Pediculus humanus corporis (human body louse): Phum_PHUM467400
Help
Entry
Phum_PHUM467400 CDS
T01223
Name
(RefSeq) DEAD box ATP-dependent RNA helicase, putative
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Phum_PHUM467400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phu03041
]
Phum_PHUM467400
Enzymes [BR:
phu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Phum_PHUM467400
Spliceosome [BR:
phu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
Phum_PHUM467400
Complex B
Phum_PHUM467400
Complex C
U2 SnRNP specific factors
Phum_PHUM467400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
FabD_helical_ins
Motif
Other DBs
NCBI-GeneID:
8238722
NCBI-ProteinID:
XP_002430222
UniProt:
E0VVS8
LinkDB
All DBs
AA seq
763 aa
AA seq
DB search
MSHKRGGTGIIPGFSYSGFVLPKNDSPHAGAAIPPPTVGFKSTGTGLSKQGYSTMMAISQ
NALSCQTNWGAPKKRAKTEDEYFDEEEEFTYQNNTLEYIPAPGSPSYLEEKNATTRKVDD
DDSEEDPLDAFMEGIDQQFQKDLKKAERNAEMNEKGDNNKGFRDDIDAEDDEESYYRYME
ENPLAGVQNEDSDIELEYDEDGNPIPPAKNKDIDPLPPIDHSCIEYQDFEKNFYVVHDDV
ANLSKSKVEELRKTLGIKVTGPQPPHPVVGFAYFGFDEALMKVIRKSEYTTPTPIQAQAV
PAALSGRDIIGIAKTGSGKTAAFVWPMLIHIMDQKELKPGDGPIGLILAPTRELSQQIYS
EAKKFGKVYNIQVICCYGGGSKWEQSKALENGAEIVVATPGRMIDLIKMKATNLKRVTFL
VLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKKKVERLARVVLTDPIRIVQGDV
GEANEDVIQNVLILPNQAAKFMWLTSHIVEFLSNGSLLIFVTKKVNAEEVANNLKLKEFD
VLLLHGDMDQIERNKVITQFKKKEVSILVATDVAARGLDIPHIKTVVNYDIARDIDTHTH
RIGRTGRAGERGYAYTLVLNQDKEFAGHLVRNLEGANQEVPKSLMDLALQSSWFRKSRFK
SGKGKQLNVGGCGLGFRERPGMGSSVSTTTADLIKKCGPGSDRLSAIKATFKSQYLTQFK
ASSDHTWEHTRNQFDKNVPKNVENTEEDNNKPKRSRKSRWDSS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagccataaacgaggagggacgggaattatacctgggttttcctattctggatttgta
ttgccaaaaaatgattcacctcacgcaggagccgctattcctcctcctactgttggattt
aaaagcactggcactggtttaagcaaacaaggatactcgacaatgatggccattagtcaa
aatgctttaagctgtcagacgaattggggcgctcctaagaagagagcgaaaaccgaagat
gaatattttgacgaagaggaagagtttacataccagaacaacactttagaatacatacct
gctcctggaagtccttcatatttagaagaaaaaaatgctaccactcgtaaagttgatgat
gatgattcagaggaagatcctttagatgctttcatggaaggcatagatcaacaattccaa
aaagatttaaaaaaagctgaaagaaatgcagaaatgaatgaaaaaggagacaacaataaa
ggttttagggatgatattgatgcagaggatgacgaagaatcttattacaggtacatggaa
gaaaatccattagcaggtgttcaaaatgaggattcagatattgaattagaatatgatgaa
gatggaaatcctataccaccagcaaaaaataaagatattgatccacttcctcctattgat
cactcatgcatagaatatcaagattttgaaaaaaatttttatgttgtacatgacgatgta
gcaaatttaagcaagtctaaagttgaagaattaagaaaaacattgggaattaaggtcact
ggtccacagccacctcatcctgttgtaggttttgcttatttcggatttgatgaagcattg
atgaaagtaattagaaagtctgagtacaccactccaacaccgattcaagcccaggctgta
cctgctgctttaagtggaagagatattattggtattgccaaaactggaagtggaaaaacg
gctgcttttgtttggccaatgcttattcacataatggatcaaaaagaattaaaacctgga
gatggtcccattggattaattttagctcctactcgagaattatctcaacagatatattct
gaagcaaaaaaatttggaaaagtttataatattcaagttatttgttgttatggaggtgga
agtaaatgggaacaatccaaagcacttgaaaatggtgcagaaatagtagttgctactcct
ggccgaatgatcgatcttatcaaaatgaaagctactaatttgaaaagagttacattttta
gttttggatgaagcagacagaatgtttgacatgggtttcgaaccgcaagtaagatcaatc
tgtaatcacgttcgtcccgatagacaaacattattattttcggccactttcaaaaaaaag
gtagaacgtttggctcgcgttgttttaacggatccgattagaatcgtacaaggtgacgta
ggggaagcaaacgaagacgtcattcaaaatgtcctcattttacctaatcaagcagcaaaa
tttatgtggcttacaagtcatattgttgaatttttatctaatggtagcttactaattttt
gtcacaaaaaaagttaatgccgaagaagtggcaaacaacttgaagctaaaagaatttgac
gtattattacttcacggtgacatggatcaaattgaaaggaacaaagtaataactcaattt
aaaaaaaaagaagtcagtattttagtggccaccgatgttgcagcgagaggattagacatt
cctcacataaaaacagtcgttaattatgatatagcgagagacatagacactcatactcat
cgaatcggaagaacaggtcgggccggagaaagaggatatgcttatactttagtgttaaat
caagataaagaatttgcaggacatttggtgagaaatttagaaggtgcaaatcaagaagtt
ccaaaaagtttaatggatcttgcacttcagagttcttggttccgaaaatcaagattcaaa
agtggaaaaggaaaacagttaaacgtgggaggatgcggtcttggattcagagagaggcct
ggtatgggaagttcagtgtcaaccaccacagccgatttgataaaaaaatgcggcccagga
tcagatagactgtcagcaataaaagccacatttaaatcacagtatttaactcaatttaaa
gcatcaagtgatcacacttgggagcacacgagaaatcaatttgataaaaatgttcctaaa
aacgttgaaaacacagaagaggataataataagccaaagcgaagcagaaaaagtagatgg
gatagttcatag
DBGET
integrated database retrieval system
