Pediculus humanus corporis (human body louse): Phum_PHUM565400
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Entry
Phum_PHUM565400 CDS
T01223
Name
(RefSeq) DEAD box ATP-dependent RNA helicase, putative
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Phum_PHUM565400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phu03041
]
Phum_PHUM565400
03009 Ribosome biogenesis [BR:
phu03009
]
Phum_PHUM565400
Enzymes [BR:
phu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Phum_PHUM565400
Spliceosome [BR:
phu03041
]
Complex A
U1 snRNP components
U1 related factors
Phum_PHUM565400
Complex B
Phum_PHUM565400
Ribosome biogenesis [BR:
phu03009
]
Eukaryotic type
Pre-60S particles
Helicases
Phum_PHUM565400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Polyoma_lg_T_C
Motif
Other DBs
NCBI-GeneID:
8234804
NCBI-ProteinID:
XP_002432023
UniProt:
E0W0Y0
LinkDB
All DBs
AA seq
755 aa
AA seq
DB search
MALINFHVAIFLELSFLRLNGFRNLKSPKDYLHGSKKIFWNNNQNNMNSFQYQQKPFVTY
NKFQKVPQNMKAKFYDFNKESRLKQCSNEDGKENTESRALLPFTKNFYIPHPNVLKRTDD
EVNEYRELMEITVNGKNVPNPNQTFEESNFPANVMAVIKKQGFLKPTAIQAQGWPIALSG
RDMVGIAQTGSGKTLAYALPATVHITNQKPLSKGDGPIALVLAPTRELAQQIQSVAKDFG
ASCSIRNTCIFGGAPKGSQARDLERGVEIVIATPGRLIDFLDKGTTNLRRCTYLVLDEAD
RMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQTLAEDFLHDYIQINIGSLSLAANH
NIRQHVEVMQDSEKEGRLTNLLRDIGGDRNNKILIFVETKKKVDDIARLVKQEGFPAICM
HGDKSQQERDHVLNEFRSGKCAVLVATDVAARGKIRHYVHRIGRTGRSSQMGTAFTFFTP
QNARQAKGLVAVLEEASQPINPKVTELLAATTKGPTPEPTNNYGNINQIWQPNSPVLPQE
NHYSGKYRTVQNENGFKGRMHNNTGSEIYQKIPTRISNCNGNGINNNNSYLQKPQNLNLN
QANKNTPFGPQINYDSNIYNNQQCGGGQNFQNNHRPPVNHDFMRSQRNNFQNRPRMRSNV
MKNQPNNNGDISMANGLNSQHVHPWPTNGQISALPPPPPYFLPGTDSSMSFNGKYFVAPT
NAMTRQNNPCGNQYQQFQYPQVPYFPFNQPAAVQQ
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggctctcataaattttcatgttgcaattttcttagagttaagctttttacgcttgaat
ggttttagaaatctgaaaagtcctaaagattacttgcatggttcaaaaaaaatattttgg
aacaataaccagaacaatatgaatagttttcaatatcagcaaaagccttttgtcacatat
aataaattccaaaaagtaccacaaaatatgaaggccaagttttatgattttaataaagaa
tctagattgaagcaatgctccaatgaagatggcaaggaaaacaccgaatctagggcttta
ttgcctttcaccaaaaatttttacattccacatcccaatgtattaaaacgaactgatgat
gaagttaatgaatatagagaattaatggaaataacagttaatggaaaaaatgttccaaac
ccaaatcaaacttttgaagaaagcaattttccagctaatgtcatggctgtaataaaaaaa
caaggctttttgaaaccgactgcaattcaagcacaaggatggcctattgcccttagtggt
agagatatggtaggcattgcacagactggatctggaaaaactttggcttatgctctacca
gctacagtacacattactaatcaaaaaccattgtcaaaaggagatggtccaatagcactt
gttcttgctcccacaagggaattagcacagcaaatccaatctgttgcaaaagattttggt
gcatcatgttcaattagaaacacatgcatatttggaggggctcctaagggatctcaagcg
cgtgacttagagaggggtgtcgaaattgttattgcaacacccggccgccttattgacttt
ttggacaaaggtactacaaatctaagaagatgcacatatttagttttggatgaagctgat
cgtatgttagacatgggttttgaacctcaaattcgaaaaattattgagcaaattaggcct
gacaggcaagttctaatgtggtccgctacatggccaaaggaagtacaaaccttggctgaa
gactttttacatgattatattcaaattaacattggatctttatctttggctgctaaccat
aatatccgtcaacatgttgaggttatgcaggactctgaaaaagaaggaagattaaccaac
ttgttacgagacatcggaggtgatagaaataataaaattttaattttcgttgaaactaaa
aagaaagttgatgatatagcacgacttgttaagcaagaaggatttcctgccatttgtatg
cacggtgacaaatctcaacaagaaagagatcacgttctcaacgagtttagaagtggaaaa
tgtgcggtactcgttgctaccgatgtagctgctagaggcaagattagacattacgtgcat
cgtattggtcgaacggggcgttcttctcaaatgggtaccgcttttacatttttcaccccg
caaaatgctcgtcaagctaaaggattggtagccgttttagaagaagcttctcaacccatt
aatccaaaagtaacggaacttttggcagctaccactaaaggcccgactcccgaacctact
aataactatggaaacattaatcaaatttggcaaccgaacagccctgtgttacctcaagaa
aaccattactccggaaagtaccggaccgttcaaaatgaaaacggatttaagggaagaatg
cacaataataccggttcggaaatttatcaaaaaattccaactcgtattagcaattgcaac
ggcaacggcatcaacaacaataacagttatttacagaaaccgcaaaatcttaatttgaat
caagcaaacaaaaacacacctttcggtccgcaaattaattacgacagtaacatatacaac
aatcaacaatgcggcggtggtcaaaattttcaaaataatcaccgaccgccggtcaatcac
gattttatgagaagtcaaagaaacaattttcaaaacaggccacgaatgagaagcaacgtc
atgaaaaatcaacccaacaacaacggtgatatatccatggcgaacggattgaattcgcag
cacgttcatccgtggccgaccaacggtcaaatcagtgctttgccaccaccaccaccatat
ttcttgccaggtacggattcgtctatgtcgttcaacggaaagtatttcgtggcacccacg
aacgcgatgacgcgacaaaataatccatgcggaaatcaatatcaacaatttcaatatccg
caagtaccgtattttccatttaatcaaccggctgcagttcaacagtaa
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