Pediculus humanus corporis (human body louse): Phum_PHUM530150
Help
Entry
Phum_PHUM530150 CDS
T01223
Name
(RefSeq) Exosome complex exonuclease RRP42, putative
KO
K12589
exosome complex component RRP42
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Phum_PHUM530150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM530150
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Phum_PHUM530150
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
Phum_PHUM530150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
8235136
NCBI-ProteinID:
XP_002431468
UniProt:
E0VZC4
LinkDB
All DBs
AA seq
290 aa
AA seq
DB search
MAVGCYSESEKIFILHGVEDNFRYDGRTRSEYRPIEVETDVVSHANGSARLRLANTDILV
GVKAEIVKPTIENPDKGKIEFFVDCSANATPAFEKRGGEDLANDLSSALTRAYSAPESLD
LKSLCILPKFQCWKLYVDVLILECGGNLFDAVGLGVKAALRNTFIPRVVAAALDGCDPEL
VISEDPYDCWRLDTSKTPVFVTVMRIGDHCVVDPGAEEEAVSGGGLLVSYGSGSITSLLK
ISGGSLHPITLREMIQLGGSAGECLQDTLERALKEEDSLGPKREKAGFLK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcggatgttatagcgaatcagaaaaaatattcatacttcacggagtcgaggat
aattttcgatatgacggaagaactagaagcgaatataggcctatagaagtagaaactgat
gttgtttctcatgctaacggttcagctcgacttaggttggctaatacagatattcttgtc
ggagtcaaagcagaaattgttaagccaacaattgaaaatcctgataagggaaaaattgaa
ttttttgtcgattgttcagcaaatgcgacacctgcatttgaaaaaagaggcggagaagat
ttagcgaatgatttaagctcagcactgacgagagcatattcagctccagaatcgttagat
ttaaaatcactttgcatattacctaaatttcaatgttggaaactttatgttgatgtactt
atattagaatgtggtggaaatttattcgatgctgtcggattaggagtaaaagctgctttg
agaaatacattcatacctagagttgtcgctgctgctttagacggttgcgatcctgaactt
gtcatatctgaagatccatatgattgttggagacttgatacatccaaaactcctgttttt
gtcacagtcatgaggattggtgatcattgtgttgtcgatccaggcgcagaagaagaagct
gttagcggtggtggacttttagtttcttatggttcaggttcgataacatcattattaaaa
ataagcggtggaagtcttcatccgataacattgagagaaatgattcagttgggtggaagc
gctggagaatgtttacaagatacattagaaagagcattaaaagaagaagattcattagga
cctaaaagagaaaaagctggatttctcaagtaa
DBGET
integrated database retrieval system
