Pediculus humanus corporis (human body louse): Phum_PHUM534200
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Entry
Phum_PHUM534200 CDS
T01223
Name
(RefSeq) tRNA-splicing endonuclease subunit SEN2, putative
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
phu
Pediculus humanus corporis (human body louse)
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phu03016
]
Phum_PHUM534200
Enzymes [BR:
phu01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Phum_PHUM534200
Transfer RNA biogenesis [BR:
phu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
Phum_PHUM534200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
8235269
NCBI-ProteinID:
XP_002431524
UniProt:
E0VZI0
LinkDB
All DBs
AA seq
334 aa
AA seq
DB search
MEFKKPKLKKQSLRIKEASSLIDKNQLIGVFNGLQIVITNQNLINCFPCYNLNKGDIPKI
ITEQQYQNESKWNTVNEITYRNSFFDDHCSSINSVNKFLLEAINDDINTQLQWQSWKANL
DNNLNKDFHKKRSCIIHNNVSRDNLLEFTEDSSIEVDEKFQKRINEIIDNKLIIQVKDYK
KSNEKVIVINILNDNLSPSLISIENFKARLMRRSYPMIESLLLNFEETLFLNYALNYFKV
HNENGVKLSIDELWEKFNKSQWNFFERYVIYHYYRTKGWIVKSGIKYGGDYLLYKEGPLY
SHASYLIKIFNPKQVFTWTKFLAINRLVETFNKV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaaaaaacctaaattaaaaaaacaatctttaagaattaaagaagcgtcttct
ctcattgacaaaaatcaactaataggagtttttaacggattacaaattgttataacaaat
caaaatctaattaattgttttccttgttataatttaaataaaggtgatatacccaaaatt
attacagagcaacaataccaaaatgaatcaaaatggaacactgtaaacgaaatcacatat
cgaaattcatttttcgatgatcattgttcatcgataaatagtgtcaataagtttttactg
gaagcaataaatgatgatattaatacacaattacaatggcaatcatggaaagcaaacctt
gataataatttaaacaaagactttcacaaaaaaagaagttgtattatacataataatgtt
agccgagataatttattagaatttactgaagacagtagcattgaagttgatgaaaagttt
caaaaaagaataaatgaaattatagacaataaacttataatacaggtaaaagattataaa
aaaagtaatgaaaaagttatagtaattaatatactcaatgacaatttatcaccttcactt
atttccattgaaaattttaaagccagactaatgaggagatcatatccgatgatagaaagt
ttattattaaattttgaagaaacactttttttgaattatgcattaaattattttaaagtt
cacaatgaaaatggtgttaaattaagtattgatgaattatgggaaaaatttaataagtct
caatggaactttttcgaaagatatgtcatttaccattattatagaacaaaaggttggatt
gttaaatctggtataaaatatggtggagattatttactgtataaagaaggacctctatac
agtcatgcaagttatttgataaaaatttttaatcccaaacaagtttttacatggacaaaa
tttttggcaatcaacagattagtcgaaacatttaataaggtataa
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