Pediculus humanus corporis (human body louse): Phum_PHUM521680
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Entry
Phum_PHUM521680 CDS
T01223
Name
(RefSeq) Cleavage and polyadenylation specificity factor 100 kDa subunit, putative
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Phum_PHUM521680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM521680
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
Phum_PHUM521680
U7-dependent histone pre-mRNA processing factors
Phum_PHUM521680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
8231712
NCBI-ProteinID:
XP_002431330
UniProt:
E0VYY6
LinkDB
All DBs
AA seq
731 aa
AA seq
DB search
MTSIIKFQAISGAMDESPPCFILQVDEFRFLLDCGWDEKFDQEYMKELKKHVPLIDAVIL
SHPDPLHLGALPYLVGKCSLSCPIYATIPVYKMGQMFMYDLYQSRYNMEEFDLFTLDDVD
AAFDKIIQLKYNQSIAMKGKGYGITITPLPAGHMIGGSIWKIFKVGEEDIIYAVDYNHKK
ERHLNGCELEKIQRPSLLITDAFNATYQQQRRRVRDEKLMTNILQTLRSNGNVLVTVDTA
GRVLELAHMLEQLWRNKESGLLAYSLAFLNNVSYNTVEFAKSQIEWMSEKLMRSFEGARN
NPFQFKYVQLCHSFSELSKVPSPKVVLASTPDMESGFSRELFLQWSSNPLNSIILTSRTS
PGTLARDLIENGGDRIISIEIKKRVKLEGEELEEYFKNEEERREQERENVDVSSDSDDEL
EMIQVSKGRHDFLVKDSKPHSGFFKTNKKQNAMFPFYEHKVKFDDYGEIINPDFYKLEGE
KEKMDDVKDEAMDEEERVEDQEVPTKCISYTKEIMIKAQIQFIDFEGRSDGESIQKIISQ
IRPRRLILIRGTGESTKSLVNIVSKSTDAKIFAPQKKSEVVDATTETYIYQIRLTDQLIS
SLYFQKGKEAEVAWLDAQVLTKNRSADARPSEEEMEIDEELKDEILTLDLLPVEDIPGHE
TSYINELKLSDFKQILNKNNINCEFSGGVLRCCHGSVAVRRHEAGRVILEGCLSEDYYKV
KELLCQQYAIV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgacatccataataaaatttcaagccatatctggagcaatggatgaatctcctccttgc
tttatattgcaggtggatgaatttcgttttttgctcgattgtggttgggatgaaaaattc
gatcaagaatatatgaaagaattaaaaaaacacgtacctcttattgatgcagttatatta
tctcatcctgatccccttcacttgggagctctgccttatttggtaggaaagtgcagtttg
agttgccccatatatgcaaccattccagtctataaaatgggacaaatgttcatgtacgat
ttatatcagtctcgttacaacatggaagaatttgatttgttcaccttggatgatgtggat
gcagcattcgataaaataatacaactgaaatataatcaaagtattgccatgaaaggtaaa
ggctatggaatcaccataactccacttccagccggtcacatgattggtggttccatttgg
aaaatatttaaagtaggcgaagaagatataatatatgctgtggattataatcacaaaaaa
gaaaggcatttgaatggttgtgaattagaaaaaattcaaaggccttcccttctcataact
gatgcttttaatgcaacctatcaacagcaaagaagaagagtcagagatgaaaaattaatg
acaaatatattacaaactctaagaagtaacggaaacgtgttagtaacggttgacacagca
ggtcgtgttttagaacttgcacacatgttagaacaattatggagaaataaagaatccggt
ttattagcttattcattagcatttttaaacaatgtcagttataacacggtcgaatttgca
aaatcacaaatcgaatggatgagtgaaaaattaatgagatccttcgaaggagcaagaaat
aatccatttcaatttaaatacgtacaattatgtcattctttcagcgaattatccaaagtt
ccaagtcccaaagtcgtattggcgagcacgccggatatggaaagcggtttttccagagaa
cttttcctacaatggagttccaatcctttgaacagtattattttaacaagtcgaacatct
ccgggtaccttggctagagatttaattgaaaatggcggagacagaatcatatctatagaa
ataaaaaaaagagtcaaattggagggtgaagaattagaagaatattttaaaaatgaagag
gaaagaagggaacaggaaagggaaaacgtggacgtgtcatcagattcggacgatgaattg
gaaatgattcaagtttcgaaaggtcgccacgattttttagttaaagattcgaaacctcat
tcgggattttttaaaacgaataaaaaacaaaacgccatgtttccattttacgaacacaaa
gttaaattcgacgattacggggaaataataaacccagatttttacaaattggagggggaa
aaagaaaaaatggacgatgttaaagatgaagccatggatgaggaagaaagagtggaagat
caagaagttccgacaaagtgcataagttacacgaaagaaataatgataaaagctcaaata
caattcattgatttcgaagggagatccgacggagaatcgatacaaaaaattataagtcaa
atccgaccgagacgattgatattgatcagaggaactggagaaagtacaaaatctctcgtg
aacatcgtgagcaaatcgacggatgcgaaaatatttgcaccgcaaaaaaaatccgaagtc
gttgatgccacgacggaaacatacatataccaaataaggctcacggatcaattgatatct
tccctgtattttcaaaagggtaaagaagcggaagttgcatggttggacgctcaggtacta
acaaaaaatcgaagtgcggatgctaggccttcggaagaagaaatggaaattgacgaagaa
ttaaaagatgaaattttaacgttggatttattaccagtcgaagacatacccggacacgaa
acatcttacataaacgaacttaaattatcggattttaaacagatattaaataagaacaac
attaattgtgaattttccgggggtgttttaaggtgttgtcacggttcggttgccgtgaga
agacacgaagcgggacgtgtcatactcgagggatgcctttccgaagattattacaaagtt
aaagaattactttgtcaacagtacgccattgtttga
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