Pediculus humanus corporis (human body louse): Phum_PHUM565410
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Entry
Phum_PHUM565410 CDS
T01223
Name
(RefSeq) DEAD box ATP-dependent RNA helicase, putative
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Phum_PHUM565410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phu03041
]
Phum_PHUM565410
03009 Ribosome biogenesis [BR:
phu03009
]
Phum_PHUM565410
Enzymes [BR:
phu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Phum_PHUM565410
Spliceosome [BR:
phu03041
]
Complex A
U1 snRNP components
U1 related factors
Phum_PHUM565410
Complex B
Phum_PHUM565410
Ribosome biogenesis [BR:
phu03009
]
Eukaryotic type
Pre-60S particles
Helicases
Phum_PHUM565410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
8234805
NCBI-ProteinID:
XP_002432024
UniProt:
E0W0Y1
LinkDB
All DBs
AA seq
610 aa
AA seq
DB search
MKAIKMNTKRHKKAISQMAYRQGSKPEVESNKRQLDLAAHYVCLLFGLIISFLLLTLIGL
IMSFFVLCFCNNIFFLSLLVVRYCRNSVKNSLIPSRIWPQLKMAFTGKRKLSVKKSPKFN
RYDENGHFPSKRPRFGNRRDFDYPGQNLGKINWDEVTLKPFEKNFYSPHPDVLKRSKQEI
QDFLNKNEIVIKGKNCPAPIFSFEETGLADDVINIVRKLNYFAPTPIQSQGWPIALSGQN
MVGIARTGSGKTLGFVLPAVIHIQHQPKLERGDGPIALVLAPTRELVQQTQNVAIPFARA
SGIRSVAVYGGSDKYGQDRHLRNGTEICVATPGRLLDFLNSGTTNLERCTYLVLDEADRM
FDMGFEPQIRSIIDQIRPDRQVLMWSATWPKEIKRLAEEYLKDYIQLNVGSQELTANPNI
NQIVHVCQSERDKKKLQNVLKEIGEQDEIKTLIFTATKQKSDSIAFWLQDLGYRCDSLHG
GKTQKNRDFILRGRIKILVATDVAARGLDVSDIRYVINYDYPNNMEDYIHRIGRTGRHNA
TGTSYTFLTDEDASKAGDLISVLREANQNVDPDLENLAMSAARPKKGYYYYYYCYCCLTV
VEFPSLFKKD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctataaaaatgaatacaaaaaggcataagaaggcaatttcgcaaatggcttac
aggcaaggaagtaaaccggaagtggaatcgaacaaaagacaattagatcttgctgcgcac
tatgtatgtttattgtttggtttgataatttcttttttattattaacgttgattggcttg
ataatgtccttttttgttttgtgtttttgtaataatattttttttttatcacttcttgtt
gtaaggtattgccggaattcagttaaaaattccctaattccatctaggatctggccgcaa
ttaaaaatggcatttacaggaaaaaggaaattgagtgtgaaaaaaagtcccaaatttaac
agatatgatgaaaatggtcactttccatccaaaagaccaaggtttggaaatcgaagggat
tttgactatcccggtcaaaacttgggaaaaatcaattgggatgaagtgacgttaaagcca
tttgaaaaaaatttttattctcctcatcctgatgtattaaaaaggtctaagcaggaaata
caagactttttaaataaaaatgaaattgttataaaaggaaaaaattgtcctgctccgatt
ttttctttcgaagaaaccggattagcagatgatgtaattaatattgtaaggaaattaaat
tattttgcaccgacgcctattcagtctcaaggctggcccatagcactgagtgggcaaaat
atggttggaatagctcgtactggatcggggaaaacattagggtttgttttacctgcggtt
attcacattcagcatcaaccaaaattggaaagaggagatggtcccatagctttagtttta
gctccgacgagagaattagttcagcaaactcaaaatgttgcaattcctttcgcgagagct
tccggtataagatcggtagccgtgtacggtggctcagataaatacggccaggataggcat
ttgagaaacgggaccgagatttgtgtggccacacccggaagactcttggattttttaaat
tcgggaactacgaatttggaaaggtgtacatatttagtattagatgaagctgacagaatg
tttgacatgggtttcgaaccacaaatcagatcaatcattgatcaaatccggcccgatagg
caagtgttgatgtggtccgcgacatggccgaaagaaataaaacgtttagccgaagaatat
ttaaaagattacatacagttaaatgtaggatcccaggaattgacggccaatccaaacatt
aatcaaattgttcacgtgtgtcaaagcgagcgtgacaagaaaaaattgcaaaatgttttg
aaggaaattggagagcaagacgaaattaaaactttaatttttactgcaaccaaacagaaa
tctgatagtattgctttttggctccaagatctcggataccgatgtgattctttgcacggt
ggtaaaacgcaaaaaaatagagatttcattctgcgaggtagaataaaaatattggtggca
acggatgtagcagccagaggtttagacgtttccgatattaggtatgtcattaattacgat
tatcctaacaatatggaagattatattcacagaataggacgaacgggacgacacaacgcg
accggaacgtcgtacacttttctcacggatgaagatgcgagcaaagcgggagatttaata
tccgttttacgggaagccaatcaaaacgttgatccggatttagaaaatttagccatgagc
gctgcgaggcctaaaaaaggttattattattattattattgttactgttgtcttactgtt
gtcgagtttccaagtttattcaaaaaagattaa
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