Pediculus humanus corporis (human body louse): Phum_PHUM453000
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Entry
Phum_PHUM453000 CDS
T01223
Name
(RefSeq) DNA polymerase delta catalytic subunit, putative
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03030
DNA replication
phu03410
Base excision repair
phu03420
Nucleotide excision repair
phu03430
Mismatch repair
phu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Phum_PHUM453000
03410 Base excision repair
Phum_PHUM453000
03420 Nucleotide excision repair
Phum_PHUM453000
03430 Mismatch repair
Phum_PHUM453000
03440 Homologous recombination
Phum_PHUM453000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phu03032
]
Phum_PHUM453000
03400 DNA repair and recombination proteins [BR:
phu03400
]
Phum_PHUM453000
Enzymes [BR:
phu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Phum_PHUM453000
DNA replication proteins [BR:
phu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
Phum_PHUM453000
DNA repair and recombination proteins [BR:
phu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
Phum_PHUM453000
MMR (mismatch excision repair)
DNA polymerase delta complex
Phum_PHUM453000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
divDNApol
REV3_N
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
8230510
NCBI-ProteinID:
XP_002429857
UniProt:
E0VUR3
LinkDB
All DBs
AA seq
1096 aa
AA seq
DB search
MSQNKRKNFSENHNKFLKRSKSGEDNGYSGSFESDLAAMELTENDFLTEDTPEIGVGPDT
EQTSVRWCRPPLPKFNPDKESLIFQQIEIDHYHGSPIPGMPGYQVSPSSIMRMYGVTMEG
NSVCCHVHGFAPYFYVSVPSDFTEDHCKPFKKALNDVVMNDIRSNRENIKEAILDVELVF
KQNMFGYEGDKKNKFLKVTIILPKLAAACKRLMDKETVYKAFGGYYYQFFESNIDFDIRF
MVDTDVVGCSWIELPPGTWKIRMKDSNHDYPITSRCQLEVDVGWNQFIAHAPEGEWSKVA
PFRILSFDIECAGRKGIFPEPNHDPVIQIANMVLKQGQSEPFIRNIFTLNSCAPIVGSQV
LCFDKETELLKSWGEFVRQVDPDICTGYNISNFDFPYLINRAKHLNVNDFCFLGRIKDIK
SVVKDSVLQSKQLGRRENKNTNIEGRVTFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKED
VHHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLIEKLMCFINYMEMARVTGVPLSCLLT
RGQQIKVVSQLLRKTKEKHYLMPTHNSVGSDEQFEGATVIEPKKGYYPDPIATLDFSSLY
PSIMMAHNLCYTTLLRPGVKEKLNLEPDKYSTTPSNHFFVKKSIRKGLLPEILENLLTAR
KKAKTDLKNETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTSYGRSM
IEQTKQEVEMKYNIANGYKHDSEVIYGDTDSVMIKFGNKTLEECMELGREAAVYVSSKFI
SPIKLEFEKVYFPYLLISKKRYAGLYFTKTDTYDKMDCKGLETVRRDNSPLVANMITTCL
QKILINRNPDEAVNYAKKVISDLLCNKIDISQLVITKELTKNDYAAKQAHVELAQKMKKR
DPGTAPKLGDRVPYVICCATKGTPAYCRAEDPIYVLENSVPIDFNYYLENQISKPLLRIF
EPILGEKAESILLRGDHTRTKAMVTSKVGALFAFTKKKESCLGCKSVLNENEGSNALCKH
CKPNAIALYLNHLNKYKTYESQFSRLWTECQRCQGSLHEEVICTSRDCPIFYMRKKIQMD
LQTQDQVMERFRNFSW
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaataaaagaaaaaatttttctgaaaatcataacaagtttctaaaacgatca
aagtcaggggaggataatgggtattcaggatcttttgaaagtgatttagctgctatggag
cttacagaaaatgatttcttgacggaggatactcctgaaataggtgttgggccagacaca
gaacaaaccagtgttagatggtgtagacctccactaccaaagtttaatcctgataaagaa
tcattaatttttcaacaaatcgaaattgaccattatcatggttccccgattcctggtatg
cctggatatcaggtatctccatcatcaatcatgagaatgtatggtgtcactatggaaggg
aattcagtatgttgtcatgttcatggttttgcaccttacttttatgtttctgtaccatct
gattttactgaagatcattgtaaaccttttaagaaagctttaaatgatgttgtaatgaat
gatatcaggtcgaatagagaaaacattaaagaagcaatattagatgttgaattagttttt
aaacaaaacatgtttggttatgaaggagataaaaaaaacaaatttttaaaagtaacaatt
atactgccaaaattagcagcagcatgtaaacgtttaatggataaagaaactgtttataaa
gcttttggaggttattattaccaattttttgaatctaatatagatttcgacattagattt
atggttgatactgatgttgtcggatgctcctggatagaacttcctccgggaacatggaaa
ataagaatgaaagacagtaaccatgattatccgattacttcaagatgccagttagaagtt
gatgtaggttggaatcaatttatcgctcatgctcctgagggagaatggagtaaagtagca
ccttttagaattttaagtttcgatattgaatgtgctggacggaaaggtatatttccagaa
ccaaatcatgatccagttatacaaatagctaatatggttttaaaacaaggacagtctgag
ccttttattaggaatatatttacattaaattcttgtgctccaattgttggttctcaagtt
ttatgttttgataaagaaacggaactactcaaaagttggggagaatttgttagacaagtt
gatcctgatatttgcactggttacaacataagcaattttgattttccttatttaattaat
agagcaaaacatttaaatgtaaatgatttttgttttctcggcagaatcaaagacattaaa
tccgttgttaaagattccgttttgcaaagtaagcaactcggacggagagaaaataaaaat
acaaatattgaaggaagagtgacatttgatttattactcgttcttgttcgtgattacaaa
cttcgttcatacactttaaatgccgtgagttaccattttttgcaagagcaaaaggaagat
gtacatcatagcatcataaccgatttacaaaatggaaacgaacaaacaaggagaagactg
gctgtttattgtttgaaagatgcttatttgcctcttagactaattgaaaaattaatgtgt
tttattaattatatggaaatggctagagtaacgggtgttcctttatcatgtttgctgaca
cgagggcagcaaattaaagtcgtatctcaacttctcagaaagaccaaagaaaaacattat
ttaatgccgacacacaacagcgttggatctgacgaacaatttgagggtgcaacagttata
gaacccaaaaaaggttattatccggatccgatcgcaactttggatttcagttctttgtat
ccgagcataatgatggctcataatttgtgttacacaactttacttcgacccggggttaaa
gaaaaattaaatttggaacctgataagtattctaccactccgtccaatcattttttcgtc
aaaaaatcaattcgaaaaggattgttgccggaaattttggaaaatttactaacggcgagg
aaaaaagcaaaaacagatttgaaaaacgaaacggatccatttaaaaaacaagttttggac
ggaagacaattggctcttaaaataagtgcaaattccgtgtacggattcactggagcacaa
gtagggaaattaccctgtttagaaatatctggtagcgttacctcttacggacggtcaatg
attgaacaaacaaaacaagaagttgaaatgaagtataacatagcaaacggttacaaacac
gattccgaagttatttacggagatacggattctgtcatgattaaattcgggaataaaaca
ttggaggaatgtatggagttgggaagggaagcggctgtttacgtgtcttcgaagtttatc
agtccaattaaactcgaattcgaaaaagtttattttccgtatttgttgataagcaaaaaa
cgttacgccggattatatttcacaaaaaccgatacctacgataaaatggattgtaaagga
ttggaaaccgtgagaagagataattctccattagtggctaacatgataacgacgtgccta
caaaaaattctcatcaacaggaatcccgatgaagctgtcaattacgccaaaaaagtcatt
tccgatcttctgtgcaacaaaattgatatatcacagttggtcataactaaagaactgacg
aaaaacgattatgcagccaaacaagctcacgtggaactagcacaaaaaatgaaaaaaaga
gatccgggtaccgcgccaaaattgggagatagagttccgtacgtgatttgttgtgccacg
aaaggaactcccgcctactgcagggcagaagatccgatatacgttttggaaaatagcgtg
cccatcgattttaattattatttggagaatcaaatttcaaaacccttgctcagaatattc
gaaccgattcttggagaaaaagccgaatcgattttattacgtggtgatcacacgaggacg
aaagcgatggtcacgtccaaggttggtgctttgttcgcgttcacgaaaaaaaaggaatcc
tgtttgggatgcaaatcggtactgaacgaaaacgaagggagtaacgcactgtgcaaacac
tgcaaaccaaatgccatagctttgtatttgaatcatttgaacaagtacaaaacatacgaa
agtcaattcagtcgtttatggacagaatgtcaaagatgccagggtagcttacacgaagaa
gttatatgcactagtcgagattgtcctattttttacatgagaaaaaaaattcaaatggat
ttacaaactcaagatcaagttatggaaagatttagaaatttctcttggtaa
DBGET
integrated database retrieval system
