Pediculus humanus corporis (human body louse): Phum_PHUM518520
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Entry
Phum_PHUM518520 CDS
T01223
Name
(RefSeq) TFIIH basal transcription factor complex p52 subunit, putative
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03022
Basal transcription factors
phu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Phum_PHUM518520
09124 Replication and repair
03420 Nucleotide excision repair
Phum_PHUM518520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phu03021
]
Phum_PHUM518520
03400 DNA repair and recombination proteins [BR:
phu03400
]
Phum_PHUM518520
Transcription machinery [BR:
phu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Phum_PHUM518520
DNA repair and recombination proteins [BR:
phu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Phum_PHUM518520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
8233263
NCBI-ProteinID:
XP_002431278
UniProt:
E0VYT4
LinkDB
All DBs
AA seq
467 aa
AA seq
DB search
MGESSRGHRSHIQVKNLRCKYLHEYLQTLPLATLEQLYNHPTTCLAVFRELPQIARHYVS
RLLFVEQPVPQAVIASWISQTHSKEHLTATKVLTDLRVWQEAAIPGGLPGWILNSVFKKN
MKISLLGGGRPWTMSAQLEPDTKPRDIPYLDNYAMERWECVLHYMVGSQAQEGISADAVR
ILLHANLMKRDEEDGSCVITREGFQFLLLDTASQVWYFMLQYLDTVSARNLDLVECLTFL
FQLSFSTLGKDYSTIGMSEGLLVFLQHLREFGLIYQRKRRGGRFYPTRLALNIACGENKS
LQQMNKEGYIIIETNYRVYAYTDSNLQVALLGLFCEMLYRFPNLSVGLITRDSVRQAFKS
GITAEQIVGFLRLHAHPRMIAVGPPTLPPTVVDQIKLWENELNRLVYSDGVLYSQFLSQA
DFEALRDRANELGVLVWENDKKRTMVVTKSGHDDVKKFWKSYSKANS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaagtagccgaggacatcgctcgcatattcaagttaaaaatttacgttgcaaa
taccttcatgaatatcttcaaacgcttccattagcaacattagaacagctttataatcat
cccactacttgtttagcagtttttagagaattacctcaaattgcaagacactatgttagt
agattactgtttgtagaacagcctgtacctcaagcagtaatagcatcatggatatctcaa
actcattctaaagaacatttaacagcgacaaaagttttaacagatttgagagtttggcaa
gaagctgcaataccaggaggtctaccaggatggatattaaattctgtgtttaaaaaaaat
atgaaaatatcattactgggaggaggtagaccatggacaatgtcagctcaattagaaccg
gataccaaacccagagacataccatatttagataattatgcaatggagaggtgggaatgc
gttttacattatatggttggatctcaagctcaagaaggtatttctgctgatgctgttagg
atattactgcatgcaaatctcatgaaaagagacgaggaagatggttcttgcgtaataaca
agagaaggttttcaatttttactcctcgatacagcttctcaagtttggtactttatgctt
cagtatttagatactgtgagtgctagaaatttggatttagttgaatgccttacattttta
tttcaactgagttttagtacattaggaaaagattatagcacaatcggaatgagcgagggc
cttttagtttttttacaacatttaagagaattcggtttgatttatcaaaggaaaagaaga
ggaggaagattttatcctacaagattagctctcaacattgcctgcggtgaaaataaatct
ttacaacagatgaataaagaaggatatataattatagaaacaaattatagggtgtatgct
tacactgattcaaaccttcaggttgcattattgggtttattttgtgagatgctttataga
tttcctaatttatctgtcggattaattacaagagattcagttaggcaagcattcaaaagt
ggaataactgcagaacaaatcgttgggtttttaagattacatgctcatcctagaatgatt
gctgttggacctccgacacttcctccaacagtcgtcgatcaaatcaaattatgggaaaat
gaattgaacagattggtttattcagatggagttttatattctcaattcttgtctcaagct
gatttcgaagcactaagagatcgtgccaacgaattaggagtgttggtatgggaaaatgat
aaaaagcgtacaatggttgttacaaaatctggacacgacgatgttaaaaagttttggaaa
agctattcaaaagcaaacagttga
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