Pediculus humanus corporis (human body louse): Phum_PHUM457930
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Entry
Phum_PHUM457930 CDS
T01223
Name
(RefSeq) U520, putative
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Phum_PHUM457930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phu03041
]
Phum_PHUM457930
Enzymes [BR:
phu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Phum_PHUM457930
Spliceosome [BR:
phu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
Phum_PHUM457930
Complex C
U5 SnRNP specific factors
Phum_PHUM457930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_30
AAA_22
DEXQc_Suv3
nSTAND3
SWI2_SNF2
DrmE_N
Motif
Other DBs
NCBI-GeneID:
8230679
NCBI-ProteinID:
XP_002429968
UniProt:
E0VV24
LinkDB
All DBs
AA seq
2114 aa
AA seq
DB search
MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVMSLVGKLDGTRMGDRFQRSK
PVKAEERKAKRQKRDEAQYDFARMKGATLLSEGVDEMVGIIYRPKTQETRQTYEVLLSFI
QEALGDQPRDILCGAADEILQVLKNDRLKEREKKKETELLLGSVADERFALLVNLGKKIT
DFGSEEKTKEIIDEANIDETYGINVQFEESEEESNEDVFGEVREDEDLEEEGEDSKVDSA
IRAENLGVTEEMKKEKSLHPLDIDAYWLQRCLSKIYDDAMISQAKAAEVLAVLKNAGDDR
ETENQLVLLLGYNCFDFIKLLKKHRHMISYCTLLASSQSESERQKIRDEMNEIPALARIL
RQLDTGKGEDEVQEESGISRTTRRKEQTDDGKGNIQGSRQIVDLEELTFSQGSHFMANKR
CQLPDGSFRKQRKGYEEVHVPALKPKPFASEESLVPIEKLPKYVQPAFEGFKTLNRIQSR
LYKTALESDENVLLCAPTGAGKTNVALLCMMREIGKHIDHEGNIMGDEFKIIYIAPMRSL
VQEMVGNFNKRLHSYNLVVSELTGDHQLNRQQIQSTHIIVCTPEKWDIITRKGGDKTFTQ
LVRLIIIDEIHLLHDERGPVLEALVARTIRKIEAAQEDVRLVGLSATLPNYQDVATFLRV
KTETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNEIVYEKVMEHAGRNQVLVFVHS
RKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEAEQVKNSELKDLLPYGFAIHHA
GMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGRWVELGAL
DVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQLVGKIPDMLNAEIVL
GTIQTVRDAVTWLGYTYLYIRMLRSPTLYGISHDHLKEDPLLESFRADLIHTAALQLDRS
GLIKYDRKTGHFQVTELGRICSHYYCTHETMAVYNQLLKPTLSEIELFRVFSLSGEFRNI
NVREEEKLELQKLMERVPIPIKENIEEPSAKVNVLLQAYISQLKLEGFALMSDMIYVTQS
AARLMRAIFEIVLFRGWAQLADKCLSLCKMIDRRMWQSMSPLRQFRKMPEEIIKKIEKKN
FPWERLYDLGPNEIGELIRVPKLGKTVHKYVHQFPKLELSTHIQPITRSTLRVELTITPD
FQWDEKLHGSSEAFWILVEDVDSEVILHHEYFLLKSKFASDEHLVKFFVPVFEPLPPQYF
LRIVSDRWIGAETQLPVSFRHLMLPEKNLPSTELLDLQPLPVTALRNSLYESIYSKKFPQ
FNPIQTQVFNAVYNTDDNIFIGAPTGSGKTTIAEFAVLRLLSQNPDGRCVYLVAKDSLAE
LIFAEWQQIFNCILNVKVVLLTGETSTDLKLLAKGQIIITTAEKWDVLSRRWKQRKNVQN
IQLFIVDELQLIGGEDGPVLEVVCSRMRYISSQLEKQIRIVALSTSLADARDVSQWLGCN
SNATFNFHPSVRPVPLELHVQGFNITHNASRLIAMSKPVFNNIMKHSSHKPVIVFVPTRK
QARITAISLLTFAAAESQPNRFFHAEEEDIQPFLERMSDKTLKETLIQGVAYIHEGLTPN
DHRLVEQLFDSGAVQIAVVTRNLCWGLNIQAHLVIIMDTQFYNGKIHAYEDYPVTDVLQM
IGKANRPLEDDDAKCVLMCQSSKKDFFKKFLNESLPVESHLDHRLHDHFNAEIVTKTIEN
KQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVETTLNDLEQSKCISIEDE
MDCMPLNLGMIAAYYYINYTTIELFSLSLNSKTKIRGLLEIISSAAEYEDIPVRHREDTI
LRTLSMKLPNKLNSNTKFNDPHVKTNILLQAHLSRIQLSPDLQRDTEIILGKAVRLIQAC
VDVLSSNGWLAPAVAAMELAQMVTQAMWSKDSYLKQLPHFTSEIIKRCSEKNVETVFDIM
ELEDDDRIKLLQLSDSQMVLLEREDDVSGPVIAPFFPQKREEGWWVVIGDPKTNSLLSIK
RLTLQQKAKVKLDFIAPNPGHHSYTLYFMSDAYLGCDQEYKFSINVGEFESSTKDSTSKH
YNAFKPWKNFDNKL
NT seq
6345 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgctgcagctcgtcagctgcaatacgagtacaaagccaattctaatttagtt
ttacaagccgatgttaggctcattgagagaagaagccgagatgaggctaccggagaggtg
atgtctttagttggaaaactagatgggacacgaatgggtgatcgttttcagagaagcaaa
ccagtaaaagcagaagaaagaaaagcaaagcgtcaaaaacgagatgaagcgcaatatgat
tttgctagaatgaagggagctacccttttatcagaaggtgttgacgaaatggttggtatc
atatacagaccgaaaactcaagaaacgagacaaacttatgaagttttgttgagcttcatt
caagaagctttgggtgatcagcctcgagatatactttgtggagcagcagatgaaatacta
caggtacttaaaaatgacagattaaaagaaagagaaaagaaaaaagagacagaattgctt
cttggaagcgtggctgatgaaagatttgctttattagtaaatctcggtaaaaaaataacc
gattttggttcagaggaaaaaacaaaagaaattatagatgaagcaaatattgatgaaaca
tatggtataaatgtgcaatttgaagaatcagaggaagaaagcaatgaagatgtatttggt
gaagtaagagaagacgaagatttggaagaggaaggagaagattccaaagtagattcagca
ataagagctgaaaatttgggcgtcactgaggaaatgaaaaaagaaaaatcgttacatccc
ttggatatagatgcttattggttacaaagatgtttaagtaaaatttatgatgatgccatg
atatctcaagccaaagcagctgaagttcttgctgttttaaagaatgctggtgatgatagg
gaaactgaaaatcagttagttttgttacttggatataattgctttgattttataaaatta
ctcaaaaaacacaggcacatgatttcatattgtacattgttagcttcatcccaaagtgaa
tctgaaaggcaaaagattcgagacgaaatgaacgaaatcccagctttagctcgaattttg
cgtcagttagataccggtaagggagaggatgaggttcaagaagaaagtggaatttcacgc
actactagacgtaaggagcaaactgatgatggaaaagggaatattcaaggatctcgacaa
atagttgatttagaggaactaacattttcccagggttctcattttatggctaataaaaga
tgtcaacttcctgacgggtcatttagaaagcaaagaaagggttatgaagaagtgcatgtt
cctgccttaaaaccaaagccatttgcttcagaagaatcgctagtaccaattgaaaagttg
cccaaatacgttcaacctgcttttgaagggtttaaaaccttgaatagaattcaaagccga
ttgtataaaactgctttggaatctgatgaaaacgtacttttatgtgctcctacaggggca
ggtaaaacaaatgtggctcttttatgtatgatgagagaaattggaaaacacattgatcac
gaggggaatattatgggagacgaatttaaaataatttacatagcacccatgagatctttg
gttcaagaaatggttggaaacttcaataaaagattacattcctataatttagtggtgtca
gaattgacaggagatcaccaattgaacagacagcaaattcaaagtactcacattattgtt
tgcactcctgaaaaatgggatataataactcgcaaaggaggagataaaacgtttactcaa
ttggttcgtctaattataattgatgaaattcatctgcttcatgatgaaagaggtccagtt
ttagaagcactagttgccagaactataagaaaaatagaggccgcacaggaagatgttaga
ttagtgggattatctgccactttgccaaattatcaagatgtagcaacatttttacgagtc
aaaacagaaactgggcttttttactttgacaatagttttcgtcctgtagctcttgagcag
cagtatattggagtaactgaaaaaaaagctttaaaaagatttcaagtaatgaatgaaata
gtttacgaaaaagtaatggaacatgccggtagaaatcaagttttggtttttgtacattca
agaaaagaaacagggaaaactgctagagctattagagatatgtgtttagaaaaagacact
ttgggtcaatttttaagagaaggttcggcttcgatggaagttttgagaacggaagcggaa
caagtgaaaaattcagaattaaaagatttattgccgtatgggtttgctattcatcatgca
ggaatgactagagtcgatagaactttggtagaggatttgtttgctgacagacatattcaa
gttctcgtttcaacagctacattggcttggggtgtaaatttaccggctcatactgtgatt
ataaaaggaacacaagtttacaatcctgaaaaaggacgatgggttgaacttggagcgttg
gatgttttgcaaatgttgggtagagcaggtcgtccacagtatgataccaaaggagaaggt
atattaattacaaatcatagtgaacttcaatattacttgtcacttcttaatcaacaacta
cctattgaatcacaattggtgggaaaaatacctgacatgttaaacgcagaaattgtatta
ggcacaatccaaactgtcagagatgcagtaacatggctaggttatacctatctttacata
aggatgttgagatctccaactttgtatggaatctctcatgatcatttaaaagaagatcca
ctgcttgaatctttcagagcagatttaattcacaccgctgctcttcaattagatcgaagt
ggtttaattaaatatgatagaaaaactggacattttcaagtcacggaactcggccgaatt
tgtagtcattactattgtactcacgagacaatggctgtgtataatcaacttttgaaacca
actttaagcgaaattgaattattcagagttttttctttgtctggcgaatttagaaacatt
aatgtaagagaagaagaaaaactagagcttcaaaaactcatggaaagagtaccgatacct
ataaaagaaaatattgaagagcctagtgctaaagttaatgttttacttcaagcatatatt
tctcagttaaagttagagggctttgctttaatgtccgatatgatttatgtaactcaatcg
gctgccagacttatgcgagctatatttgaaattgtattatttcgtggttgggctcaactt
gctgataaatgtttgtcactttgcaaaatgatcgatagacgaatgtggcaatcaatgtca
cctcttcgtcaatttcgaaaaatgcctgaagaaattattaaaaaaattgaaaagaaaaat
tttccctgggaaagattgtacgacttgggtcccaacgaaatcggagaattgataagagtt
ccgaaacttggtaaaacggttcataaatatgttcatcaatttcctaagttagaattatct
actcatattcagccaatcactagatctacccttagagtagaacttaccattacacctgat
tttcagtgggatgaaaaactccatggctcttctgaagctttttggatattagttgaagac
gtagattccgaagttattcttcaccatgaatattttcttcttaaatcaaaatttgcgagc
gatgagcatcttgtaaagtttttcgttccggtatttgaacccttacctcctcaatatttt
ctgaggattgtttccgatcgctggatcggtgcagaaacacaattgccagtttcattcaga
catttgatgttgccggaaaaaaatttaccctcgacagaattattagatttgcagccgtta
ccagtaaccgctctacgtaattcgttgtatgagagtatatattcaaaaaagtttccacaa
tttaatccaatacaaactcaggtatttaatgcagtttataatacggatgacaatattttc
attggagccccaacaggttcgggtaaaacaacgatagctgaattcgctgttcttcggctt
ttatcgcaaaatcccgatggacgatgcgtttatttagtggcaaaagattcattagcagaa
ctcatatttgcagaatggcagcaaatttttaattgtattttaaacgttaaggttgtttta
ttaactggagaaactagcacagatttaaaacttttggccaaaggtcaaattatcataaca
acggcagaaaaatgggacgttttgtctcgtagatggaaacaaagaaaaaatgttcaaaat
attcaattgtttattgttgatgaacttcaattaatcggaggagaagatggaccagtttta
gaagtcgtgtgctccagaatgagatacatttcatctcaattagagaaacaaataagaatt
gttgccctctcgacttctttggcagatgcccgtgacgtttctcaatggcttggctgtaat
tcgaatgccacctttaattttcatccaagtgtgcgacctgtacccctcgaattgcacgtt
cagggattcaacattactcacaacgcttcgcgtttaatagccatgtcaaagccagttttt
aacaacataatgaaacatagttctcacaaaccggttattgtgtttgtacccacaagaaaa
caggccagaattacagcgattagccttcttacttttgcggcagctgaatctcagccgaac
agattctttcacgctgaagaagaagatattcagccctttttagagagaatgtctgataag
actcttaaagaaacattgattcaaggagtggcttacatacacgaaggtttgactccaaat
gatcacagacttgtggaacaactttttgattctggtgcagtacaaattgcagtcgttacc
agaaatctttgttggggactgaacattcaagctcatcttgttatcattatggacactcaa
ttttacaatggaaaaattcatgcttacgaagattatcctgtcaccgacgttttacaaatg
attggaaaagccaacagacccttagaggacgatgatgctaaatgtgtgttaatgtgtcag
agctctaaaaaagatttttttaaaaaattcttaaacgagtctttacctgtagagagtcat
ttggatcaccgtttacacgatcatttcaatgctgaaatagtcactaaaacaattgaaaac
aaacaagatgccgttgattatttaacatggacatttttatatcgacgtcttactcaaaat
ccaaattattacaatttacaaggagtcactcatcgtcatctgtctgatcatttatcagaa
ttggttgaaacaactcttaacgatttagaacagtcaaaatgtataagtattgaagacgaa
atggattgcatgccgttgaatcttggaatgatagctgcttattattacattaattatacg
actattgaattgttcagcttatcattaaatagcaaaacgaaaattcgaggtttgttggaa
ataatatcttcagcagcggaatatgaagatatacccgtcagacacagggaagacaccatt
ttacgtactttgtcaatgaagttaccgaataaattgaattcaaataccaaatttaatgat
ccacatgtgaaaactaatattttgttacaagctcacctttcaagaatacaacttagccca
gacttacagagagacacggaaataatacttggaaaagctgtgaggttaatacaagcttgt
gttgacgttcttagttcaaatggttggctcgctccagcagtagcagctatggaattggct
caaatggttactcaagccatgtggtcaaaagattcttatttaaaacaattacctcatttc
acatccgaaattataaaaagatgttcggagaaaaatgttgaaaccgtttttgatataatg
gaactcgaggacgatgatcgaataaaacttcttcaattgagcgattctcaaatggtgttg
ttagaacgagaagatgatgtttctggacccgtaatagcaccctttttccctcaaaaaaga
gaagaaggctggtgggtggtcattggtgatcccaaaactaattcattattatccataaaa
agattaacattacaacaaaaagcaaaagtaaaattagattttatagctcctaatccgggt
catcattcctacactttgtattttatgagtgatgcttatttgggatgtgatcaagaatat
aaatttagtataaatgttggtgaatttgaatcgtcaacaaaggacagtacaagtaaacat
tacaatgcttttaaaccatggaaaaattttgacaacaaactataa
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integrated database retrieval system
