggtgcaaaaggagaagatggtcctccaggcgtttctggtccacca
ggagctcctggccctcaaggattaccaggtccaccgggtgtaaaaggtgaaataggagat
gtaggagcgaaaggacctttgggacctgctggattacccggagaacagggtcctagagga
acaaaaggaggagaaggtcctactgggccacccggtccggaaggattacaaggaccaaaa
ggtgaacccggaaacccaggtctcccaggcccacctggattggatggaaaacatggtgaa
gttggacctcccgggccaaaaggagaagaaggaaaatccggaccgcaaggatctccagga
ccaagaggacctgcaggagtagaaggagctaaaggaaatccaggtcctcctggatttccc
ggaccagcgggagaacctggaattcctggaccaaaaggggaggcaggactggatggtagt
gaaggtaaaccaggagatacaggtcctccgggagaagcaggattaccaggcaaacctgga
gaaccaggacctcctggtaaagttggtcctgaagggccagccggtattcaaggaagtcca
ggacccccaggagaaaaaggagatggaggacccgttggaccgatgggaccgcaaggatta
ataggaccgcaaggtttgccaggcctacgaggacctcctgggcctgtaggctctccagga
aatgctggagacgtaggacctccaggaaaaacgggtgcagaaggtccacccggtaaaaat
ggtgaaagaggattaaagggtatgaaaggggatagaggtagaagaggttctaaaggtcat
cgcggtgaaatgggattgcctggcattaaaggtgacatgggggaaaaaggtgagagagga
ctattaggaatgcaaggagtagaaggaaagaaaggagaaatcggaccgccaggtccgccg
ggtcccaagggtaacgacggtccacctggaatgccaggagttgaaggaccgccgggagct
aaaggttcacaaggagttgcaggaatgaaaggagaaccaggaaaaccaggattaccaggt
cctccaggtccaccgggtgaatttccattactacctccagaattactttttcaaacgggt
accgaaacagaaagtcattttaaagcagattctcgaaggaggagagacatagaaactgaa
ttattagaactcgaagaactaataaaagaagaagaaagagcaacggccacctcaacatcc
aaacccggtacaaacacgaataaaaaatcaaaacaaaacaacgaagacaatggaaaattt
ttagacatgtacagctccatttacacgatgagacaagatttagaaaggataagaaaacct
ttgggaactcgcgacaatcctgttcgaacctgcaaagatttattttacggccatcctcat
tttaaagacgattggtattggatagaccctaatttaggaatgacagatgatgcagtttat
gttttttgtaacataacgggccaaggtgaaacttgcgtttttccagacatacattctcgt
caaatgccaaacattccttggagaaaagaaggtgaaaaaacggattggtattcgaacctg
agaggaggatttaggataacttacgaaacgatcggagtcgtacaaatgacttttctaaga
ttattaagtcaagaagcttatcagaatttcacatacacgtgtataaatgcagcagcctgg
cacaatcaaaaaggtgacaattacaacttttcaatacgactattaggagaaaacgaagtc
gaatttggttacaacgaaataaaacctataatattagcagacggttgcaagacgagaaaa
agtaaaacggaaacaattttccaaataaaaactaaaaatttagaacaacttccgataatt
gatttttatccggtcgattacggtctaccaaatcaagcattcggttttcacgtgggtccc
agactagtagacatgcatacgtga
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